RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 EAPPQ56P03 285 aaPredicted RBP11.78□□□□□ -0.52
MSI2-209ENST00000579483 KANK3Q6NY19 840 aa11.78□□□□□ -0.52
MSI2-209ENST00000579483 PNMA2Q9UL42 364 aa11.78□□□□□ -0.52
MSI2-209ENST00000579483 FKBP15Q5T1M5 1219 aa11.77□□□□□ -0.52
MSI2-209ENST00000579483 TBCAO75347 108 aaKnown RBP11.77□□□□□ -0.52
MSI2-209ENST00000579483 GNA11P29992 359 aa11.77□□□□□ -0.52
MSI2-209ENST00000579483 MNS1Q8NEH6 495 aa11.77□□□□□ -0.52
MSI2-209ENST00000579483 ZNF592Q92610 1267 aa11.77□□□□□ -0.52
MSI2-209ENST00000579483 DCPSQ96C86 337 aaKnown RBP11.77□□□□□ -0.52
MSI2-209ENST00000579483 UPF3BQ9BZI7 483 aaKnown RBP11.77□□□□□ -0.52
MSI2-209ENST00000579483 NUP62CLQ9H1M0 184 aa11.77□□□□□ -0.52
MSI2-209ENST00000579483 BICC1Q9H694 974 aaKnown RBP11.77□□□□□ -0.52
MSI2-209ENST00000579483 ERLIN2O94905 339 aa11.77□□□□□ -0.53
MSI2-209ENST00000579483 TFCP2Q12800 502 aa11.77□□□□□ -0.53
MSI2-209ENST00000579483 SULF1Q8IWU6 871 aa11.77□□□□□ -0.53
MSI2-209ENST00000579483 FERMT2Q96AC1 680 aa11.77□□□□□ -0.53
MSI2-209ENST00000579483 SLC26A6Q9BXS9 759 aa11.77□□□□□ -0.53
MSI2-209ENST00000579483 UBA5Q9GZZ9 404 aa11.77□□□□□ -0.53
MSI2-209ENST00000579483 EIF5P55010 431 aaKnown RBP11.76□□□□□ -0.53
MSI2-209ENST00000579483 RBM25P49756 843 aaKnown RBP11.76□□□□□ -0.53
MSI2-209ENST00000579483 EIF4A1P60842 406 aaKnown RBP11.76□□□□□ -0.53
MSI2-209ENST00000579483 ABCC3O15438 1527 aa11.76□□□□□ -0.53
MSI2-209ENST00000579483 ROBO2Q9HCK4 1378 aa11.76□□□□□ -0.53
MSI2-209ENST00000579483 PDE1AP54750 535 aa11.76□□□□□ -0.53
MSI2-209ENST00000579483 NAPAP54920 295 aa11.76□□□□□ -0.53
MSI2-209ENST00000579483 GSE1Q14687 1217 aa11.76□□□□□ -0.53
MSI2-209ENST00000579483 HELLSQ9NRZ9 838 aa11.76□□□□□ -0.53
MSI2-209ENST00000579483 CTAGE5O15320 804 aa11.75□□□□□ -0.53
MSI2-209ENST00000579483 MSL1Q68DK7 614 aa11.75□□□□□ -0.53
MSI2-209ENST00000579483 GTPBP4Q9BZE4 634 aaKnown RBP11.75□□□□□ -0.53
MSI2-209ENST00000579483 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
MSI2-209ENST00000579483 SEPT11Q9NVA2 429 aaKnown RBP11.75□□□□□ -0.53
MSI2-209ENST00000579483 KLF18A0A0U1RQI7 1052 aa11.75□□□□□ -0.53
MSI2-209ENST00000579483 GCKRQ14397 625 aa11.75□□□□□ -0.53
MSI2-209ENST00000579483 GRIPAP1Q4V328 841 aa11.75□□□□□ -0.53
MSI2-209ENST00000579483 TEKT1Q969V4 418 aa11.75□□□□□ -0.53
MSI2-209ENST00000579483 BACH2Q9BYV9 841 aa11.75□□□□□ -0.53
MSI2-209ENST00000579483 RBM28Q9NW13 759 aaKnown RBP11.75□□□□□ -0.53
MSI2-209ENST00000579483 MAP3K4Q9Y6R4 1608 aa11.75□□□□□ -0.53
MSI2-209ENST00000579483 CAVIN1Q6NZI2 390 aaKnown RBP11.75□□□□□ -0.53
MSI2-209ENST00000579483 ARGLU1Q9NWB6 273 aaPredicted RBP11.75□□□□□ -0.53
MSI2-209ENST00000579483 FBXO3Q9UK99 471 aa11.75□□□□□ -0.53
MSI2-209ENST00000579483 ANAPC15P60006 121 aa11.75□□□□□ -0.53
MSI2-209ENST00000579483 SLC4A8Q2Y0W8 1093 aa11.75□□□□□ -0.53
MSI2-209ENST00000579483 USP6P35125 1406 aa11.75□□□□□ -0.53
MSI2-209ENST00000579483 A0A1B0GUL7 405 aa11.74□□□□□ -0.53
MSI2-209ENST00000579483 DKC1O60832 514 aaKnown RBP eCLIP11.74□□□□□ -0.53
MSI2-209ENST00000579483 ZBED4O75132 1171 aa11.74□□□□□ -0.53
MSI2-209ENST00000579483 SYCP3Q8IZU3 236 aa11.74□□□□□ -0.53
MSI2-209ENST00000579483 AGLP35573 1532 aa11.74□□□□□ -0.53
MSI2-209ENST00000579483 NUCB1Q02818 461 aa11.74□□□□□ -0.53
MSI2-209ENST00000579483 CCDC174Q6PII3 467 aa11.74□□□□□ -0.53
MSI2-209ENST00000579483 PA2G4Q9UQ80 394 aaKnown RBP11.74□□□□□ -0.53
MSI2-209ENST00000579483 BBOX1O75936 387 aa11.74□□□□□ -0.53
MSI2-209ENST00000579483 CCT2P78371 535 aaKnown RBP11.74□□□□□ -0.53
MSI2-209ENST00000579483 IRX3P78415 501 aaPredicted RBP11.74□□□□□ -0.53
MSI2-209ENST00000579483 HEATR3Q7Z4Q2 680 aa11.74□□□□□ -0.53
MSI2-209ENST00000579483 ERCC4Q92889 916 aaPredicted RBP11.74□□□□□ -0.53
MSI2-209ENST00000579483 NOD1Q9Y239 953 aa11.74□□□□□ -0.53
MSI2-209ENST00000579483 MAP3K9P80192 1104 aa11.74□□□□□ -0.53
MSI2-209ENST00000579483 ADGRL3Q9HAR2 1447 aa11.74□□□□□ -0.53
MSI2-209ENST00000579483 MAP3K15Q6ZN16 1313 aa11.74□□□□□ -0.53
MSI2-209ENST00000579483 PARP1P09874 1014 aaKnown RBP11.74□□□□□ -0.53
MSI2-209ENST00000579483 CRKLP46109 303 aaKnown RBP11.74□□□□□ -0.53
MSI2-209ENST00000579483 ZSCAN16Q9H4T2 348 aaPredicted RBP11.74□□□□□ -0.53
MSI2-209ENST00000579483 SPC25Q9HBM1 224 aa11.74□□□□□ -0.53
MSI2-209ENST00000579483 ERBB3P21860 1342 aa11.73□□□□□ -0.53
MSI2-209ENST00000579483 FAM114A1Q8IWE2 563 aa11.73□□□□□ -0.53
MSI2-209ENST00000579483 MIGA1Q8NAN2 632 aa11.73□□□□□ -0.53
MSI2-209ENST00000579483 BICD1Q96G01 975 aa11.73□□□□□ -0.53
MSI2-209ENST00000579483 CFAP65Q6ZU64 1925 aaKnown RBP11.73□□□□□ -0.53
MSI2-209ENST00000579483 PCCAP05165 728 aaPredicted RBP11.73□□□□□ -0.53
MSI2-209ENST00000579483 RAB3GAP1Q15042 981 aa11.73□□□□□ -0.53
MSI2-209ENST00000579483 GIGYF1O75420 1035 aaPredicted RBP11.73□□□□□ -0.53
MSI2-209ENST00000579483 MRE11P49959 708 aa11.73□□□□□ -0.53
MSI2-209ENST00000579483 CTSWP56202 376 aa11.73□□□□□ -0.53
MSI2-209ENST00000579483 USPL1Q5W0Q7 1092 aa11.73□□□□□ -0.53
MSI2-209ENST00000579483 DCTPP1Q9H773 170 aa11.73□□□□□ -0.53
MSI2-209ENST00000579483 PER1O15534 1290 aaPredicted RBP11.73□□□□□ -0.53
MSI2-209ENST00000579483 TRAK2O60296 914 aa11.73□□□□□ -0.53
MSI2-209ENST00000579483 CCDC93Q567U6 631 aa11.73□□□□□ -0.53
MSI2-209ENST00000579483 CCDC181Q5TID7 509 aa11.73□□□□□ -0.53
MSI2-209ENST00000579483 CEP85Q6P2H3 762 aa11.73□□□□□ -0.53
MSI2-209ENST00000579483 ZBTB38Q8NAP3 1195 aaPredicted RBP11.73□□□□□ -0.53
MSI2-209ENST00000579483 GOPCQ9HD26 462 aa11.73□□□□□ -0.53
MSI2-209ENST00000579483 SYNMO15061 1565 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 ADRA2BP18089 450 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 TSPYL6Q8N831 410 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 SMCR8Q8TEV9 937 aaPredicted RBP11.72□□□□□ -0.53
MSI2-209ENST00000579483 IDEP14735 1019 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 MAP3K11Q16584 847 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 DALRD3Q5D0E6 543 aaKnown RBP11.72□□□□□ -0.53
MSI2-209ENST00000579483 SLC27A3Q5K4L6 730 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 ANO10Q9NW15 660 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 RMND1Q9NWS8 449 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 MBD4O95243 580 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 SERPINB2P05120 415 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 LIG1P18858 919 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 LEMD3Q9Y2U8 911 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 RBM8AQ9Y5S9 174 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms