RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 GJA3Q9Y6H8 435 aa7.35□□□□□ -1.23
CTNS-210ENST00000576979 ERVK-7P63135 1459 aa7.35□□□□□ -1.23
CTNS-210ENST00000576979 PLEKHH1Q9ULM0 1364 aa7.34□□□□□ -1.23
CTNS-210ENST00000576979 LMTK2Q8IWU2 1503 aa7.34□□□□□ -1.23
CTNS-210ENST00000576979 C9orf172C9J069 976 aa7.34□□□□□ -1.23
CTNS-210ENST00000576979 KIF3BO15066 747 aa7.34□□□□□ -1.23
CTNS-210ENST00000576979 GDF10P55107 478 aa7.34□□□□□ -1.23
CTNS-210ENST00000576979 NRG1Q02297 640 aaPredicted RBP7.34□□□□□ -1.23
CTNS-210ENST00000576979 TRAIPQ9BWF2 469 aa7.34□□□□□ -1.23
CTNS-210ENST00000576979 GOPCQ9HD26 462 aa7.34□□□□□ -1.23
CTNS-210ENST00000576979 ZNF330Q9Y3S2 320 aaPredicted RBP7.34□□□□□ -1.23
CTNS-210ENST00000576979 PARP3Q9Y6F1 533 aa7.34□□□□□ -1.23
CTNS-210ENST00000576979 NKTRP30414 1462 aaKnown RBP7.34□□□□□ -1.23
CTNS-210ENST00000576979 SHPRHQ149N8 1683 aa7.34□□□□□ -1.23
CTNS-210ENST00000576979 NINLQ9Y2I6 1382 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 ADGRB3O60242 1522 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 SIN3BO75182 1162 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 INHAP05111 366 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 ELNP15502 786 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 TMEM259Q4ZIN3 620 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 OXLD1Q5BKU9 147 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 TRAPPC3LQ5T215 181 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 SAMD5Q5TGI4 173 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 DUSP27Q5VZP5 1158 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 RAB44Q7Z6P3 723 aaPredicted RBP7.33□□□□□ -1.24
CTNS-210ENST00000576979 AFAP1Q8N556 730 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 ZNF592Q92610 1267 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 DOLKQ9UPQ8 538 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 UGGT1Q9NYU2 1555 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 HECW2Q9P2P5 1572 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 SBNO2Q9Y2G9 1366 aa7.33□□□□□ -1.24
CTNS-210ENST00000576979 ZNF518AQ6AHZ1 1483 aa7.32□□□□□ -1.24
CTNS-210ENST00000576979 CAMSAP1Q5T5Y3 1602 aa7.32□□□□□ -1.24
CTNS-210ENST00000576979 TATP17735 454 aaPredicted RBP7.32□□□□□ -1.24
CTNS-210ENST00000576979 SMTNP53814 917 aa7.32□□□□□ -1.24
CTNS-210ENST00000576979 SLFN5Q08AF3 891 aa7.32□□□□□ -1.24
CTNS-210ENST00000576979 C20orf204Q6ZNR8 217 aa7.32□□□□□ -1.24
CTNS-210ENST00000576979 SSBP4Q9BWG4 385 aaPredicted RBP7.32□□□□□ -1.24
CTNS-210ENST00000576979 USP35Q9P2H5 1018 aa7.32□□□□□ -1.24
CTNS-210ENST00000576979 SERTAD1Q9UHV2 236 aa7.32□□□□□ -1.24
CTNS-210ENST00000576979 ARHGEF28Q8N1W1 1705 aaKnown RBP7.32□□□□□ -1.24
CTNS-210ENST00000576979 ZNF521Q96K83 1311 aa7.31□□□□□ -1.24
CTNS-210ENST00000576979 NRXN1Q9ULB1 1477 aa7.31□□□□□ -1.24
CTNS-210ENST00000576979 A0A0A0MRY4 1105 aa7.31□□□□□ -1.24
CTNS-210ENST00000576979 E9PSI1 815 aa7.31□□□□□ -1.24
CTNS-210ENST00000576979 PAX4O43316 350 aa7.31□□□□□ -1.24
CTNS-210ENST00000576979 ADH7P40394 386 aa7.31□□□□□ -1.24
CTNS-210ENST00000576979 USP4Q13107 963 aa7.31□□□□□ -1.24
CTNS-210ENST00000576979 LAMC2Q13753 1193 aa7.31□□□□□ -1.24
CTNS-210ENST00000576979 TNFRSF25Q93038 417 aa7.31□□□□□ -1.24
CTNS-210ENST00000576979 PCMTD1Q96MG8 357 aaPredicted RBP7.31□□□□□ -1.24
CTNS-210ENST00000576979 IQSEC3Q9UPP2 1182 aaPredicted RBP7.31□□□□□ -1.24
CTNS-210ENST00000576979 ANKRD26Q9UPS8 1709 aa7.31□□□□□ -1.24
CTNS-210ENST00000576979 KDM2BQ8NHM5 1336 aa7.3□□□□□ -1.24
CTNS-210ENST00000576979 CENPJQ9HC77 1338 aaPredicted RBP7.3□□□□□ -1.24
CTNS-210ENST00000576979 CANXP27824 592 aaKnown RBP7.3□□□□□ -1.24
CTNS-210ENST00000576979 TXLNAP40222 546 aa7.3□□□□□ -1.24
CTNS-210ENST00000576979 SFSWAPQ12872 951 aaKnown RBP7.3□□□□□ -1.24
CTNS-210ENST00000576979 CFAP70Q5T0N1 1121 aa7.3□□□□□ -1.24
CTNS-210ENST00000576979 BICDL1Q6ZP65 573 aa7.3□□□□□ -1.24
CTNS-210ENST00000576979 CCDC146Q8IYE0 955 aa7.3□□□□□ -1.24
CTNS-210ENST00000576979 LENG1Q96BZ8 264 aaPredicted RBP7.3□□□□□ -1.24
CTNS-210ENST00000576979 CCDC97Q96F63 343 aaPredicted RBP7.3□□□□□ -1.24
CTNS-210ENST00000576979 ZDHHC3Q9NYG2 299 aa7.3□□□□□ -1.24
CTNS-210ENST00000576979 RNF112Q9ULX5 631 aa7.3□□□□□ -1.24
CTNS-210ENST00000576979 POLR3AO14802 1390 aaPredicted RBP7.3□□□□□ -1.24
CTNS-210ENST00000576979 GLI2P10070 1586 aa7.29□□□□□ -1.24
CTNS-210ENST00000576979 NOS1P29475 1434 aa7.29□□□□□ -1.24
CTNS-210ENST00000576979 ASXL2Q76L83 1435 aa7.29□□□□□ -1.24
CTNS-210ENST00000576979 APAF1O14727 1248 aa7.29□□□□□ -1.24
CTNS-210ENST00000576979 RAD21O60216 631 aa7.29□□□□□ -1.24
CTNS-210ENST00000576979 NEFMP07197 916 aa7.29□□□□□ -1.24
CTNS-210ENST00000576979 YBX3P16989 372 aaKnown RBP eCLIP7.29□□□□□ -1.24
CTNS-210ENST00000576979 MCM6Q14566 821 aa7.29□□□□□ -1.24
CTNS-210ENST00000576979 C20orf194Q5TEA3 1177 aa7.29□□□□□ -1.24
CTNS-210ENST00000576979 LRRC69Q6ZNQ3 347 aa7.29□□□□□ -1.24
CTNS-210ENST00000576979 PHTF2Q8N3S3 785 aa7.29□□□□□ -1.24
CTNS-210ENST00000576979 FMNL2Q96PY5 1086 aa7.29□□□□□ -1.24
CTNS-210ENST00000576979 LAS1LQ9Y4W2 734 aaKnown RBP7.29□□□□□ -1.24
CTNS-210ENST00000576979 MYO5BQ9ULV0 1848 aa7.29□□□□□ -1.24
CTNS-210ENST00000576979 CGNL1Q0VF96 1302 aa7.28□□□□□ -1.24
CTNS-210ENST00000576979 ADGRF5Q8IZF2 1346 aa7.28□□□□□ -1.24
CTNS-210ENST00000576979 NSD3Q9BZ95 1437 aa7.28□□□□□ -1.24
CTNS-210ENST00000576979 TXKP42681 527 aa7.28□□□□□ -1.24
CTNS-210ENST00000576979 MORC1Q86VD1 984 aa7.28□□□□□ -1.24
CTNS-210ENST00000576979 PROSER2Q86WR7 435 aaPredicted RBP7.28□□□□□ -1.24
CTNS-210ENST00000576979 TRMT2AQ8IZ69 625 aaKnown RBP7.28□□□□□ -1.24
CTNS-210ENST00000576979 CFAP53Q96M91 514 aa7.28□□□□□ -1.24
CTNS-210ENST00000576979 CABP1Q9NZU7 370 aa7.28□□□□□ -1.24
CTNS-210ENST00000576979 SERPINA10Q9UK55 444 aa7.28□□□□□ -1.24
CTNS-210ENST00000576979 RPGRIP1LQ68CZ1 1315 aa7.27□□□□□ -1.24
CTNS-210ENST00000576979 KIF20BQ96Q89 1820 aa7.27□□□□□ -1.25
CTNS-210ENST00000576979 PDE3AQ14432 1141 aa7.27□□□□□ -1.25
CTNS-210ENST00000576979 AEBP1Q8IUX7 1158 aa7.27□□□□□ -1.25
CTNS-210ENST00000576979 KRTAP4-9Q9BYQ8 210 aa7.27□□□□□ -1.25
CTNS-210ENST00000576979 PCMTD2Q9NV79 361 aa7.27□□□□□ -1.25
CTNS-210ENST00000576979 SIGLEC1Q9BZZ2 1709 aa7.27□□□□□ -1.25
CTNS-210ENST00000576979 PIK3C2BO00750 1634 aa7.27□□□□□ -1.25
CTNS-210ENST00000576979 IQSEC2Q5JU85 1478 aa7.26□□□□□ -1.25
CTNS-210ENST00000576979 MLH3Q9UHC1 1453 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms