RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 CHRNDQ07001 517 aa17.15■□□□□ 0.34
CSNK1D-208ENST00000578501 DOK7Q18PE1 504 aa17.15■□□□□ 0.34
CSNK1D-208ENST00000578501 G3V3G9 751 aa17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 PSMD14O00487 310 aa17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 BCAR3O75815 825 aa17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 EPS15P42566 896 aa17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 GMPSP49915 693 aaPredicted RBP17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 TAF7LQ5H9L4 462 aa17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 DCAF8Q5TAQ9 597 aa17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 CST9Q5W186 159 aa17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 INTS3Q68E01 1043 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 LDHAL6AQ6ZMR3 332 aa17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 PODNQ7Z5L7 613 aa17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 ANKRD44Q8N8A2 993 aa17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 DPF2Q92785 391 aa17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 MCOLN1Q9GZU1 580 aa17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 HDAC5Q9UQL6 1122 aa17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 ZNF804BA4D1E1 1349 aa17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 SPEF2Q9C093 1822 aa17.14■□□□□ 0.33
CSNK1D-208ENST00000578501 WTIPA6NIX2 430 aaPredicted RBP17.13■□□□□ 0.33
CSNK1D-208ENST00000578501 VIL1P09327 827 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-208ENST00000578501 RPS12P25398 132 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-208ENST00000578501 ATF7IPQ6VMQ6 1270 aa17.13■□□□□ 0.33
CSNK1D-208ENST00000578501 ADARB2Q9NS39 739 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-208ENST00000578501 TRIM27P14373 513 aa17.12■□□□□ 0.33
CSNK1D-208ENST00000578501 C15orf52Q6ZUT6 534 aaKnown RBP17.12■□□□□ 0.33
CSNK1D-208ENST00000578501 ZNF594Q96JF6 807 aaPredicted RBP17.12■□□□□ 0.33
CSNK1D-208ENST00000578501 HHIPL1Q96JK4 782 aa17.12■□□□□ 0.33
CSNK1D-208ENST00000578501 COA1Q9GZY4 146 aa17.12■□□□□ 0.33
CSNK1D-208ENST00000578501 KCNQ5Q9NR82 932 aa17.12■□□□□ 0.33
CSNK1D-208ENST00000578501 CNNM1Q9NRU3 951 aa17.12■□□□□ 0.33
CSNK1D-208ENST00000578501 UBTFL1P0CB47 393 aaPredicted RBP17.11■□□□□ 0.33
CSNK1D-208ENST00000578501 KCNJ4P48050 445 aa17.11■□□□□ 0.33
CSNK1D-208ENST00000578501 CNOT7Q9UIV1 285 aaKnown RBP17.11■□□□□ 0.33
CSNK1D-208ENST00000578501 TSKSQ9UJT2 592 aa17.11■□□□□ 0.33
CSNK1D-208ENST00000578501 RIPOR2Q9Y4F9 1068 aa17.11■□□□□ 0.33
CSNK1D-208ENST00000578501 ZNF609O15014 1411 aa17.11■□□□□ 0.33
CSNK1D-208ENST00000578501 AOC2O75106 756 aa17.1■□□□□ 0.33
CSNK1D-208ENST00000578501 FMR1Q06787 632 aaKnown RBP eCLIP17.1■□□□□ 0.33
CSNK1D-208ENST00000578501 SAPCD2Q86UD0 394 aa17.1■□□□□ 0.33
CSNK1D-208ENST00000578501 FRAT1Q92837 279 aaPredicted RBP17.1■□□□□ 0.33
CSNK1D-208ENST00000578501 ZBTB12Q9Y330 459 aaPredicted RBP17.1■□□□□ 0.33
CSNK1D-208ENST00000578501 USP17L3A6NCW0 530 aa17.09■□□□□ 0.33
CSNK1D-208ENST00000578501 USP17L4A6NCW7 530 aa17.09■□□□□ 0.33
CSNK1D-208ENST00000578501 H7C1D1 291 aa17.09■□□□□ 0.33
CSNK1D-208ENST00000578501 TRAF5O00463 557 aa17.09■□□□□ 0.33
CSNK1D-208ENST00000578501 TAF5LO75529 589 aa17.09■□□□□ 0.33
CSNK1D-208ENST00000578501 DGKZQ13574 1117 aa17.09■□□□□ 0.33
CSNK1D-208ENST00000578501 ZKSCAN2Q63HK3 967 aa17.09■□□□□ 0.33
CSNK1D-208ENST00000578501 USP17L1Q7RTZ2 530 aa17.09■□□□□ 0.33
CSNK1D-208ENST00000578501 TXNRD3Q86VQ6 643 aa17.09■□□□□ 0.33
CSNK1D-208ENST00000578501 MICALL2Q8IY33 904 aa17.09■□□□□ 0.33
CSNK1D-208ENST00000578501 AGBL3Q8NEM8 1001 aa17.09■□□□□ 0.33
CSNK1D-208ENST00000578501 HELBQ8NG08 1087 aaPredicted RBP17.09■□□□□ 0.33
CSNK1D-208ENST00000578501 MROH5Q6ZUA9 1318 aa17.09■□□□□ 0.33
CSNK1D-208ENST00000578501 IRS2Q9Y4H2 1338 aa17.09■□□□□ 0.33
CSNK1D-208ENST00000578501 SCN9AQ15858 1988 aa17.08■□□□□ 0.33
CSNK1D-208ENST00000578501 CELF2O95319 508 aaKnown RBP17.08■□□□□ 0.32
CSNK1D-208ENST00000578501 GNAI3P08754 354 aa17.08■□□□□ 0.32
CSNK1D-208ENST00000578501 UBE4AQ14139 1066 aa17.08■□□□□ 0.32
CSNK1D-208ENST00000578501 RSBN1LQ6PCB5 846 aaPredicted RBP17.08■□□□□ 0.32
CSNK1D-208ENST00000578501 ZC3H15Q8WU90 426 aaKnown RBP17.08■□□□□ 0.32
CSNK1D-208ENST00000578501 PGAP2Q9UHJ9 254 aa17.08■□□□□ 0.32
CSNK1D-208ENST00000578501 KLRK1P26718 216 aa17.07■□□□□ 0.32
CSNK1D-208ENST00000578501 RFX5P48382 616 aaPredicted RBP17.07■□□□□ 0.32
CSNK1D-208ENST00000578501 STRIP1Q5VSL9 837 aa17.07■□□□□ 0.32
CSNK1D-208ENST00000578501 GMLQ99445 158 aa17.07■□□□□ 0.32
CSNK1D-208ENST00000578501 MEIS3Q99687 375 aa17.07■□□□□ 0.32
CSNK1D-208ENST00000578501 PUS3Q9BZE2 481 aaKnown RBP17.07■□□□□ 0.32
CSNK1D-208ENST00000578501 TRPM7Q96QT4 1865 aa17.07■□□□□ 0.32
CSNK1D-208ENST00000578501 CD209Q9NNX6 404 aa17.06■□□□□ 0.32
CSNK1D-208ENST00000578501 FBXO3Q9UK99 471 aa17.06■□□□□ 0.32
CSNK1D-208ENST00000578501 LRRFIP2Q9Y608 721 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-208ENST00000578501 PSME4Q14997 1843 aa17.05■□□□□ 0.32
CSNK1D-208ENST00000578501 A0A1B0GUL6 1792 aa17.05■□□□□ 0.32
CSNK1D-208ENST00000578501 SHTN1A0MZ66 631 aa17.05■□□□□ 0.32
CSNK1D-208ENST00000578501 SNAP23O00161 211 aa17.05■□□□□ 0.32
CSNK1D-208ENST00000578501 PLIN1O60240 522 aa17.05■□□□□ 0.32
CSNK1D-208ENST00000578501 MMP14P50281 582 aa17.05■□□□□ 0.32
CSNK1D-208ENST00000578501 HIRAP54198 1017 aaPredicted RBP17.05■□□□□ 0.32
CSNK1D-208ENST00000578501 ZNF280AP59817 542 aaPredicted RBP17.05■□□□□ 0.32
CSNK1D-208ENST00000578501 PTPN12Q05209 780 aaKnown RBP17.05■□□□□ 0.32
CSNK1D-208ENST00000578501 NOGQ13253 232 aa17.05■□□□□ 0.32
CSNK1D-208ENST00000578501 LRRC24Q50LG9 513 aa17.05■□□□□ 0.32
CSNK1D-208ENST00000578501 DACT2Q5SW24 774 aa17.05■□□□□ 0.32
CSNK1D-208ENST00000578501 MYO3BQ8WXR4 1341 aa17.04■□□□□ 0.32
CSNK1D-208ENST00000578501 IL1R1P14778 569 aa17.04■□□□□ 0.32
CSNK1D-208ENST00000578501 METTL24Q5JXM2 366 aa17.04■□□□□ 0.32
CSNK1D-208ENST00000578501 TTLL5Q6EMB2 1281 aa17.04■□□□□ 0.32
CSNK1D-208ENST00000578501 ZNF804AQ7Z570 1209 aa17.04■□□□□ 0.32
CSNK1D-208ENST00000578501 VGLL2Q8N8G2 317 aa17.04■□□□□ 0.32
CSNK1D-208ENST00000578501 KLHDC4Q8TBB5 520 aa17.04■□□□□ 0.32
CSNK1D-208ENST00000578501 TRPM4Q8TD43 1214 aa17.04■□□□□ 0.32
CSNK1D-208ENST00000578501 CLUAP1Q96AJ1 413 aa17.04■□□□□ 0.32
CSNK1D-208ENST00000578501 TNNQ9UQP3 1299 aa17.04■□□□□ 0.32
CSNK1D-208ENST00000578501 EYA2O00167 538 aa17.03■□□□□ 0.32
CSNK1D-208ENST00000578501 PDE8BO95263 885 aa17.03■□□□□ 0.32
CSNK1D-208ENST00000578501 USP17L8P0C7I0 530 aa17.03■□□□□ 0.32
CSNK1D-208ENST00000578501 MTX1Q13505 466 aa17.03■□□□□ 0.32
CSNK1D-208ENST00000578501 SAMD7Q7Z3H4 446 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms