RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 EIF4A1P60842 406 aaKnown RBP13.83□□□□□ -0.2
ERBB2-206ENST00000578373 B4E1Z4 1266 aa13.83□□□□□ -0.2
ERBB2-206ENST00000578373 SLU7O95391 586 aaKnown RBP13.83□□□□□ -0.2
ERBB2-206ENST00000578373 MTIF2P46199 727 aaKnown RBP13.83□□□□□ -0.2
ERBB2-206ENST00000578373 KRT222Q8N1A0 295 aa13.83□□□□□ -0.2
ERBB2-206ENST00000578373 RTN1Q16799 776 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 PROSER3Q2NL68 480 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 CACNA2D4Q7Z3S7 1137 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 TTC6Q86TZ1 520 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 TAX1BP1Q86VP1 789 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 CCDC150Q8NCX0 1101 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 BMP2KQ9NSY1 1161 aaPredicted RBP13.82□□□□□ -0.2
ERBB2-206ENST00000578373 EDC4Q6P2E9 1401 aaKnown RBP13.82□□□□□ -0.2
ERBB2-206ENST00000578373 ZMYM3Q14202 1370 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 SPA17Q15506 151 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 GPIHBP1Q8IV16 184 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 CCDC148Q8NFR7 591 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 SSH3Q8TE77 659 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 RNF41Q9H4P4 317 aaPredicted RBP13.82□□□□□ -0.2
ERBB2-206ENST00000578373 PUF60Q9UHX1 559 aaKnown RBP13.82□□□□□ -0.2
ERBB2-206ENST00000578373 BMS1Q14692 1282 aaKnown RBP13.82□□□□□ -0.2
ERBB2-206ENST00000578373 RRAGBQ5VZM2 374 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 ZNF444Q8N0Y2 327 aaPredicted RBP13.82□□□□□ -0.2
ERBB2-206ENST00000578373 PHKBQ93100 1093 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 CCDC94Q9BW85 323 aaPredicted RBP13.82□□□□□ -0.2
ERBB2-206ENST00000578373 ERBB4Q15303 1308 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 PRAMEF22A3QJZ6 481 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 NR1I2O75469 434 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 MTMR6Q9Y217 621 aa13.82□□□□□ -0.2
ERBB2-206ENST00000578373 hCG_1642624A0A1W2PR95 340 aa13.81□□□□□ -0.2
ERBB2-206ENST00000578373 ATP7AQ04656 1500 aa13.81□□□□□ -0.2
ERBB2-206ENST00000578373 EXOC5O00471 708 aa13.81□□□□□ -0.2
ERBB2-206ENST00000578373 LTKP29376 864 aa13.81□□□□□ -0.2
ERBB2-206ENST00000578373 PPP1R9BQ96SB3 815 aa13.81□□□□□ -0.2
ERBB2-206ENST00000578373 MAPK8IP1Q9UQF2 711 aa13.81□□□□□ -0.2
ERBB2-206ENST00000578373 PRDM1O75626 825 aa13.8□□□□□ -0.2
ERBB2-206ENST00000578373 CDR1P51861 262 aa13.8□□□□□ -0.2
ERBB2-206ENST00000578373 JADE2Q9NQC1 790 aa13.8□□□□□ -0.2
ERBB2-206ENST00000578373 MYO1BO43795 1136 aa13.8□□□□□ -0.2
ERBB2-206ENST00000578373 FAM160A1Q05DH4 1040 aa13.8□□□□□ -0.2
ERBB2-206ENST00000578373 TTF1Q15361 905 aaPredicted RBP13.8□□□□□ -0.2
ERBB2-206ENST00000578373 SPTY2D1Q68D10 685 aaPredicted RBP13.8□□□□□ -0.2
ERBB2-206ENST00000578373 MAGEB6Q8N7X4 407 aa13.8□□□□□ -0.2
ERBB2-206ENST00000578373 TLR7Q9NYK1 1049 aaKnown RBP13.8□□□□□ -0.2
ERBB2-206ENST00000578373 YEATS4O95619 227 aa13.8□□□□□ -0.2
ERBB2-206ENST00000578373 ZNF219Q9P2Y4 722 aaPredicted RBP13.8□□□□□ -0.2
ERBB2-206ENST00000578373 ZFYP08048 801 aaPredicted RBP13.8□□□□□ -0.2
ERBB2-206ENST00000578373 ZNF75DP51815 510 aa13.8□□□□□ -0.2
ERBB2-206ENST00000578373 GCKRQ14397 625 aa13.8□□□□□ -0.2
ERBB2-206ENST00000578373 STAMQ92783 540 aa13.8□□□□□ -0.2
ERBB2-206ENST00000578373 ABCC2Q92887 1545 aa13.79□□□□□ -0.2
ERBB2-206ENST00000578373 GOLGA6L10A6NI86 522 aa13.79□□□□□ -0.2
ERBB2-206ENST00000578373 TRIM47Q96LD4 638 aa13.79□□□□□ -0.2
ERBB2-206ENST00000578373 NRBP1Q9UHY1 535 aa13.79□□□□□ -0.2
ERBB2-206ENST00000578373 PTPN21Q16825 1174 aa13.79□□□□□ -0.2
ERBB2-206ENST00000578373 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.79□□□□□ -0.2
ERBB2-206ENST00000578373 CLSTN2Q9H4D0 955 aa13.79□□□□□ -0.2
ERBB2-206ENST00000578373 SEC63Q9UGP8 760 aaKnown RBP13.79□□□□□ -0.2
ERBB2-206ENST00000578373 LARGE1O95461 756 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 TRIM21P19474 475 aaKnown RBP13.78□□□□□ -0.2
ERBB2-206ENST00000578373 ZNF76P36508 570 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 ELF2Q15723 593 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 FKBP15Q5T1M5 1219 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 ZNF397Q8NF99 534 aaPredicted RBP13.78□□□□□ -0.2
ERBB2-206ENST00000578373 MYRIPQ8NFW9 859 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 METTL22Q9BUU2 404 aaPredicted RBP13.78□□□□□ -0.2
ERBB2-206ENST00000578373 FAM107BQ9H098 131 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 SBNO1A3KN83 1393 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 KIAA0754O94854 1291 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 RHOXF2BP0C7M4 288 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 SYCP1Q15431 976 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 RHOXF2Q9BQY4 288 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 FTOQ9C0B1 505 aaKnown RBP eCLIP13.78□□□□□ -0.22e-6■□□□□ 10.4
ERBB2-206ENST00000578373 ARFGAP3Q9NP61 516 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 CABP5Q9NP86 173 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 LUC7LQ9NQ29 371 aaKnown RBP13.78□□□□□ -0.2
ERBB2-206ENST00000578373 PYCARDQ9ULZ3 195 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 EYA2O00167 538 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 IFIT1BQ5T764 474 aaKnown RBP13.78□□□□□ -0.2
ERBB2-206ENST00000578373 USP28Q96RU2 1077 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 BCL2L12Q9HB09 334 aa13.78□□□□□ -0.2
ERBB2-206ENST00000578373 IRS4O14654 1257 aaPredicted RBP13.77□□□□□ -0.2
ERBB2-206ENST00000578373 CCDC96Q2M329 555 aa13.77□□□□□ -0.2
ERBB2-206ENST00000578373 CCDC178Q5BJE1 867 aa13.77□□□□□ -0.2
ERBB2-206ENST00000578373 PODXL2Q9NZ53 605 aa13.77□□□□□ -0.2
ERBB2-206ENST00000578373 MBD4O95243 580 aa13.77□□□□□ -0.21
ERBB2-206ENST00000578373 ERCC3P19447 782 aa13.77□□□□□ -0.21
ERBB2-206ENST00000578373 TCERG1LQ5VWI1 586 aa13.77□□□□□ -0.21
ERBB2-206ENST00000578373 TRIM75PA6NK02 468 aa13.77□□□□□ -0.21
ERBB2-206ENST00000578373 CCT6AP40227 531 aaKnown RBP13.77□□□□□ -0.21
ERBB2-206ENST00000578373 PPARDQ03181 441 aa13.77□□□□□ -0.21
ERBB2-206ENST00000578373 CMTR1Q8N1G2 835 aaKnown RBP13.77□□□□□ -0.21
ERBB2-206ENST00000578373 KBTBD3Q8NAB2 608 aa13.77□□□□□ -0.21
ERBB2-206ENST00000578373 TAF4BQ92750 862 aa13.77□□□□□ -0.21
ERBB2-206ENST00000578373 CAPZA3Q96KX2 299 aa13.77□□□□□ -0.21
ERBB2-206ENST00000578373 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.77□□□□□ -0.21
ERBB2-206ENST00000578373 ERCC6L2Q5T890 1561 aa13.77□□□□□ -0.21
ERBB2-206ENST00000578373 ZPR1O75312 459 aa13.76□□□□□ -0.21
ERBB2-206ENST00000578373 GIGYF1O75420 1035 aaPredicted RBP13.76□□□□□ -0.21
ERBB2-206ENST00000578373 BEND3Q5T5X7 828 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 256 ms