RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 AIMP1Q12904 312 aaKnown RBP17.67■□□□□ 0.42
SREBF1-217ENST00000577897 PROSER3Q2NL68 480 aa17.67■□□□□ 0.42
SREBF1-217ENST00000577897 HSP90AB3PQ58FF7 597 aa17.67■□□□□ 0.42
SREBF1-217ENST00000577897 PRAMEF18Q5VWM3 479 aa17.67■□□□□ 0.42
SREBF1-217ENST00000577897 FRAT1Q92837 279 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-217ENST00000577897 SMC4Q9NTJ3 1288 aa17.67■□□□□ 0.42
SREBF1-217ENST00000577897 TRIM17Q9Y577 477 aa17.67■□□□□ 0.42
SREBF1-217ENST00000577897 SCN9AQ15858 1988 aa17.66■□□□□ 0.42
SREBF1-217ENST00000577897 VIL1P09327 827 aaKnown RBP17.66■□□□□ 0.42
SREBF1-217ENST00000577897 TM4SF4P48230 202 aa17.66■□□□□ 0.42
SREBF1-217ENST00000577897 SREBF2Q12772 1141 aa17.66■□□□□ 0.42
SREBF1-217ENST00000577897 NOM1Q5C9Z4 860 aaKnown RBP17.66■□□□□ 0.42
SREBF1-217ENST00000577897 LRP10Q7Z4F1 713 aa17.66■□□□□ 0.42
SREBF1-217ENST00000577897 TSR2Q969E8 191 aaKnown RBP17.66■□□□□ 0.42
SREBF1-217ENST00000577897 R3HDMLQ9H3Y0 253 aa17.66■□□□□ 0.42
SREBF1-217ENST00000577897 PDIA6Q15084 440 aa17.65■□□□□ 0.42
SREBF1-217ENST00000577897 FTSJ3Q8IY81 847 aaKnown RBP17.65■□□□□ 0.42
SREBF1-217ENST00000577897 ZC3H12CQ9C0D7 883 aaKnown RBP17.65■□□□□ 0.42
SREBF1-217ENST00000577897 COLQQ9Y215 455 aaPredicted RBP17.65■□□□□ 0.42
SREBF1-217ENST00000577897 COL4A1P02462 1669 aa17.64■□□□□ 0.42
SREBF1-217ENST00000577897 ZNF853P0CG23 659 aa17.64■□□□□ 0.41
SREBF1-217ENST00000577897 ZNF280AP59817 542 aaPredicted RBP17.64■□□□□ 0.41
SREBF1-217ENST00000577897 INTS3Q68E01 1043 aaKnown RBP17.64■□□□□ 0.41
SREBF1-217ENST00000577897 COPS6Q7L5N1 327 aa17.64■□□□□ 0.41
SREBF1-217ENST00000577897 SLC17A8Q8NDX2 589 aa17.64■□□□□ 0.41
SREBF1-217ENST00000577897 TBC1D16Q8TBP0 767 aa17.64■□□□□ 0.41
SREBF1-217ENST00000577897 NECTIN2Q92692 538 aa17.64■□□□□ 0.41
SREBF1-217ENST00000577897 CHMP4AQ9BY43 222 aa17.64■□□□□ 0.41
SREBF1-217ENST00000577897 RANBP2P49792 3224 aaKnown RBP17.64■□□□□ 0.41
SREBF1-217ENST00000577897 RBBP6Q7Z6E9 1792 aaKnown RBP17.63■□□□□ 0.41
SREBF1-217ENST00000577897 TCIRG1Q13488 830 aa17.63■□□□□ 0.41
SREBF1-217ENST00000577897 RSBN1LQ6PCB5 846 aaPredicted RBP17.63■□□□□ 0.41
SREBF1-217ENST00000577897 XAGE3Q8WTP9 111 aa17.63■□□□□ 0.41
SREBF1-217ENST00000577897 MYOZ2Q9NPC6 264 aa17.63■□□□□ 0.41
SREBF1-217ENST00000577897 PITPNM2Q9BZ72 1349 aa17.63■□□□□ 0.41
SREBF1-217ENST00000577897 UFL1O94874 794 aa17.62■□□□□ 0.41
SREBF1-217ENST00000577897 PRKG1Q13976 671 aa17.62■□□□□ 0.41
SREBF1-217ENST00000577897 CENPQQ7L2Z9 268 aaPredicted RBP17.62■□□□□ 0.41
SREBF1-217ENST00000577897 AGBL3Q8NEM8 1001 aa17.62■□□□□ 0.41
SREBF1-217ENST00000577897 BABAM1Q9NWV8 329 aa17.62■□□□□ 0.41
SREBF1-217ENST00000577897 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.62■□□□□ 0.41
SREBF1-217ENST00000577897 USP17L8P0C7I0 530 aa17.61■□□□□ 0.41
SREBF1-217ENST00000577897 EN2P19622 333 aaPredicted RBP17.61■□□□□ 0.41
SREBF1-217ENST00000577897 NF2P35240 595 aa17.61■□□□□ 0.41
SREBF1-217ENST00000577897 OTOP1Q7RTM1 612 aa17.61■□□□□ 0.41
SREBF1-217ENST00000577897 TSPYL4Q9UJ04 414 aa17.61■□□□□ 0.41
SREBF1-217ENST00000577897 RTL5Q5HYW3 569 aaPredicted RBP17.6■□□□□ 0.41
SREBF1-217ENST00000577897 C20orf194Q5TEA3 1177 aa17.6■□□□□ 0.41
SREBF1-217ENST00000577897 DZIP1LQ8IYY4 767 aaKnown RBP17.6■□□□□ 0.41
SREBF1-217ENST00000577897 FAM89AQ96GI7 184 aa17.6■□□□□ 0.41
SREBF1-217ENST00000577897 CFHR5Q9BXR6 569 aa17.6■□□□□ 0.41
SREBF1-217ENST00000577897 MBIPQ9NS73 344 aa17.6■□□□□ 0.41
SREBF1-217ENST00000577897 ANKIB1Q9P2G1 1089 aa17.6■□□□□ 0.41
SREBF1-217ENST00000577897 SF3B3Q15393 1217 aaKnown RBP17.59■□□□□ 0.41
SREBF1-217ENST00000577897 ARHGAP45Q92619 1136 aa17.59■□□□□ 0.41
SREBF1-217ENST00000577897 ZNF609O15014 1411 aa17.58■□□□□ 0.41
SREBF1-217ENST00000577897 CHL1O00533 1208 aa17.58■□□□□ 0.4
SREBF1-217ENST00000577897 ALDH1A1P00352 501 aa17.58■□□□□ 0.4
SREBF1-217ENST00000577897 PTPN12Q05209 780 aaKnown RBP17.58■□□□□ 0.4
SREBF1-217ENST00000577897 TWISTNBQ3B726 338 aaPredicted RBP17.58■□□□□ 0.4
SREBF1-217ENST00000577897 NBPF9Q3BBW0 867 aa17.58■□□□□ 0.4
SREBF1-217ENST00000577897 ATF7IPQ6VMQ6 1270 aa17.58■□□□□ 0.4
SREBF1-217ENST00000577897 SSH1Q8WYL5 1049 aa17.58■□□□□ 0.4
SREBF1-217ENST00000577897 GGA1Q9UJY5 639 aa17.58■□□□□ 0.4
SREBF1-217ENST00000577897 RPS8P62241 208 aaKnown RBP17.57■□□□□ 0.4
SREBF1-217ENST00000577897 ARMC9Q7Z3E5 817 aa17.57■□□□□ 0.4
SREBF1-217ENST00000577897 CLUAP1Q96AJ1 413 aa17.57■□□□□ 0.4
SREBF1-217ENST00000577897 DDX19BQ9UMR2 479 aa17.57■□□□□ 0.4
SREBF1-217ENST00000577897 PSME4Q14997 1843 aa17.56■□□□□ 0.4
SREBF1-217ENST00000577897 VAMP4O75379 141 aa17.56■□□□□ 0.4
SREBF1-217ENST00000577897 SPRYD7Q5W111 196 aa17.56■□□□□ 0.4
SREBF1-217ENST00000577897 GMLQ99445 158 aa17.56■□□□□ 0.4
SREBF1-217ENST00000577897 PTPN22Q9Y2R2 807 aa17.56■□□□□ 0.4
SREBF1-217ENST00000577897 ATP5J2-PTCD1G3V325 749 aa17.55■□□□□ 0.4
SREBF1-217ENST00000577897 MVPQ14764 893 aaKnown RBP17.55■□□□□ 0.4
SREBF1-217ENST00000577897 CD99L2Q8TCZ2 262 aa17.55■□□□□ 0.4
SREBF1-217ENST00000577897 API5Q9BZZ5 524 aaKnown RBP17.55■□□□□ 0.4
SREBF1-217ENST00000577897 PODXL2Q9NZ53 605 aa17.55■□□□□ 0.4
SREBF1-217ENST00000577897 COG6Q9Y2V7 657 aa17.55■□□□□ 0.4
SREBF1-217ENST00000577897 USP17L3A6NCW0 530 aa17.54■□□□□ 0.4
SREBF1-217ENST00000577897 USP17L4A6NCW7 530 aa17.54■□□□□ 0.4
SREBF1-217ENST00000577897 USP17L1Q7RTZ2 530 aa17.54■□□□□ 0.4
SREBF1-217ENST00000577897 IFNL1Q8IU54 200 aa17.54■□□□□ 0.4
SREBF1-217ENST00000577897 PANK1Q8TE04 598 aa17.54■□□□□ 0.4
SREBF1-217ENST00000577897 FBXW7Q969H0 707 aa17.54■□□□□ 0.4
SREBF1-217ENST00000577897 ERO1AQ96HE7 468 aa17.54■□□□□ 0.4
SREBF1-217ENST00000577897 TMEM106CQ9BVX2 250 aa17.54■□□□□ 0.4
SREBF1-217ENST00000577897 SEC31BQ9NQW1 1179 aa17.54■□□□□ 0.4
SREBF1-217ENST00000577897 TSHZ2Q9NRE2 1034 aa17.54■□□□□ 0.4
SREBF1-217ENST00000577897 NOB1Q9ULX3 412 aaKnown RBP17.54■□□□□ 0.4
SREBF1-217ENST00000577897 ANGEL1Q9UNK9 670 aaKnown RBP17.54■□□□□ 0.4
SREBF1-217ENST00000577897 FZD1Q9UP38 647 aa17.54■□□□□ 0.4
SREBF1-217ENST00000577897 MANSC4A6NHS7 340 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-217ENST00000577897 IRS4O14654 1257 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-217ENST00000577897 SASH1O94885 1247 aa17.53■□□□□ 0.4
SREBF1-217ENST00000577897 ARMC5Q96C12 935 aa17.53■□□□□ 0.4
SREBF1-217ENST00000577897 OTUD5Q96G74 571 aa17.53■□□□□ 0.4
SREBF1-217ENST00000577897 RWDD1Q9H446 243 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-217ENST00000577897 WNT10BO00744 389 aa17.52■□□□□ 0.4
SREBF1-217ENST00000577897 MXD3Q9BW11 206 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms