RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 CCT2P78371 535 aaKnown RBP5.78□□□□□ -1.48
NF1-219ENST00000579081 ST5P78524 1137 aa5.78□□□□□ -1.48
NF1-219ENST00000579081 DEUP1Q05D60 604 aa5.78□□□□□ -1.48
NF1-219ENST00000579081 SNW1Q13573 536 aaKnown RBP5.78□□□□□ -1.48
NF1-219ENST00000579081 STX1AQ16623 288 aa5.78□□□□□ -1.48
NF1-219ENST00000579081 ATRIPQ8WXE1 791 aa5.78□□□□□ -1.48
NF1-219ENST00000579081 CDCA7LQ96GN5 454 aa5.78□□□□□ -1.48
NF1-219ENST00000579081 TRIM7Q9C029 511 aa5.78□□□□□ -1.48
NF1-219ENST00000579081 CCDC8Q9H0W5 538 aaPredicted RBP5.78□□□□□ -1.48
NF1-219ENST00000579081 GEN1Q17RS7 908 aa5.78□□□□□ -1.48
NF1-219ENST00000579081 SMARCC2Q8TAQ2 1214 aa5.78□□□□□ -1.48
NF1-219ENST00000579081 SIRT1Q96EB6 747 aa5.78□□□□□ -1.48
NF1-219ENST00000579081 CRNKL1Q9BZJ0 848 aaKnown RBP5.78□□□□□ -1.48
NF1-219ENST00000579081 VCX3BQ9H321 246 aa5.78□□□□□ -1.48
NF1-219ENST00000579081 EXOC6BQ9Y2D4 811 aa5.78□□□□□ -1.48
NF1-219ENST00000579081 OPA1O60313 960 aa5.78□□□□□ -1.48
NF1-219ENST00000579081 LPXNO60711 386 aa5.78□□□□□ -1.48
NF1-219ENST00000579081 ADAMTS2O95450 1211 aa5.78□□□□□ -1.48
NF1-219ENST00000579081 RSPH3Q86UC2 560 aa5.78□□□□□ -1.48
NF1-219ENST00000579081 EIF2S1P05198 315 aaKnown RBP5.77□□□□□ -1.49
NF1-219ENST00000579081 CCDC102BQ68D86 513 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 RAB3IPQ96QF0 476 aaPredicted RBP5.77□□□□□ -1.49
NF1-219ENST00000579081 PRDM10Q9NQV6 1147 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 STIM2Q9P246 746 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 GNG11P61952 73 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 MAP3K21Q5TCX8 1036 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 CERS3Q8IU89 383 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 PPFIBP2Q8ND30 876 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 TOP2BQ02880 1626 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 RASA3Q14644 834 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 NCAPGQ9BPX3 1015 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 SLC26A6Q9BXS9 759 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 RTEL1-TNFRSF6BF6WH68 1400 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 VPS52Q8N1B4 723 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 NGLY1Q96IV0 654 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 IFT74Q96LB3 600 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 ZSWIM4Q9H7M6 989 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 NOC2LQ9Y3T9 749 aaKnown RBP5.77□□□□□ -1.49
NF1-219ENST00000579081 TACC1O75410 805 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 CIB2O75838 187 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 MPRIPQ6WCQ1 1025 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 MFSD6Q6ZSS7 791 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 RNF34Q969K3 372 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 THOC1Q96FV9 657 aaKnown RBP5.77□□□□□ -1.49
NF1-219ENST00000579081 CTAGE15A4D2H0 777 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 CTAGE8P0CG41 777 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 ATP2B3Q16720 1220 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 CTAGE6Q86UF2 777 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 CTAGE4Q8IX94 777 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 YY1AP1Q9H869 796 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 ORC3Q9UBD5 711 aaPredicted RBP5.77□□□□□ -1.49
NF1-219ENST00000579081 NPC1L1Q9UHC9 1359 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 EXOC5O00471 708 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 CASQ2O14958 399 aaPredicted RBP5.77□□□□□ -1.49
NF1-219ENST00000579081 ZRANB2O95218 330 aaKnown RBP eCLIP5.77□□□□□ -1.49
NF1-219ENST00000579081 SLC8A1P32418 973 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 METAP2P50579 478 aaKnown RBP eCLIP5.77□□□□□ -1.49
NF1-219ENST00000579081 SLC4A8Q2Y0W8 1093 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 PPP1R42Q7Z4L9 355 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 RSRC1Q96IZ7 334 aaKnown RBP5.77□□□□□ -1.49
NF1-219ENST00000579081 MAK16Q9BXY0 300 aaKnown RBP5.77□□□□□ -1.49
NF1-219ENST00000579081 C6orf50Q9HD87 102 aa5.77□□□□□ -1.49
NF1-219ENST00000579081 RFC4P35249 363 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 RFC1P35251 1148 aaPredicted RBP5.76□□□□□ -1.49
NF1-219ENST00000579081 PLS1Q14651 629 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 ECM2O94769 699 aaPredicted RBP5.76□□□□□ -1.49
NF1-219ENST00000579081 ZFYP08048 801 aaPredicted RBP5.76□□□□□ -1.49
NF1-219ENST00000579081 GPTP24298 496 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 SETDB1Q15047 1291 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 HSP90AA5PQ58FG0 334 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 CCDC121Q6ZUS5 278 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 AFG3L2Q9Y4W6 797 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 EVI5O60447 810 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 DUSP27Q5VZP5 1158 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 FAM204AQ9H8W3 233 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 RBM27Q9P2N5 1060 aaKnown RBP5.76□□□□□ -1.49
NF1-219ENST00000579081 NOD1Q9Y239 953 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 TSPY3P0CV98 308 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 TSPY8P0CW00 308 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 MAP7Q14244 749 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 ERCC6LQ2NKX8 1250 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 GBP6Q6ZN66 633 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 EPSTI1Q96J88 318 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 KCNK9Q9NPC2 374 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 ATP6V0A2Q9Y487 856 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 NESP48681 1621 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 WDR46O15213 610 aaKnown RBP5.76□□□□□ -1.49
NF1-219ENST00000579081 STAT6P42226 847 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 SPAG1Q07617 926 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 PPP2R5AQ15172 486 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 CTAGE1Q96RT6 745 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 RNF216Q9NWF9 866 aaPredicted RBP5.76□□□□□ -1.49
NF1-219ENST00000579081 UQCRFS1P1P0C7P4 283 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 SKILP12757 684 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 SEPT2Q15019 361 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 RRS1Q15050 365 aaKnown RBP5.76□□□□□ -1.49
NF1-219ENST00000579081 NBPF9Q3BBW0 867 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 PPP1R21Q6ZMI0 780 aa5.76□□□□□ -1.49
NF1-219ENST00000579081 GABPB2Q8TAK5 448 aaPredicted RBP5.76□□□□□ -1.49
NF1-219ENST00000579081 FAM135AQ9P2D6 1515 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 432.1 ms