RNA–Protein interactions for RNA: ENST00000577185.1

TTC39C-204, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3 BASIC

Gene TTC39C, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-204ENST00000577185 NPR1P16066 1061 aa9.1□□□□□ -0.95
TTC39C-204ENST00000577185 PIP4K2AP48426 406 aaPredicted RBP9.1□□□□□ -0.95
TTC39C-204ENST00000577185 U2AF1Q01081 240 aaKnown RBP eCLIP9.1□□□□□ -0.95
TTC39C-204ENST00000577185 CCDC93Q567U6 631 aa9.1□□□□□ -0.95
TTC39C-204ENST00000577185 C7orf43Q8WVR3 580 aa9.1□□□□□ -0.95
TTC39C-204ENST00000577185 KRTAP4-8Q9BYQ9 185 aa9.1□□□□□ -0.95
TTC39C-204ENST00000577185 CEP350Q5VT06 3117 aa9.1□□□□□ -0.95
TTC39C-204ENST00000577185 PRAMEF22A3QJZ6 481 aa9.09□□□□□ -0.95
TTC39C-204ENST00000577185 IQCA1LA6NCM1 817 aa9.09□□□□□ -0.95
TTC39C-204ENST00000577185 GDF11O95390 407 aa9.09□□□□□ -0.95
TTC39C-204ENST00000577185 SLC10A3P09131 477 aa9.09□□□□□ -0.95
TTC39C-204ENST00000577185 MCM10Q7L590 875 aa9.09□□□□□ -0.95
TTC39C-204ENST00000577185 NIP7Q9Y221 180 aaKnown RBP eCLIP9.09□□□□□ -0.95
TTC39C-204ENST00000577185 SCN7AQ01118 1682 aa9.09□□□□□ -0.95
TTC39C-204ENST00000577185 KLRG2A4D1S0 409 aaPredicted RBP9.08□□□□□ -0.96
TTC39C-204ENST00000577185 ZBTB24O43167 697 aaPredicted RBP9.08□□□□□ -0.96
TTC39C-204ENST00000577185 GTF2E1P29083 439 aaPredicted RBP9.08□□□□□ -0.96
TTC39C-204ENST00000577185 ALDH1B1P30837 517 aa9.08□□□□□ -0.96
TTC39C-204ENST00000577185 FKBP4Q02790 459 aaKnown RBP eCLIP9.08□□□□□ -0.96
TTC39C-204ENST00000577185 TAF7Q15545 349 aaPredicted RBP9.08□□□□□ -0.96
TTC39C-204ENST00000577185 LDHDQ86WU2 507 aa9.08□□□□□ -0.96
TTC39C-204ENST00000577185 RTKN2Q8IZC4 609 aa9.08□□□□□ -0.96
TTC39C-204ENST00000577185 ANKRD31Q8N7Z5 1873 aa9.07□□□□□ -0.96
TTC39C-204ENST00000577185 PPP2R1AP30153 589 aa9.07□□□□□ -0.96
TTC39C-204ENST00000577185 DCTN1Q14203 1278 aa9.07□□□□□ -0.96
TTC39C-204ENST00000577185 PUS10Q3MIT2 529 aaKnown RBP9.07□□□□□ -0.96
TTC39C-204ENST00000577185 NBPF10Q6P3W6 841 aaKnown RBP9.07□□□□□ -0.96
TTC39C-204ENST00000577185 NBPF15Q8N660 670 aa9.07□□□□□ -0.96
TTC39C-204ENST00000577185 MRGPRX2Q96LB1 330 aa9.07□□□□□ -0.96
TTC39C-204ENST00000577185 TAF1DQ9H5J8 278 aaPredicted RBP9.07□□□□□ -0.96
TTC39C-204ENST00000577185 MKRN1Q9UHC7 482 aaKnown RBP9.07□□□□□ -0.96
TTC39C-204ENST00000577185 TIAM2Q8IVF5 1701 aa9.07□□□□□ -0.96
TTC39C-204ENST00000577185 FAM177BA6PVY3 158 aa9.06□□□□□ -0.96
TTC39C-204ENST00000577185 NEFMP07197 916 aa9.06□□□□□ -0.96
TTC39C-204ENST00000577185 EAPPQ56P03 285 aaPredicted RBP9.06□□□□□ -0.96
TTC39C-204ENST00000577185 PNMA8AQ86V59 439 aaPredicted RBP9.06□□□□□ -0.96
TTC39C-204ENST00000577185 ZNF277Q9NRM2 450 aaPredicted RBP9.06□□□□□ -0.96
TTC39C-204ENST00000577185 HACL1Q9UJ83 578 aa9.06□□□□□ -0.96
TTC39C-204ENST00000577185 SIPA1L3O60292 1781 aaPredicted RBP9.06□□□□□ -0.96
TTC39C-204ENST00000577185 PASKQ96RG2 1323 aa9.05□□□□□ -0.96
TTC39C-204ENST00000577185 COL11A2P13942 1736 aaPredicted RBP9.05□□□□□ -0.96
TTC39C-204ENST00000577185 VIRMAQ69YN4 1812 aaKnown RBP9.05□□□□□ -0.96
TTC39C-204ENST00000577185 FER1L6Q2WGJ9 1857 aa9.05□□□□□ -0.96
TTC39C-204ENST00000577185 CNTNAP1P78357 1384 aa9.05□□□□□ -0.96
TTC39C-204ENST00000577185 TMEM88BA6NKF7 163 aa9.05□□□□□ -0.96
TTC39C-204ENST00000577185 ERVV-1B6SEH8 477 aa9.05□□□□□ -0.96
TTC39C-204ENST00000577185 EPHX2P34913 555 aa9.05□□□□□ -0.96
TTC39C-204ENST00000577185 IARSP41252 1262 aaKnown RBP9.05□□□□□ -0.96
TTC39C-204ENST00000577185 HLFQ16534 295 aa9.05□□□□□ -0.96
TTC39C-204ENST00000577185 CC2D2BQ6DHV5 1058 aa9.05□□□□□ -0.96
TTC39C-204ENST00000577185 SYNE4Q8N205 404 aa9.05□□□□□ -0.96
TTC39C-204ENST00000577185 PNISRQ8TF01 805 aaKnown RBP9.05□□□□□ -0.96
TTC39C-204ENST00000577185 NYXQ9GZU5 481 aa9.05□□□□□ -0.96
TTC39C-204ENST00000577185 FZD9O00144 591 aa9.04□□□□□ -0.96
TTC39C-204ENST00000577185 OLFM4Q6UX06 510 aa9.04□□□□□ -0.96
TTC39C-204ENST00000577185 NGEFQ8N5V2 710 aa9.04□□□□□ -0.96
TTC39C-204ENST00000577185 JDP2Q8WYK2 163 aa9.04□□□□□ -0.96
TTC39C-204ENST00000577185 MIS18AQ9NYP9 233 aa9.04□□□□□ -0.96
TTC39C-204ENST00000577185 ZNF541Q9H0D2 1346 aa9.04□□□□□ -0.96
TTC39C-204ENST00000577185 SLX4Q8IY92 1834 aa9.03□□□□□ -0.96
TTC39C-204ENST00000577185 CCDC88AQ3V6T2 1871 aa9.03□□□□□ -0.96
TTC39C-204ENST00000577185 EIF6P56537 245 aaKnown RBP9.03□□□□□ -0.96
TTC39C-204ENST00000577185 CRY2Q49AN0 593 aa9.03□□□□□ -0.96
TTC39C-204ENST00000577185 GRIPAP1Q4V328 841 aa9.03□□□□□ -0.96
TTC39C-204ENST00000577185 KIF6Q6ZMV9 814 aa9.03□□□□□ -0.96
TTC39C-204ENST00000577185 GPC2Q8N158 579 aa9.03□□□□□ -0.96
TTC39C-204ENST00000577185 AIDAQ96BJ3 306 aa9.03□□□□□ -0.96
TTC39C-204ENST00000577185 PSMD1Q99460 953 aa9.03□□□□□ -0.96
TTC39C-204ENST00000577185 RRP7AQ9Y3A4 280 aaKnown RBP9.03□□□□□ -0.96
TTC39C-204ENST00000577185 BCORQ6W2J9 1755 aa9.03□□□□□ -0.96
TTC39C-204ENST00000577185 MAP3K15Q6ZN16 1313 aa9.03□□□□□ -0.96
TTC39C-204ENST00000577185 DICER1Q9UPY3 1922 aaKnown RBP9.02□□□□□ -0.97
TTC39C-204ENST00000577185 RCCD1A6NED2 376 aa9.02□□□□□ -0.97
TTC39C-204ENST00000577185 FOXN1O15353 648 aa9.02□□□□□ -0.97
TTC39C-204ENST00000577185 HOXA10P31260 410 aaPredicted RBP9.02□□□□□ -0.97
TTC39C-204ENST00000577185 CTCFP49711 727 aaPredicted RBP9.02□□□□□ -0.97
TTC39C-204ENST00000577185 EIF4A1P60842 406 aaKnown RBP9.02□□□□□ -0.97
TTC39C-204ENST00000577185 NUTM1Q86Y26 1132 aa9.02□□□□□ -0.97
TTC39C-204ENST00000577185 CNTROBQ8N137 903 aa9.02□□□□□ -0.97
TTC39C-204ENST00000577185 FAM160A2Q8N612 972 aaPredicted RBP9.02□□□□□ -0.97
TTC39C-204ENST00000577185 RPGRQ92834 1020 aaKnown RBP9.02□□□□□ -0.97
TTC39C-204ENST00000577185 RBM17Q96I25 401 aaKnown RBP9.02□□□□□ -0.97
TTC39C-204ENST00000577185 PNNQ9H307 717 aaKnown RBP9.02□□□□□ -0.97
TTC39C-204ENST00000577185 PRDM10Q9NQV6 1147 aa9.02□□□□□ -0.97
TTC39C-204ENST00000577185 RNF123Q5XPI4 1314 aa9.02□□□□□ -0.97
TTC39C-204ENST00000577185 MYL6BP14649 208 aa9.01□□□□□ -0.97
TTC39C-204ENST00000577185 GPTP24298 496 aa9.01□□□□□ -0.97
TTC39C-204ENST00000577185 LMOD1P29536 600 aaPredicted RBP9.01□□□□□ -0.97
TTC39C-204ENST00000577185 NFE2L2Q16236 605 aa9.01□□□□□ -0.97
TTC39C-204ENST00000577185 DEFB115Q30KQ5 88 aa9.01□□□□□ -0.97
TTC39C-204ENST00000577185 TTLL7Q6ZT98 887 aa9.01□□□□□ -0.97
TTC39C-204ENST00000577185 THAP11Q96EK4 314 aa9.01□□□□□ -0.97
TTC39C-204ENST00000577185 CRAMP1Q96RY5 1269 aa9.01□□□□□ -0.97
TTC39C-204ENST00000577185 TMX4Q9H1E5 349 aaPredicted RBP9.01□□□□□ -0.97
TTC39C-204ENST00000577185 ZBTB3Q9H5J0 574 aa9.01□□□□□ -0.97
TTC39C-204ENST00000577185 GJA3Q9Y6H8 435 aa9.01□□□□□ -0.97
TTC39C-204ENST00000577185 ARFGEF2Q9Y6D5 1785 aa9.01□□□□□ -0.97
TTC39C-204ENST00000577185 ABCC12Q96J65 1359 aa9□□□□□ -0.97
TTC39C-204ENST00000577185 IBTKQ9P2D0 1353 aaPredicted RBP9□□□□□ -0.97
TTC39C-204ENST00000577185 RASSF10A6NK89 507 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms