RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 ANKRD45Q5TZF3 282 aa12.49□□□□□ -0.41
CRLF3-202ENST00000577725 FBXO46Q6PJ61 603 aaPredicted RBP12.49□□□□□ -0.41
CRLF3-202ENST00000577725 ZNF34Q8IZ26 560 aa12.49□□□□□ -0.41
CRLF3-202ENST00000577725 FAM89AQ96GI7 184 aa12.49□□□□□ -0.41
CRLF3-202ENST00000577725 DCTPP1Q9H773 170 aa12.49□□□□□ -0.41
CRLF3-202ENST00000577725 EXOC6BQ9Y2D4 811 aa12.49□□□□□ -0.41
CRLF3-202ENST00000577725 IBTKQ9P2D0 1353 aaPredicted RBP12.48□□□□□ -0.41
CRLF3-202ENST00000577725 PDE4AP27815 886 aa12.48□□□□□ -0.41
CRLF3-202ENST00000577725 TRIM28Q13263 835 aaKnown RBP12.48□□□□□ -0.41
CRLF3-202ENST00000577725 POLA2Q14181 598 aa12.48□□□□□ -0.41
CRLF3-202ENST00000577725 SUSD4Q5VX71 490 aa12.48□□□□□ -0.41
CRLF3-202ENST00000577725 OLFM4Q6UX06 510 aa12.48□□□□□ -0.41
CRLF3-202ENST00000577725 SSH3Q8TE77 659 aa12.48□□□□□ -0.41
CRLF3-202ENST00000577725 LNPKQ9C0E8 428 aa12.48□□□□□ -0.41
CRLF3-202ENST00000577725 PGAP2Q9UHJ9 254 aa12.48□□□□□ -0.41
CRLF3-202ENST00000577725 PA2G4Q9UQ80 394 aaKnown RBP12.48□□□□□ -0.41
CRLF3-202ENST00000577725 NIP7Q9Y221 180 aaKnown RBP eCLIP12.48□□□□□ -0.41
CRLF3-202ENST00000577725 PCCAP05165 728 aaPredicted RBP12.47□□□□□ -0.41
CRLF3-202ENST00000577725 NPR1P16066 1061 aa12.47□□□□□ -0.41
CRLF3-202ENST00000577725 FOXO4P98177 505 aa12.47□□□□□ -0.41
CRLF3-202ENST00000577725 NUCB1Q02818 461 aa12.47□□□□□ -0.41
CRLF3-202ENST00000577725 CDC37L1Q7L3B6 337 aa12.47□□□□□ -0.41
CRLF3-202ENST00000577725 PSMD1Q99460 953 aa12.47□□□□□ -0.41
CRLF3-202ENST00000577725 CHMP3Q9Y3E7 222 aa12.47□□□□□ -0.41
CRLF3-202ENST00000577725 LMBR1LQ6UX01 489 aa12.46□□□□□ -0.41
CRLF3-202ENST00000577725 REM2Q8IYK8 340 aaPredicted RBP12.46□□□□□ -0.41
CRLF3-202ENST00000577725 ZBTB38Q8NAP3 1195 aaPredicted RBP12.46□□□□□ -0.41
CRLF3-202ENST00000577725 KLHDC4Q8TBB5 520 aa12.46□□□□□ -0.41
CRLF3-202ENST00000577725 ZC3H15Q8WU90 426 aaKnown RBP12.46□□□□□ -0.41
CRLF3-202ENST00000577725 CCDC85AQ96PX6 553 aaPredicted RBP12.46□□□□□ -0.41
CRLF3-202ENST00000577725 CSRNP1Q96S65 589 aa12.46□□□□□ -0.41
CRLF3-202ENST00000577725 SETDB2Q96T68 719 aa12.46□□□□□ -0.41
CRLF3-202ENST00000577725 GPRC5DQ9NZD1 345 aa12.46□□□□□ -0.41
CRLF3-202ENST00000577725 TRMT112Q9UI30 125 aaKnown RBP12.46□□□□□ -0.41
CRLF3-202ENST00000577725 HDAC5Q9UQL6 1122 aa12.46□□□□□ -0.41
CRLF3-202ENST00000577725 ZNF652Q9Y2D9 606 aa12.46□□□□□ -0.41
CRLF3-202ENST00000577725 SURF6O75683 361 aaKnown RBP12.45□□□□□ -0.42
CRLF3-202ENST00000577725 ZNF157P51786 506 aaPredicted RBP12.45□□□□□ -0.42
CRLF3-202ENST00000577725 MTX1Q13505 466 aa12.45□□□□□ -0.42
CRLF3-202ENST00000577725 CHD1LQ86WJ1 897 aa12.45□□□□□ -0.42
CRLF3-202ENST00000577725 ZNF296Q8WUU4 475 aaPredicted RBP12.45□□□□□ -0.42
CRLF3-202ENST00000577725 POTEFA5A3E0 1075 aa12.44□□□□□ -0.42
CRLF3-202ENST00000577725 IRS4O14654 1257 aaPredicted RBP12.44□□□□□ -0.42
CRLF3-202ENST00000577725 NTSR2O95665 410 aa12.44□□□□□ -0.42
CRLF3-202ENST00000577725 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
CRLF3-202ENST00000577725 RABL6Q3YEC7 729 aaPredicted RBP12.44□□□□□ -0.42
CRLF3-202ENST00000577725 NUTM1Q86Y26 1132 aa12.44□□□□□ -0.42
CRLF3-202ENST00000577725 OTUD7AQ8TE49 926 aaPredicted RBP12.44□□□□□ -0.42
CRLF3-202ENST00000577725 UTP14AQ9BVJ6 771 aaKnown RBP12.44□□□□□ -0.42
CRLF3-202ENST00000577725 SIL1Q9H173 461 aa12.44□□□□□ -0.42
CRLF3-202ENST00000577725 CDHR2Q9BYE9 1310 aa12.43□□□□□ -0.42
CRLF3-202ENST00000577725 DDX60Q8IY21 1712 aaKnown RBP12.43□□□□□ -0.42
CRLF3-202ENST00000577725 MYH3P11055 1940 aa12.43□□□□□ -0.42
CRLF3-202ENST00000577725 CUL9Q8IWT3 2517 aa12.43□□□□□ -0.42
CRLF3-202ENST00000577725 RFX5P48382 616 aaPredicted RBP12.43□□□□□ -0.42
CRLF3-202ENST00000577725 OS9Q13438 667 aaPredicted RBP12.43□□□□□ -0.42
CRLF3-202ENST00000577725 PARP10Q53GL7 1025 aa12.43□□□□□ -0.42
CRLF3-202ENST00000577725 CLEC4GQ6UXB4 293 aa12.43□□□□□ -0.42
CRLF3-202ENST00000577725 COL6A3P12111 3177 aa12.42□□□□□ -0.42
CRLF3-202ENST00000577725 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
CRLF3-202ENST00000577725 COL4A5P29400 1685 aa12.42□□□□□ -0.42
CRLF3-202ENST00000577725 SLC10A3P09131 477 aa12.42□□□□□ -0.42
CRLF3-202ENST00000577725 LARGE2Q8N3Y3 721 aa12.42□□□□□ -0.42
CRLF3-202ENST00000577725 C2orf69Q8N8R5 385 aa12.42□□□□□ -0.42
CRLF3-202ENST00000577725 OTUD5Q96G74 571 aa12.42□□□□□ -0.42
CRLF3-202ENST00000577725 ZNF594Q96JF6 807 aaPredicted RBP12.42□□□□□ -0.42
CRLF3-202ENST00000577725 GBA2Q9HCG7 927 aaPredicted RBP12.42□□□□□ -0.42
CRLF3-202ENST00000577725 IL1RAPL2Q9NP60 686 aa12.42□□□□□ -0.42
CRLF3-202ENST00000577725 ZBTB47Q9UFB7 747 aaPredicted RBP12.42□□□□□ -0.42
CRLF3-202ENST00000577725 SH3TC1Q8TE82 1336 aa12.41□□□□□ -0.42
CRLF3-202ENST00000577725 LAMB2P55268 1798 aa12.41□□□□□ -0.42
CRLF3-202ENST00000577725 KLRG2A4D1S0 409 aaPredicted RBP12.41□□□□□ -0.42
CRLF3-202ENST00000577725 ALDH1B1P30837 517 aa12.41□□□□□ -0.42
CRLF3-202ENST00000577725 CTSWP56202 376 aa12.41□□□□□ -0.42
CRLF3-202ENST00000577725 SNED1Q8TER0 1413 aa12.41□□□□□ -0.42
CRLF3-202ENST00000577725 PLA2G12BQ9BX93 195 aa12.41□□□□□ -0.42
CRLF3-202ENST00000577725 LRRCC1Q9C099 1032 aa12.41□□□□□ -0.42
CRLF3-202ENST00000577725 NOP58Q9Y2X3 529 aaKnown RBP12.41□□□□□ -0.42
CRLF3-202ENST00000577725 ABCC12Q96J65 1359 aa12.41□□□□□ -0.42
CRLF3-202ENST00000577725 PDE8AO60658 829 aa12.4□□□□□ -0.42
CRLF3-202ENST00000577725 PTPN12Q05209 780 aaKnown RBP12.4□□□□□ -0.42
CRLF3-202ENST00000577725 G3BP1Q13283 466 aaKnown RBP eCLIP12.4□□□□□ -0.42
CRLF3-202ENST00000577725 NOM1Q5C9Z4 860 aaKnown RBP12.4□□□□□ -0.42
CRLF3-202ENST00000577725 CC2D2BQ6DHV5 1058 aa12.4□□□□□ -0.42
CRLF3-202ENST00000577725 C3orf67Q6ZVT6 689 aa12.4□□□□□ -0.42
CRLF3-202ENST00000577725 USP48Q86UV5 1035 aa12.4□□□□□ -0.42
CRLF3-202ENST00000577725 NIM1KQ8IY84 436 aa12.4□□□□□ -0.42
CRLF3-202ENST00000577725 RHPN1Q8TCX5 695 aa12.4□□□□□ -0.42
CRLF3-202ENST00000577725 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.4□□□□□ -0.42
CRLF3-202ENST00000577725 RGL2O15211 777 aa12.39□□□□□ -0.43
CRLF3-202ENST00000577725 RAB11FIP3O75154 756 aa12.39□□□□□ -0.43
CRLF3-202ENST00000577725 TBC1D8O95759 1140 aa12.39□□□□□ -0.43
CRLF3-202ENST00000577725 CSF1RP07333 972 aa12.39□□□□□ -0.43
CRLF3-202ENST00000577725 HIRAP54198 1017 aaPredicted RBP12.39□□□□□ -0.43
CRLF3-202ENST00000577725 NBPF5PQ86XG9 351 aaPredicted RBP12.39□□□□□ -0.43
CRLF3-202ENST00000577725 TTLL11Q8NHH1 800 aa12.39□□□□□ -0.43
CRLF3-202ENST00000577725 GREM2Q9H772 168 aa12.39□□□□□ -0.43
CRLF3-202ENST00000577725 SPEF2Q9C093 1822 aa12.39□□□□□ -0.43
CRLF3-202ENST00000577725 H0YGN5 161 aa12.38□□□□□ -0.43
CRLF3-202ENST00000577725 GPR25O00155 361 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms