RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 USP17L1Q7RTZ2 530 aa17.51■□□□□ 0.39
GGA3-203ENST00000577435 AGBL3Q8NEM8 1001 aa17.51■□□□□ 0.39
GGA3-203ENST00000577435 FRAT1Q92837 279 aaPredicted RBP17.51■□□□□ 0.39
GGA3-203ENST00000577435 PUS3Q9BZE2 481 aaKnown RBP17.51■□□□□ 0.39
GGA3-203ENST00000577435 MROH5Q6ZUA9 1318 aa17.5■□□□□ 0.39
GGA3-203ENST00000577435 GNAI3P08754 354 aa17.5■□□□□ 0.39
GGA3-203ENST00000577435 RFX5P48382 616 aaPredicted RBP17.5■□□□□ 0.39
GGA3-203ENST00000577435 UBE4AQ14139 1066 aa17.5■□□□□ 0.39
GGA3-203ENST00000577435 RSBN1LQ6PCB5 846 aaPredicted RBP17.5■□□□□ 0.39
GGA3-203ENST00000577435 MICALL2Q8IY33 904 aa17.5■□□□□ 0.39
GGA3-203ENST00000577435 CNTROBQ8N137 903 aa17.5■□□□□ 0.39
GGA3-203ENST00000577435 DNAJC5GQ8N7S2 189 aa17.5■□□□□ 0.39
GGA3-203ENST00000577435 ZC3H15Q8WU90 426 aaKnown RBP17.5■□□□□ 0.39
GGA3-203ENST00000577435 GMLQ99445 158 aa17.5■□□□□ 0.39
GGA3-203ENST00000577435 SNAP23O00161 211 aa17.49■□□□□ 0.39
GGA3-203ENST00000577435 KLRK1P26718 216 aa17.49■□□□□ 0.39
GGA3-203ENST00000577435 HIRAP54198 1017 aaPredicted RBP17.49■□□□□ 0.39
GGA3-203ENST00000577435 STRIP1Q5VSL9 837 aa17.49■□□□□ 0.39
GGA3-203ENST00000577435 MEIS3Q99687 375 aa17.49■□□□□ 0.39
GGA3-203ENST00000577435 CD209Q9NNX6 404 aa17.49■□□□□ 0.39
GGA3-203ENST00000577435 FBXO3Q9UK99 471 aa17.49■□□□□ 0.39
GGA3-203ENST00000577435 PTPN12Q05209 780 aaKnown RBP17.48■□□□□ 0.39
GGA3-203ENST00000577435 MAP1SQ66K74 1059 aaPredicted RBP17.48■□□□□ 0.39
GGA3-203ENST00000577435 TNNQ9UQP3 1299 aa17.48■□□□□ 0.39
GGA3-203ENST00000577435 LRRFIP2Q9Y608 721 aaKnown RBP17.48■□□□□ 0.39
GGA3-203ENST00000577435 SHTN1A0MZ66 631 aa17.47■□□□□ 0.39
GGA3-203ENST00000577435 PLIN1O60240 522 aa17.47■□□□□ 0.39
GGA3-203ENST00000577435 IL1R1P14778 569 aa17.47■□□□□ 0.39
GGA3-203ENST00000577435 MMP14P50281 582 aa17.47■□□□□ 0.39
GGA3-203ENST00000577435 ZNF280AP59817 542 aaPredicted RBP17.47■□□□□ 0.39
GGA3-203ENST00000577435 LRRC24Q50LG9 513 aa17.47■□□□□ 0.39
GGA3-203ENST00000577435 DACT2Q5SW24 774 aa17.47■□□□□ 0.39
GGA3-203ENST00000577435 CLUAP1Q96AJ1 413 aa17.47■□□□□ 0.39
GGA3-203ENST00000577435 POLR2AP24928 1970 aaKnown RBP17.47■□□□□ 0.39
GGA3-203ENST00000577435 EYA2O00167 538 aa17.46■□□□□ 0.39
GGA3-203ENST00000577435 TTLL5Q6EMB2 1281 aa17.46■□□□□ 0.39
GGA3-203ENST00000577435 VGLL2Q8N8G2 317 aa17.46■□□□□ 0.39
GGA3-203ENST00000577435 TRPM4Q8TD43 1214 aa17.46■□□□□ 0.39
GGA3-203ENST00000577435 ZNF646O15015 1829 aaPredicted RBP17.46■□□□□ 0.39
GGA3-203ENST00000577435 MYO3BQ8WXR4 1341 aa17.46■□□□□ 0.38
GGA3-203ENST00000577435 PDE8BO95263 885 aa17.45■□□□□ 0.38
GGA3-203ENST00000577435 MTX1Q13505 466 aa17.45■□□□□ 0.38
GGA3-203ENST00000577435 SAMD7Q7Z3H4 446 aa17.45■□□□□ 0.38
GGA3-203ENST00000577435 ZNF804AQ7Z570 1209 aa17.45■□□□□ 0.38
GGA3-203ENST00000577435 TMEM57Q8N5G2 664 aa17.45■□□□□ 0.38
GGA3-203ENST00000577435 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
GGA3-203ENST00000577435 CREBZFQ9NS37 354 aa17.45■□□□□ 0.38
GGA3-203ENST00000577435 CIAO1O76071 339 aa17.44■□□□□ 0.38
GGA3-203ENST00000577435 USP17L8P0C7I0 530 aa17.44■□□□□ 0.38
GGA3-203ENST00000577435 HTRA3P83110 453 aa17.44■□□□□ 0.38
GGA3-203ENST00000577435 METTL24Q5JXM2 366 aa17.44■□□□□ 0.38
GGA3-203ENST00000577435 DZIP1LQ8IYY4 767 aaKnown RBP17.44■□□□□ 0.38
GGA3-203ENST00000577435 COPRSQ9NQ92 184 aa17.44■□□□□ 0.38
GGA3-203ENST00000577435 GNAI2P04899 355 aa17.43■□□□□ 0.38
GGA3-203ENST00000577435 GTF2IP78347 998 aa17.43■□□□□ 0.38
GGA3-203ENST00000577435 ATG9AQ7Z3C6 839 aa17.43■□□□□ 0.38
GGA3-203ENST00000577435 FBXO33Q7Z6M2 555 aa17.43■□□□□ 0.38
GGA3-203ENST00000577435 TDRD7Q8NHU6 1098 aaKnown RBP17.43■□□□□ 0.38
GGA3-203ENST00000577435 FAM84BQ96KN1 310 aaPredicted RBP17.43■□□□□ 0.38
GGA3-203ENST00000577435 TRPM7Q96QT4 1865 aa17.42■□□□□ 0.38
GGA3-203ENST00000577435 TMEM88BA6NKF7 163 aa17.42■□□□□ 0.38
GGA3-203ENST00000577435 SASH1O94885 1247 aa17.42■□□□□ 0.38
GGA3-203ENST00000577435 EGFRP00533 1210 aa17.42■□□□□ 0.38
GGA3-203ENST00000577435 FGFR2P21802 821 aa17.42■□□□□ 0.38
GGA3-203ENST00000577435 HIBADHP31937 336 aaKnown RBP17.42■□□□□ 0.38
GGA3-203ENST00000577435 FKBP1AP62942 108 aaKnown RBP17.42■□□□□ 0.38
GGA3-203ENST00000577435 KIF4BQ2VIQ3 1234 aa17.42■□□□□ 0.38
GGA3-203ENST00000577435 TBC1D10BQ4KMP7 808 aaPredicted RBP17.42■□□□□ 0.38
GGA3-203ENST00000577435 CDC37L1Q7L3B6 337 aa17.42■□□□□ 0.38
GGA3-203ENST00000577435 KLRG1Q96E93 195 aa17.42■□□□□ 0.38
GGA3-203ENST00000577435 RLBP1P12271 317 aa17.41■□□□□ 0.38
GGA3-203ENST00000577435 RBM26Q5T8P6 1007 aaKnown RBP17.41■□□□□ 0.38
GGA3-203ENST00000577435 FTSJ3Q8IY81 847 aaKnown RBP17.41■□□□□ 0.38
GGA3-203ENST00000577435 MXD3Q9BW11 206 aa17.41■□□□□ 0.38
GGA3-203ENST00000577435 FAM205AQ6ZU69 1335 aa17.41■□□□□ 0.38
GGA3-203ENST00000577435 ZBTB7BO15156 539 aaPredicted RBP17.4■□□□□ 0.38
GGA3-203ENST00000577435 MS4A1P11836 297 aa17.4■□□□□ 0.38
GGA3-203ENST00000577435 IL15P40933 162 aaPredicted RBP17.4■□□□□ 0.38
GGA3-203ENST00000577435 GYG1P46976 350 aa17.4■□□□□ 0.38
GGA3-203ENST00000577435 PUM3Q15397 648 aaKnown RBP17.4■□□□□ 0.38
GGA3-203ENST00000577435 OGFOD1Q8N543 542 aa17.4■□□□□ 0.38
GGA3-203ENST00000577435 MYOZ2Q9NPC6 264 aa17.4■□□□□ 0.38
GGA3-203ENST00000577435 SRGAP3O43295 1099 aa17.39■□□□□ 0.37
GGA3-203ENST00000577435 IFIT1P09914 478 aaKnown RBP17.39■□□□□ 0.37
GGA3-203ENST00000577435 CAVIN4Q5BKX8 364 aa17.39■□□□□ 0.37
GGA3-203ENST00000577435 LPIN2Q92539 896 aa17.39■□□□□ 0.37
GGA3-203ENST00000577435 FBXW7Q969H0 707 aa17.39■□□□□ 0.37
GGA3-203ENST00000577435 GLIS2Q9BZE0 524 aaPredicted RBP17.39■□□□□ 0.37
GGA3-203ENST00000577435 CEP126Q9P2H0 1117 aa17.39■□□□□ 0.37
GGA3-203ENST00000577435 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
GGA3-203ENST00000577435 PA2G4Q9UQ80 394 aaKnown RBP17.39■□□□□ 0.37
GGA3-203ENST00000577435 SCARF1Q14162 830 aa17.38■□□□□ 0.37
GGA3-203ENST00000577435 CST9Q5W186 159 aa17.38■□□□□ 0.37
GGA3-203ENST00000577435 CERS5Q8N5B7 392 aa17.38■□□□□ 0.37
GGA3-203ENST00000577435 JMYQ8N9B5 988 aa17.38■□□□□ 0.37
GGA3-203ENST00000577435 DCPSQ96C86 337 aaKnown RBP17.38■□□□□ 0.37
GGA3-203ENST00000577435 SIL1Q9H173 461 aa17.38■□□□□ 0.37
GGA3-203ENST00000577435 PCNTO95613 3336 aa17.38■□□□□ 0.37
GGA3-203ENST00000577435 TRAF5O00463 557 aa17.37■□□□□ 0.37
GGA3-203ENST00000577435 FMR1Q06787 632 aaKnown RBP eCLIP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms