RNA–Protein interactions for RNA: ENST00000577589.1

CUEDC1-205, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-205ENST00000577589 USP17L1Q7RTZ2 530 aa16.5■□□□□ 0.23
CUEDC1-205ENST00000577589 CLMNQ96JQ2 1002 aa16.5■□□□□ 0.23
CUEDC1-205ENST00000577589 MANSC4A6NHS7 340 aaPredicted RBP16.49■□□□□ 0.23
CUEDC1-205ENST00000577589 IRS4O14654 1257 aaPredicted RBP16.49■□□□□ 0.23
CUEDC1-205ENST00000577589 GJA5P36382 358 aa16.49■□□□□ 0.23
CUEDC1-205ENST00000577589 ZBED3Q96IU2 234 aaPredicted RBP16.49■□□□□ 0.23
CUEDC1-205ENST00000577589 WNK4Q96J92 1243 aa16.49■□□□□ 0.23
CUEDC1-205ENST00000577589 CHPF2Q9P2E5 772 aa16.49■□□□□ 0.23
CUEDC1-205ENST00000577589 ANKIB1Q9P2G1 1089 aa16.49■□□□□ 0.23
CUEDC1-205ENST00000577589 PLBD2Q8NHP8 589 aa16.48■□□□□ 0.23
CUEDC1-205ENST00000577589 ERO1AQ96HE7 468 aa16.48■□□□□ 0.23
CUEDC1-205ENST00000577589 ANGEL1Q9UNK9 670 aaKnown RBP16.48■□□□□ 0.23
CUEDC1-205ENST00000577589 COL1A1P02452 1464 aaPredicted RBP16.48■□□□□ 0.23
CUEDC1-205ENST00000577589 NF2P35240 595 aa16.47■□□□□ 0.23
CUEDC1-205ENST00000577589 TRIM26Q12899 539 aaPredicted RBP16.47■□□□□ 0.23
CUEDC1-205ENST00000577589 MAP3K11Q16584 847 aa16.47■□□□□ 0.23
CUEDC1-205ENST00000577589 CHRDL2Q6WN34 429 aa16.47■□□□□ 0.23
CUEDC1-205ENST00000577589 ARMC9Q7Z3E5 817 aa16.47■□□□□ 0.23
CUEDC1-205ENST00000577589 PODNQ7Z5L7 613 aa16.47■□□□□ 0.23
CUEDC1-205ENST00000577589 PTPN18Q99952 460 aa16.47■□□□□ 0.23
CUEDC1-205ENST00000577589 PRO3102Q9H379 93 aa16.47■□□□□ 0.23
CUEDC1-205ENST00000577589 EFCC1Q9HA90 598 aa16.47■□□□□ 0.23
CUEDC1-205ENST00000577589 RBM27Q9P2N5 1060 aaKnown RBP16.47■□□□□ 0.23
CUEDC1-205ENST00000577589 G3V3G9 751 aa16.46■□□□□ 0.23
CUEDC1-205ENST00000577589 ZBTB48P10074 688 aaPredicted RBP16.46■□□□□ 0.23
CUEDC1-205ENST00000577589 DCAF8Q5TAQ9 597 aa16.46■□□□□ 0.23
CUEDC1-205ENST00000577589 PCGF6Q9BYE7 350 aa16.46■□□□□ 0.23
CUEDC1-205ENST00000577589 MED23Q9ULK4 1368 aa16.46■□□□□ 0.23
CUEDC1-205ENST00000577589 XDHP47989 1333 aa16.45■□□□□ 0.22
CUEDC1-205ENST00000577589 TRIM28Q13263 835 aaKnown RBP16.45■□□□□ 0.22
CUEDC1-205ENST00000577589 PTCH2Q9Y6C5 1203 aa16.45■□□□□ 0.22
CUEDC1-205ENST00000577589 INHBEP58166 350 aa16.44■□□□□ 0.22
CUEDC1-205ENST00000577589 ANKRD13DQ6ZTN6 518 aa16.44■□□□□ 0.22
CUEDC1-205ENST00000577589 APOBEC3FQ8IUX4 373 aaKnown RBP16.44■□□□□ 0.22
CUEDC1-205ENST00000577589 SLC17A8Q8NDX2 589 aa16.44■□□□□ 0.22
CUEDC1-205ENST00000577589 BABAM1Q9NWV8 329 aa16.44■□□□□ 0.22
CUEDC1-205ENST00000577589 MYH3P11055 1940 aa16.44■□□□□ 0.22
CUEDC1-205ENST00000577589 LAMA2P24043 3122 aaKnown RBP16.43■□□□□ 0.22
CUEDC1-205ENST00000577589 SP3Q02447 781 aa16.43■□□□□ 0.22
CUEDC1-205ENST00000577589 TXNRD3Q86VQ6 643 aa16.43■□□□□ 0.22
CUEDC1-205ENST00000577589 SHISA4Q96DD7 197 aa16.43■□□□□ 0.22
CUEDC1-205ENST00000577589 VCANP13611 3396 aa16.43■□□□□ 0.22
CUEDC1-205ENST00000577589 AOX1Q06278 1338 aa16.43■□□□□ 0.22
CUEDC1-205ENST00000577589 SLC10A4Q96EP9 437 aa16.42■□□□□ 0.22
CUEDC1-205ENST00000577589 CCDC85AQ96PX6 553 aaPredicted RBP16.42■□□□□ 0.22
CUEDC1-205ENST00000577589 TMEM106CQ9BVX2 250 aa16.42■□□□□ 0.22
CUEDC1-205ENST00000577589 PCDHAC2Q9Y5I4 1007 aa16.42■□□□□ 0.22
CUEDC1-205ENST00000577589 TESPA1A2RU30 521 aaPredicted RBP16.41■□□□□ 0.22
CUEDC1-205ENST00000577589 ATP2B4P23634 1241 aa16.41■□□□□ 0.22
CUEDC1-205ENST00000577589 SLC9C1Q4G0N8 1177 aa16.41■□□□□ 0.22
CUEDC1-205ENST00000577589 STRIP1Q5VSL9 837 aa16.41■□□□□ 0.22
CUEDC1-205ENST00000577589 ZBTB38Q8NAP3 1195 aaPredicted RBP16.41■□□□□ 0.22
CUEDC1-205ENST00000577589 DEFB129Q9H1M3 183 aa16.41■□□□□ 0.22
CUEDC1-205ENST00000577589 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.41■□□□□ 0.22
CUEDC1-205ENST00000577589 SPTBN5Q9NRC6 3674 aaKnown RBP16.41■□□□□ 0.22
CUEDC1-205ENST00000577589 MYO3BQ8WXR4 1341 aa16.41■□□□□ 0.22
CUEDC1-205ENST00000577589 A0A1B0GUL6 1792 aa16.41■□□□□ 0.22
CUEDC1-205ENST00000577589 MYCP01106 439 aaPredicted RBP16.4■□□□□ 0.22
CUEDC1-205ENST00000577589 KLRK1P26718 216 aa16.4■□□□□ 0.22
CUEDC1-205ENST00000577589 OGFOD1Q8N543 542 aa16.4■□□□□ 0.22
CUEDC1-205ENST00000577589 JARID2Q92833 1246 aaPredicted RBP16.4■□□□□ 0.22
CUEDC1-205ENST00000577589 NEFMP07197 916 aa16.39■□□□□ 0.21
CUEDC1-205ENST00000577589 CCDC152Q4G0S7 254 aa16.39■□□□□ 0.21
CUEDC1-205ENST00000577589 KIAA0825Q8IV33 1275 aa16.39■□□□□ 0.21
CUEDC1-205ENST00000577589 EYSQ5T1H1 3165 aa16.39■□□□□ 0.21
CUEDC1-205ENST00000577589 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.21
CUEDC1-205ENST00000577589 CHL1O00533 1208 aa16.38■□□□□ 0.21
CUEDC1-205ENST00000577589 SOX1O00570 391 aaPredicted RBP16.38■□□□□ 0.21
CUEDC1-205ENST00000577589 SLC4A8Q2Y0W8 1093 aa16.38■□□□□ 0.21
CUEDC1-205ENST00000577589 HDGFL1Q5TGJ6 251 aa16.38■□□□□ 0.21
CUEDC1-205ENST00000577589 UBE2Q1Q7Z7E8 422 aa16.38■□□□□ 0.21
CUEDC1-205ENST00000577589 SH3TC2Q8TF17 1288 aa16.38■□□□□ 0.21
CUEDC1-205ENST00000577589 FBXW7Q969H0 707 aa16.38■□□□□ 0.21
CUEDC1-205ENST00000577589 MS4A4AQ96JQ5 239 aa16.38■□□□□ 0.21
CUEDC1-205ENST00000577589 ARHGAP39Q9C0H5 1083 aa16.38■□□□□ 0.21
CUEDC1-205ENST00000577589 RIPK4P57078 832 aa16.37■□□□□ 0.21
CUEDC1-205ENST00000577589 ANKRD18AQ8IVF6 992 aa16.37■□□□□ 0.21
CUEDC1-205ENST00000577589 CERS5Q8N5B7 392 aa16.37■□□□□ 0.21
CUEDC1-205ENST00000577589 MINPP1Q9UNW1 487 aa16.37■□□□□ 0.21
CUEDC1-205ENST00000577589 ZNF804BA4D1E1 1349 aa16.37■□□□□ 0.21
CUEDC1-205ENST00000577589 ARAP2Q8WZ64 1704 aa16.36■□□□□ 0.21
CUEDC1-205ENST00000577589 PDE8AO60658 829 aa16.36■□□□□ 0.21
CUEDC1-205ENST00000577589 PCCAP05165 728 aaPredicted RBP16.36■□□□□ 0.21
CUEDC1-205ENST00000577589 NBPF12Q5TAG4 269 aaPredicted RBP16.36■□□□□ 0.21
CUEDC1-205ENST00000577589 CNKSR2Q8WXI2 1034 aa16.36■□□□□ 0.21
CUEDC1-205ENST00000577589 BRI3BPQ8WY22 251 aa16.36■□□□□ 0.21
CUEDC1-205ENST00000577589 COA1Q9GZY4 146 aa16.36■□□□□ 0.21
CUEDC1-205ENST00000577589 DBF4Q9UBU7 674 aaPredicted RBP16.36■□□□□ 0.21
CUEDC1-205ENST00000577589 ALPK3Q96L96 1907 aa16.36■□□□□ 0.21
CUEDC1-205ENST00000577589 UNCXA6NJT0 531 aa16.35■□□□□ 0.21
CUEDC1-205ENST00000577589 USP2O75604 605 aaPredicted RBP16.35■□□□□ 0.21
CUEDC1-205ENST00000577589 TMPOP42166 694 aaKnown RBP16.35■□□□□ 0.21
CUEDC1-205ENST00000577589 CCT4P50991 539 aaKnown RBP16.35■□□□□ 0.21
CUEDC1-205ENST00000577589 HOXB7P09629 217 aa16.34■□□□□ 0.21
CUEDC1-205ENST00000577589 MMP14P50281 582 aa16.34■□□□□ 0.21
CUEDC1-205ENST00000577589 MTFR1Q15390 333 aa16.34■□□□□ 0.21
CUEDC1-205ENST00000577589 TTLL5Q6EMB2 1281 aa16.34■□□□□ 0.21
CUEDC1-205ENST00000577589 OTUD7BQ6GQQ9 843 aa16.34■□□□□ 0.21
CUEDC1-205ENST00000577589 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
CUEDC1-205ENST00000577589 CDAN1Q8IWY9 1227 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms