RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	CSRNP1	Q96S65	589 aa		5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	BCL2L13	Q9BXK5	485 aa		5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	ZNF408	Q9H9D4	720 aa		5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	GGA1	Q9UJY5	639 aa		5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	FZD1	Q9UP38	647 aa		5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	MED23	Q9ULK4	1368 aa		5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	CACNA1F	O60840	1977 aa		5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329		H7C1D1	291 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	WNT10B	O00744	389 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	TAF5L	O75529	589 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	SLC10A3	P09131	477 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	ITGA6	P23229	1130 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	RGS19	P49795	217 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	BRPF1	P55201	1214 aa	Predicted RBP	5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	HUNK	P57058	714 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	KIF23	Q02241	960 aa	Predicted RBP	5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	MAP2K1	Q02750	393 aa	Predicted RBP	5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	GRM1	Q13255	1194 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	RASAL3	Q86YV0	1011 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	ANKRD18A	Q8IVF6	992 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	WDR63	Q8IWG1	891 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	AGBL3	Q8NEM8	1001 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	HELB	Q8NG08	1087 aa	Predicted RBP	5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	LINS1	Q8NG48	757 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	DNAAF4	Q8WXU2	420 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	ZNF594	Q96JF6	807 aa	Predicted RBP	5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	PUS3	Q9BZE2	481 aa	Known RBP	5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	GBA2	Q9HCG7	927 aa	Predicted RBP	5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	MYOZ2	Q9NPC6	264 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	SALL2	Q9Y467	1007 aa	Predicted RBP	5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	LAMB1	P07942	1786 aa		5.74	□□□□□ -1.49
PPP4R1-209	ENST00000578329	USP17L3	A6NCW0	530 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	USP17L4	A6NCW7	530 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	SASH1	O94885	1247 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	NBPF7	P0C2Y1	421 aa	Predicted RBP	5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	USP17L8	P0C7I0	530 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	ATP2B4	P23634	1241 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	CHRND	Q07001	517 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	RGMB	Q6NW40	437 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	C15orf52	Q6ZUT6	534 aa	Known RBP	5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	USP17L1	Q7RTZ2	530 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	PODN	Q7Z5L7	613 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	ANKRD44	Q8N8A2	993 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	EYA3	Q99504	573 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	ZC3H12C	Q9C0D7	883 aa	Known RBP	5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	MCOLN1	Q9GZU1	580 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	MRS2	Q9HD23	443 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	RNF186	Q9NXI6	227 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	ANKIB1	Q9P2G1	1089 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	ZNF804B	A4D1E1	1349 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	UTY	O14607	1347 aa		5.73	□□□□□ -1.49
PPP4R1-209	ENST00000578329	ZNF316	A6NFI3	1004 aa	Predicted RBP	5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	UBE2Q2L	H0YL09	131 aa		5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	IL1R1	P14778	569 aa		5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	GJA5	P36382	358 aa		5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	ECE1	P42892	770 aa		5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	CALD1	Q05682	793 aa	Known RBP	5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	LDLRAD1	Q5T700	205 aa		5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	STRIP1	Q5VSL9	837 aa		5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	TRMT2A	Q8IZ69	625 aa	Known RBP	5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	MRPL50	Q8N5N7	158 aa	Known RBP	5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	VGLL2	Q8N8G2	317 aa		5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	CDCA7L	Q96GN5	454 aa		5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	SUCLG2	Q96I99	432 aa		5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	CD209	Q9NNX6	404 aa		5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	OTOF	Q9HC10	1997 aa		5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	PITPNM2	Q9BZ72	1349 aa		5.72	□□□□□ -1.49
PPP4R1-209	ENST00000578329	COL1A1	P02452	1464 aa	Predicted RBP	5.71	□□□□□ -1.49
PPP4R1-209	ENST00000578329	DDX58	O95786	925 aa	Known RBP	5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	RFX5	P48382	616 aa	Predicted RBP	5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	GTF2I	P78347	998 aa		5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	PTPN12	Q05209	780 aa	Known RBP	5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	NOG	Q13253	232 aa		5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	FKBP5	Q13451	457 aa	Predicted RBP	5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	RABL6	Q3YEC7	729 aa	Predicted RBP	5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	LMBR1L	Q6UX01	489 aa		5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	KIAA0825	Q8IV33	1275 aa		5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	KLHDC4	Q8TBB5	520 aa		5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	AIDA	Q96BJ3	306 aa		5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	DCPS	Q96C86	337 aa	Known RBP	5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	CLMN	Q96JQ2	1002 aa		5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	PRMT6	Q96LA8	375 aa	Predicted RBP	5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	TEPSIN	Q96N21	525 aa		5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	CDC5L	Q99459	802 aa	Known RBP	5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	COA1	Q9GZY4	146 aa		5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	JAG2	Q9Y219	1238 aa		5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	LEMD3	Q9Y2U8	911 aa		5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	RIPOR2	Q9Y4F9	1068 aa		5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	ECM29	Q5VYK3	1845 aa		5.71	□□□□□ -1.5
PPP4R1-209	ENST00000578329	GRM8	O00222	908 aa		5.7	□□□□□ -1.5
PPP4R1-209	ENST00000578329	TRPA1	O75762	1119 aa		5.7	□□□□□ -1.5
PPP4R1-209	ENST00000578329	ZNF157	P51786	506 aa	Predicted RBP	5.7	□□□□□ -1.5
PPP4R1-209	ENST00000578329	LRRC24	Q50LG9	513 aa		5.7	□□□□□ -1.5
PPP4R1-209	ENST00000578329	TTLL5	Q6EMB2	1281 aa		5.7	□□□□□ -1.5
PPP4R1-209	ENST00000578329	MTMR14	Q8NCE2	650 aa		5.7	□□□□□ -1.5
PPP4R1-209	ENST00000578329	TDRD7	Q8NHU6	1098 aa	Known RBP	5.7	□□□□□ -1.5
PPP4R1-209	ENST00000578329	SSH1	Q8WYL5	1049 aa		5.7	□□□□□ -1.5
PPP4R1-209	ENST00000578329	FAM84B	Q96KN1	310 aa	Predicted RBP	5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms