RNA–Protein interactions for RNA: ENST00000578318.1

ITGB4-204, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-204ENST00000578318 FKBP5Q13451 457 aaPredicted RBP18.49■□□□□ 0.55
ITGB4-204ENST00000578318 GCKRQ14397 625 aa18.49■□□□□ 0.55
ITGB4-204ENST00000578318 ANGEL2Q5VTE6 544 aaKnown RBP18.49■□□□□ 0.55
ITGB4-204ENST00000578318 DNAAF4Q8WXU2 420 aa18.49■□□□□ 0.55
ITGB4-204ENST00000578318 CCDC102AQ96A19 550 aa18.49■□□□□ 0.55
ITGB4-204ENST00000578318 CDCA5Q96FF9 252 aa18.49■□□□□ 0.55
ITGB4-204ENST00000578318 ZIC5Q96T25 663 aa18.49■□□□□ 0.55
ITGB4-204ENST00000578318 MYH16Q9H6N6 1097 aa18.49■□□□□ 0.55
ITGB4-204ENST00000578318 MYOZ2Q9NPC6 264 aa18.49■□□□□ 0.55
ITGB4-204ENST00000578318 LEMD3Q9Y2U8 911 aa18.48■□□□□ 0.55
ITGB4-204ENST00000578318 PITPNM2Q9BZ72 1349 aa18.48■□□□□ 0.55
ITGB4-204ENST00000578318 WTIPA6NIX2 430 aaPredicted RBP18.47■□□□□ 0.55
ITGB4-204ENST00000578318 ITGA6P23229 1130 aa18.47■□□□□ 0.55
ITGB4-204ENST00000578318 ZNF157P51786 506 aaPredicted RBP18.47■□□□□ 0.55
ITGB4-204ENST00000578318 CASP7P55210 303 aa18.47■□□□□ 0.55
ITGB4-204ENST00000578318 WDR63Q8IWG1 891 aa18.47■□□□□ 0.55
ITGB4-204ENST00000578318 LINS1Q8NG48 757 aa18.47■□□□□ 0.55
ITGB4-204ENST00000578318 COA1Q9GZY4 146 aa18.47■□□□□ 0.55
ITGB4-204ENST00000578318 AKAP11Q9UKA4 1901 aa18.47■□□□□ 0.55
ITGB4-204ENST00000578318 MYO3BQ8WXR4 1341 aa18.47■□□□□ 0.55
ITGB4-204ENST00000578318 PAPPA2Q9BXP8 1791 aa18.46■□□□□ 0.55
ITGB4-204ENST00000578318 ANP32CO43423 234 aa18.46■□□□□ 0.55
ITGB4-204ENST00000578318 FAM161AQ3B820 660 aa18.46■□□□□ 0.55
ITGB4-204ENST00000578318 MPHOSPH8Q99549 860 aa18.46■□□□□ 0.55
ITGB4-204ENST00000578318 ANKRD2Q9GZV1 360 aa18.46■□□□□ 0.55
ITGB4-204ENST00000578318 VAMP4O75379 141 aa18.45■□□□□ 0.54
ITGB4-204ENST00000578318 CSF1RP07333 972 aa18.45■□□□□ 0.54
ITGB4-204ENST00000578318 SLC10A3P09131 477 aa18.45■□□□□ 0.54
ITGB4-204ENST00000578318 FKBP1BP68106 108 aa18.45■□□□□ 0.54
ITGB4-204ENST00000578318 KIF23Q02241 960 aaPredicted RBP18.45■□□□□ 0.54
ITGB4-204ENST00000578318 DACT2Q5SW24 774 aa18.45■□□□□ 0.54
ITGB4-204ENST00000578318 STRIP1Q5VSL9 837 aa18.45■□□□□ 0.54
ITGB4-204ENST00000578318 ZNF804BA4D1E1 1349 aa18.45■□□□□ 0.54
ITGB4-204ENST00000578318 EXOSC9Q06265 439 aaKnown RBP18.44■□□□□ 0.54
ITGB4-204ENST00000578318 OGFOD1Q8N543 542 aa18.44■□□□□ 0.54
ITGB4-204ENST00000578318 FBXW7Q969H0 707 aa18.44■□□□□ 0.54
ITGB4-204ENST00000578318 SAGE1Q9NXZ1 904 aa18.44■□□□□ 0.54
ITGB4-204ENST00000578318 SALL2Q9Y467 1007 aaPredicted RBP18.44■□□□□ 0.54
ITGB4-204ENST00000578318 CCDC85CA6NKD9 419 aa18.43■□□□□ 0.54
ITGB4-204ENST00000578318 MMP14P50281 582 aa18.43■□□□□ 0.54
ITGB4-204ENST00000578318 TXNRD3Q86VQ6 643 aa18.43■□□□□ 0.54
ITGB4-204ENST00000578318 MXD3Q9BW11 206 aa18.43■□□□□ 0.54
ITGB4-204ENST00000578318 ANKRD18BA2A2Z9 1011 aa18.42■□□□□ 0.54
ITGB4-204ENST00000578318 KCNJ4P48050 445 aa18.42■□□□□ 0.54
ITGB4-204ENST00000578318 NBPF9Q3BBW0 867 aa18.42■□□□□ 0.54
ITGB4-204ENST00000578318 MCOLN1Q9GZU1 580 aa18.42■□□□□ 0.54
ITGB4-204ENST00000578318 A0A1B0GUL6 1792 aa18.42■□□□□ 0.54
ITGB4-204ENST00000578318 KLRK1P26718 216 aa18.41■□□□□ 0.54
ITGB4-204ENST00000578318 CHRNDQ07001 517 aa18.41■□□□□ 0.54
ITGB4-204ENST00000578318 TTLL5Q6EMB2 1281 aa18.41■□□□□ 0.54
ITGB4-204ENST00000578318 RASAL3Q86YV0 1011 aa18.41■□□□□ 0.54
ITGB4-204ENST00000578318 REM2Q8IYK8 340 aaPredicted RBP18.41■□□□□ 0.54
ITGB4-204ENST00000578318 WNT10BO00744 389 aa18.4■□□□□ 0.54
ITGB4-204ENST00000578318 DGKZQ13574 1117 aa18.4■□□□□ 0.54
ITGB4-204ENST00000578318 RNF186Q9NXI6 227 aa18.4■□□□□ 0.54
ITGB4-204ENST00000578318 HDAC9Q9UKV0 1011 aa18.4■□□□□ 0.54
ITGB4-204ENST00000578318 ZNF316A6NFI3 1004 aaPredicted RBP18.39■□□□□ 0.53
ITGB4-204ENST00000578318 F6X3S4 739 aa18.39■□□□□ 0.53
ITGB4-204ENST00000578318 IFIT5Q13325 482 aaKnown RBP18.39■□□□□ 0.53
ITGB4-204ENST00000578318 BEND3Q5T5X7 828 aa18.39■□□□□ 0.53
ITGB4-204ENST00000578318 CSRNP1Q96S65 589 aa18.39■□□□□ 0.53
ITGB4-204ENST00000578318 SCAF8Q9UPN6 1271 aaKnown RBP18.39■□□□□ 0.53
ITGB4-204ENST00000578318 SASH1O94885 1247 aa18.38■□□□□ 0.53
ITGB4-204ENST00000578318 GTF2IP78347 998 aa18.38■□□□□ 0.53
ITGB4-204ENST00000578318 FOXO4P98177 505 aa18.38■□□□□ 0.53
ITGB4-204ENST00000578318 KIAA0825Q8IV33 1275 aa18.38■□□□□ 0.53
ITGB4-204ENST00000578318 CD209Q9NNX6 404 aa18.38■□□□□ 0.53
ITGB4-204ENST00000578318 CHMP3Q9Y3E7 222 aa18.38■□□□□ 0.53
ITGB4-204ENST00000578318 TRPA1O75762 1119 aa18.37■□□□□ 0.53
ITGB4-204ENST00000578318 NF2P35240 595 aa18.37■□□□□ 0.53
ITGB4-204ENST00000578318 C15orf52Q6ZUT6 534 aaKnown RBP18.37■□□□□ 0.53
ITGB4-204ENST00000578318 SPINK5Q9NQ38 1064 aaPredicted RBP18.37■□□□□ 0.53
ITGB4-204ENST00000578318 TAF5LO75529 589 aa18.36■□□□□ 0.53
ITGB4-204ENST00000578318 TTLL12Q14166 644 aaPredicted RBP18.36■□□□□ 0.53
ITGB4-204ENST00000578318 PRAMEF18Q5VWM3 479 aa18.36■□□□□ 0.53
ITGB4-204ENST00000578318 MOB2Q70IA6 237 aa18.36■□□□□ 0.53
ITGB4-204ENST00000578318 APOBEC3FQ8IUX4 373 aaKnown RBP18.36■□□□□ 0.53
ITGB4-204ENST00000578318 IRS2Q9Y4H2 1338 aa18.36■□□□□ 0.53
ITGB4-204ENST00000578318 ECM29Q5VYK3 1845 aa18.35■□□□□ 0.53
ITGB4-204ENST00000578318 UBE2Q2LH0YL09 131 aa18.35■□□□□ 0.53
ITGB4-204ENST00000578318 GRM8O00222 908 aa18.35■□□□□ 0.53
ITGB4-204ENST00000578318 RGS19P49795 217 aa18.35■□□□□ 0.53
ITGB4-204ENST00000578318 LMBR1LQ6UX01 489 aa18.35■□□□□ 0.53
ITGB4-204ENST00000578318 ZBED3Q96IU2 234 aaPredicted RBP18.35■□□□□ 0.53
ITGB4-204ENST00000578318 CCDC57Q2TAC2 916 aa18.34■□□□□ 0.53
ITGB4-204ENST00000578318 ZNF804AQ7Z570 1209 aa18.34■□□□□ 0.53
ITGB4-204ENST00000578318 HELBQ8NG08 1087 aaPredicted RBP18.34■□□□□ 0.53
ITGB4-204ENST00000578318 COL1A1P02452 1464 aaPredicted RBP18.33■□□□□ 0.53
ITGB4-204ENST00000578318 SNAP23O00161 211 aa18.33■□□□□ 0.52
ITGB4-204ENST00000578318 ALDH1L1O75891 902 aa18.33■□□□□ 0.52
ITGB4-204ENST00000578318 IL1R1P14778 569 aa18.33■□□□□ 0.52
ITGB4-204ENST00000578318 MLLT1Q03111 559 aaPredicted RBP18.33■□□□□ 0.52
ITGB4-204ENST00000578318 TAF7LQ5H9L4 462 aa18.33■□□□□ 0.52
ITGB4-204ENST00000578318 EPHA10Q5JZY3 1008 aa18.33■□□□□ 0.52
ITGB4-204ENST00000578318 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.52
ITGB4-204ENST00000578318 C9orf78Q9NZ63 289 aaPredicted RBP18.33■□□□□ 0.52
ITGB4-204ENST00000578318 DLGAP5Q15398 846 aa18.32■□□□□ 0.52
ITGB4-204ENST00000578318 LDHAL6AQ6ZMR3 332 aa18.32■□□□□ 0.52
ITGB4-204ENST00000578318 ARMC9Q7Z3E5 817 aa18.32■□□□□ 0.52
ITGB4-204ENST00000578318 MTMR14Q8NCE2 650 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms