RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-209ENST00000580158 TMX4Q9H1E5 349 aaPredicted RBP8.24□□□□□ -1.09
KPNB1-209ENST00000580158 SLC52A2Q9HAB3 445 aa8.24□□□□□ -1.09
KPNB1-209ENST00000580158 CDHR2Q9BYE9 1310 aa8.24□□□□□ -1.09
KPNB1-209ENST00000580158 KLRG2A4D1S0 409 aaPredicted RBP8.23□□□□□ -1.09
KPNB1-209ENST00000580158 H7C1D1 291 aa8.23□□□□□ -1.09
KPNB1-209ENST00000580158 GPR25O00155 361 aa8.23□□□□□ -1.09
KPNB1-209ENST00000580158 TBC1D8O95759 1140 aa8.23□□□□□ -1.09
KPNB1-209ENST00000580158 DNAJB2P25686 324 aa8.23□□□□□ -1.09
KPNB1-209ENST00000580158 IL6STP40189 918 aaPredicted RBP8.23□□□□□ -1.09
KPNB1-209ENST00000580158 TPRNQ4KMQ1 711 aa8.23□□□□□ -1.09
KPNB1-209ENST00000580158 NOM1Q5C9Z4 860 aaKnown RBP8.23□□□□□ -1.09
KPNB1-209ENST00000580158 TEX13AQ9BXU3 409 aaPredicted RBP8.23□□□□□ -1.09
KPNB1-209ENST00000580158 COL4A5P29400 1685 aa8.22□□□□□ -1.09
KPNB1-209ENST00000580158 PPIP5K2O43314 1243 aa8.22□□□□□ -1.09
KPNB1-209ENST00000580158 FKTNO75072 461 aa8.22□□□□□ -1.09
KPNB1-209ENST00000580158 GTF2E1P29083 439 aaPredicted RBP8.22□□□□□ -1.09
KPNB1-209ENST00000580158 GMPSP49915 693 aaPredicted RBP8.22□□□□□ -1.09
KPNB1-209ENST00000580158 PTGDRQ13258 359 aa8.22□□□□□ -1.09
KPNB1-209ENST00000580158 KRT26Q7Z3Y9 468 aa8.22□□□□□ -1.09
KPNB1-209ENST00000580158 TTC5Q8N0Z6 440 aa8.22□□□□□ -1.09
KPNB1-209ENST00000580158 DCPSQ96C86 337 aaKnown RBP8.22□□□□□ -1.09
KPNB1-209ENST00000580158 VPS33BQ9H267 617 aa8.22□□□□□ -1.09
KPNB1-209ENST00000580158 TSHZ2Q9NRE2 1034 aa8.22□□□□□ -1.09
KPNB1-209ENST00000580158 ZNF652Q9Y2D9 606 aa8.22□□□□□ -1.09
KPNB1-209ENST00000580158 UBR2Q8IWV8 1755 aa8.22□□□□□ -1.09
KPNB1-209ENST00000580158 NPC1L1Q9UHC9 1359 aa8.22□□□□□ -1.09
KPNB1-209ENST00000580158 CUL9Q8IWT3 2517 aa8.21□□□□□ -1.1
KPNB1-209ENST00000580158 LCE2BO14633 110 aa8.21□□□□□ -1.1
KPNB1-209ENST00000580158 HIRAP54198 1017 aaPredicted RBP8.21□□□□□ -1.1
KPNB1-209ENST00000580158 CXCL9Q07325 125 aa8.21□□□□□ -1.1
KPNB1-209ENST00000580158 TNIP1Q15025 636 aa8.21□□□□□ -1.1
KPNB1-209ENST00000580158 POLKQ9UBT6 870 aa8.21□□□□□ -1.1
KPNB1-209ENST00000580158 CNOT7Q9UIV1 285 aaKnown RBP8.21□□□□□ -1.1
KPNB1-209ENST00000580158 ZNRF3Q9ULT6 936 aa8.21□□□□□ -1.1
KPNB1-209ENST00000580158 MKI67P46013 3256 aaKnown RBP8.21□□□□□ -1.1
KPNB1-209ENST00000580158 SZT2Q5T011 3432 aa8.2□□□□□ -1.1
KPNB1-209ENST00000580158 H0YGN5 161 aa8.2□□□□□ -1.1
KPNB1-209ENST00000580158 CAMTA2O94983 1202 aa8.2□□□□□ -1.1
KPNB1-209ENST00000580158 EN2P19622 333 aaPredicted RBP8.2□□□□□ -1.1
KPNB1-209ENST00000580158 KMT5BQ4FZB7 885 aa8.2□□□□□ -1.1
KPNB1-209ENST00000580158 CLEC4GQ6UXB4 293 aa8.2□□□□□ -1.1
KPNB1-209ENST00000580158 DZIP3Q86Y13 1208 aaKnown RBP8.2□□□□□ -1.1
KPNB1-209ENST00000580158 CEP290O15078 2479 aa8.19□□□□□ -1.1
KPNB1-209ENST00000580158 TNNT2P45379 298 aaPredicted RBP8.19□□□□□ -1.1
KPNB1-209ENST00000580158 NEUROD1Q13562 356 aa8.19□□□□□ -1.1
KPNB1-209ENST00000580158 AOC3Q16853 763 aa8.19□□□□□ -1.1
KPNB1-209ENST00000580158 BLOC1S3Q6QNY0 202 aa8.19□□□□□ -1.1
KPNB1-209ENST00000580158 RASAL3Q86YV0 1011 aa8.19□□□□□ -1.1
KPNB1-209ENST00000580158 SUPT20HQ8NEM7 779 aa8.19□□□□□ -1.1
KPNB1-209ENST00000580158 TRPM4Q8TD43 1214 aa8.19□□□□□ -1.1
KPNB1-209ENST00000580158 KCNV2Q8TDN2 545 aa8.19□□□□□ -1.1
KPNB1-209ENST00000580158 RPGRQ92834 1020 aaKnown RBP8.19□□□□□ -1.1
KPNB1-209ENST00000580158 LGR6Q9HBX8 967 aa8.19□□□□□ -1.1
KPNB1-209ENST00000580158 TRIM17Q9Y577 477 aa8.19□□□□□ -1.1
KPNB1-209ENST00000580158 SNED1Q8TER0 1413 aa8.19□□□□□ -1.1
KPNB1-209ENST00000580158 FAM177BA6PVY3 158 aa8.18□□□□□ -1.1
KPNB1-209ENST00000580158 RNMTO43148 476 aaKnown RBP8.18□□□□□ -1.1
KPNB1-209ENST00000580158 SLC19A1P41440 591 aa8.18□□□□□ -1.1
KPNB1-209ENST00000580158 DLK2Q6UY11 383 aa8.18□□□□□ -1.1
KPNB1-209ENST00000580158 SULF1Q8IWU6 871 aa8.18□□□□□ -1.1
KPNB1-209ENST00000580158 TESK2Q96S53 571 aa8.18□□□□□ -1.1
KPNB1-209ENST00000580158 TMEM134Q9H6X4 195 aa8.18□□□□□ -1.1
KPNB1-209ENST00000580158 NIP7Q9Y221 180 aaKnown RBP eCLIP8.18□□□□□ -1.1
KPNB1-209ENST00000580158 ADGRG1Q9Y653 693 aa8.18□□□□□ -1.1
KPNB1-209ENST00000580158 RCCD1A6NED2 376 aa8.17□□□□□ -1.1
KPNB1-209ENST00000580158 RNF223E7ERA6 249 aa8.17□□□□□ -1.1
KPNB1-209ENST00000580158 TCERG1O14776 1098 aaKnown RBP8.17□□□□□ -1.1
KPNB1-209ENST00000580158 RAD17O75943 681 aa8.17□□□□□ -1.1
KPNB1-209ENST00000580158 TM4SF4P48230 202 aa8.17□□□□□ -1.1
KPNB1-209ENST00000580158 FKBP1BP68106 108 aa8.17□□□□□ -1.1
KPNB1-209ENST00000580158 SREBF2Q12772 1141 aa8.17□□□□□ -1.1
KPNB1-209ENST00000580158 CDCA8Q53HL2 280 aa8.17□□□□□ -1.1
KPNB1-209ENST00000580158 ZNF787Q6DD87 383 aa8.17□□□□□ -1.1
KPNB1-209ENST00000580158 COL25A1Q9BXS0 654 aaPredicted RBP8.17□□□□□ -1.1
KPNB1-209ENST00000580158 MRC1P22897 1456 aa8.17□□□□□ -1.1
KPNB1-209ENST00000580158 ADM5C9JUS6 153 aa8.16□□□□□ -1.1
KPNB1-209ENST00000580158 PPEF1O14829 653 aaPredicted RBP8.16□□□□□ -1.1
KPNB1-209ENST00000580158 ACTN4O43707 911 aaKnown RBP8.16□□□□□ -1.1
KPNB1-209ENST00000580158 A1BGP04217 495 aa8.16□□□□□ -1.1
KPNB1-209ENST00000580158 SULT6B1Q6IMI4 303 aa8.16□□□□□ -1.1
KPNB1-209ENST00000580158 DPF3Q92784 378 aa8.16□□□□□ -1.1
KPNB1-209ENST00000580158 DPF2Q92785 391 aa8.16□□□□□ -1.1
KPNB1-209ENST00000580158 RBM17Q96I25 401 aaKnown RBP8.16□□□□□ -1.1
KPNB1-209ENST00000580158 SIN3AQ96ST3 1273 aa8.16□□□□□ -1.1
KPNB1-209ENST00000580158 NYXQ9GZU5 481 aa8.16□□□□□ -1.1
KPNB1-209ENST00000580158 HEG1Q9ULI3 1381 aa8.16□□□□□ -1.1
KPNB1-209ENST00000580158 COL6A3P12111 3177 aa8.16□□□□□ -1.1
KPNB1-209ENST00000580158 ALDH1A1P00352 501 aa8.15□□□□□ -1.1
KPNB1-209ENST00000580158 SLC4A8Q2Y0W8 1093 aa8.15□□□□□ -1.1
KPNB1-209ENST00000580158 CRY2Q49AN0 593 aa8.15□□□□□ -1.1
KPNB1-209ENST00000580158 TBC1D10BQ4KMP7 808 aaPredicted RBP8.15□□□□□ -1.1
KPNB1-209ENST00000580158 RBM26Q5T8P6 1007 aaKnown RBP8.15□□□□□ -1.1
KPNB1-209ENST00000580158 OTOP1Q7RTM1 612 aa8.15□□□□□ -1.1
KPNB1-209ENST00000580158 NBPF11Q86T75 865 aa8.15□□□□□ -1.1
KPNB1-209ENST00000580158 AEBP1Q8IUX7 1158 aa8.15□□□□□ -1.1
KPNB1-209ENST00000580158 CRAMP1Q96RY5 1269 aa8.15□□□□□ -1.1
KPNB1-209ENST00000580158 CFHR5Q9BXR6 569 aa8.15□□□□□ -1.1
KPNB1-209ENST00000580158 PTPN22Q9Y2R2 807 aa8.15□□□□□ -1.1
KPNB1-209ENST00000580158 A0A0C4DFX4 3053 aa8.15□□□□□ -1.11
KPNB1-209ENST00000580158 NUP98P52948 1817 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms