RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 ATP2B2Q01814 1243 aa8.7□□□□□ -1.02
CDC27-219ENST00000576484 FOXD4L4Q8WXT5 416 aaPredicted RBP8.7□□□□□ -1.02
CDC27-219ENST00000576484 HHIPQ96QV1 700 aa8.7□□□□□ -1.02
CDC27-219ENST00000576484 PLVAPQ9BX97 442 aa8.7□□□□□ -1.02
CDC27-219ENST00000576484 JPH1Q9HDC5 661 aaPredicted RBP8.7□□□□□ -1.02
CDC27-219ENST00000576484 DZANK1Q9NVP4 752 aa8.7□□□□□ -1.02
CDC27-219ENST00000576484 A0A1W2PP55 124 aa8.69□□□□□ -1.02
CDC27-219ENST00000576484 NFKBIEO00221 500 aa8.69□□□□□ -1.02
CDC27-219ENST00000576484 PIK3R2O00459 728 aa8.69□□□□□ -1.02
CDC27-219ENST00000576484 RGS9O75916 674 aaPredicted RBP8.69□□□□□ -1.02
CDC27-219ENST00000576484 OSMRQ99650 979 aa8.69□□□□□ -1.02
CDC27-219ENST00000576484 BCL2L13Q9BXK5 485 aa8.69□□□□□ -1.02
CDC27-219ENST00000576484 RBSNQ9H1K0 784 aa8.69□□□□□ -1.02
CDC27-219ENST00000576484 RNF19AQ9NV58 838 aa8.69□□□□□ -1.02
CDC27-219ENST00000576484 LILRB5O75023 590 aa8.68□□□□□ -1.02
CDC27-219ENST00000576484 PRPF40AO75400 957 aaKnown RBP8.68□□□□□ -1.02
CDC27-219ENST00000576484 ALG1LQ6GMV1 187 aa8.68□□□□□ -1.02
CDC27-219ENST00000576484 ADAMTSL4Q6UY14 1074 aa8.68□□□□□ -1.02
CDC27-219ENST00000576484 FBF1Q8TES7 1133 aa8.68□□□□□ -1.02
CDC27-219ENST00000576484 GIPC2Q8TF65 315 aa8.68□□□□□ -1.02
CDC27-219ENST00000576484 TRIM11Q96F44 468 aa8.68□□□□□ -1.02
CDC27-219ENST00000576484 DCAF5Q96JK2 942 aa8.68□□□□□ -1.02
CDC27-219ENST00000576484 PBX4Q9BYU1 374 aa8.68□□□□□ -1.02
CDC27-219ENST00000576484 TRIM33Q9UPN9 1127 aa8.68□□□□□ -1.02
CDC27-219ENST00000576484 COL8A1P27658 744 aa8.67□□□□□ -1.02
CDC27-219ENST00000576484 GRIK5Q16478 980 aa8.67□□□□□ -1.02
CDC27-219ENST00000576484 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.67□□□□□ -1.02
CDC27-219ENST00000576484 KIAA0319Q5VV43 1072 aa8.67□□□□□ -1.02
CDC27-219ENST00000576484 CEP135Q66GS9 1140 aa8.67□□□□□ -1.02
CDC27-219ENST00000576484 AFF1P51825 1210 aaKnown RBP8.66□□□□□ -1.02
CDC27-219ENST00000576484 TRAPPC3LQ5T215 181 aa8.66□□□□□ -1.02
CDC27-219ENST00000576484 TTC9Q92623 222 aa8.66□□□□□ -1.02
CDC27-219ENST00000576484 DUSP9Q99956 384 aaKnown RBP8.66□□□□□ -1.02
CDC27-219ENST00000576484 NOP53Q9NZM5 478 aaKnown RBP8.66□□□□□ -1.02
CDC27-219ENST00000576484 FAM229AH3BQW9 127 aa8.65□□□□□ -1.02
CDC27-219ENST00000576484 GADD45BO75293 160 aaPredicted RBP8.65□□□□□ -1.02
CDC27-219ENST00000576484 SMNDC1O75940 238 aaKnown RBP eCLIP8.65□□□□□ -1.02
CDC27-219ENST00000576484 COL9A3Q14050 684 aaPredicted RBP8.65□□□□□ -1.02
CDC27-219ENST00000576484 GRM2Q14416 872 aa8.65□□□□□ -1.02
CDC27-219ENST00000576484 TMEM102Q8N9M5 508 aaPredicted RBP8.65□□□□□ -1.02
CDC27-219ENST00000576484 TCF12Q99081 682 aa8.65□□□□□ -1.02
CDC27-219ENST00000576484 POP1Q99575 1024 aaKnown RBP8.65□□□□□ -1.02
CDC27-219ENST00000576484 BHLHE41Q9C0J9 482 aaPredicted RBP8.65□□□□□ -1.02
CDC27-219ENST00000576484 EHD4Q9H223 541 aa8.65□□□□□ -1.02
CDC27-219ENST00000576484 LIN7BQ9HAP6 207 aa8.65□□□□□ -1.02
CDC27-219ENST00000576484 PRDM6Q9NQX0 595 aa8.65□□□□□ -1.02
CDC27-219ENST00000576484 NLRP2Q9NX02 1062 aa8.65□□□□□ -1.02
CDC27-219ENST00000576484 METTL12A8MUP2 240 aa8.64□□□□□ -1.03
CDC27-219ENST00000576484 PDE2AO00408 941 aaPredicted RBP8.64□□□□□ -1.03
CDC27-219ENST00000576484 ZNF16P17020 682 aaPredicted RBP8.64□□□□□ -1.03
CDC27-219ENST00000576484 GDF6Q6KF10 455 aaPredicted RBP8.64□□□□□ -1.03
CDC27-219ENST00000576484 GPAT2Q6NUI2 795 aa8.64□□□□□ -1.03
CDC27-219ENST00000576484 NXPE3Q969Y0 559 aa8.64□□□□□ -1.03
CDC27-219ENST00000576484 NID1P14543 1247 aa8.63□□□□□ -1.03
CDC27-219ENST00000576484 CCNJLQ8IV13 435 aa8.63□□□□□ -1.03
CDC27-219ENST00000576484 GLIS3Q8NEA6 775 aa8.63□□□□□ -1.03
CDC27-219ENST00000576484 LACRTQ9GZZ8 138 aa8.63□□□□□ -1.03
CDC27-219ENST00000576484 PARP2Q9UGN5 583 aa8.63□□□□□ -1.03
CDC27-219ENST00000576484 RBM47A0AV96 593 aaKnown RBP8.62□□□□□ -1.03
CDC27-219ENST00000576484 KRBA1A5PL33 1030 aa8.62□□□□□ -1.03
CDC27-219ENST00000576484 SPDYE3A6NKU9 549 aa8.62□□□□□ -1.03
CDC27-219ENST00000576484 GNA15P30679 374 aa8.62□□□□□ -1.03
CDC27-219ENST00000576484 FGD1P98174 961 aa8.62□□□□□ -1.03
CDC27-219ENST00000576484 PRPF40BQ6NWY9 871 aaKnown RBP8.62□□□□□ -1.03
CDC27-219ENST00000576484 DMRTC2Q8IXT2 367 aaPredicted RBP8.62□□□□□ -1.03
CDC27-219ENST00000576484 FAM161BQ96MY7 647 aa8.62□□□□□ -1.03
CDC27-219ENST00000576484 BCO2Q9BYV7 579 aa8.62□□□□□ -1.03
CDC27-219ENST00000576484 OSBPL7Q9BZF2 842 aa8.62□□□□□ -1.03
CDC27-219ENST00000576484 ABCB6Q9NP58 842 aa8.62□□□□□ -1.03
CDC27-219ENST00000576484 BAG6P46379 1132 aa8.61□□□□□ -1.03
CDC27-219ENST00000576484 GRIA4P48058 902 aa8.61□□□□□ -1.03
CDC27-219ENST00000576484 TRIM28Q13263 835 aaKnown RBP8.61□□□□□ -1.03
CDC27-219ENST00000576484 PRRT3Q5FWE3 981 aa8.61□□□□□ -1.03
CDC27-219ENST00000576484 NXPE4Q6UWF7 544 aa8.61□□□□□ -1.03
CDC27-219ENST00000576484 ASAP3Q8TDY4 903 aa8.61□□□□□ -1.03
CDC27-219ENST00000576484 SPG7Q9UQ90 795 aa8.61□□□□□ -1.03
CDC27-219ENST00000576484 PTPRAP18433 802 aa8.6□□□□□ -1.03
CDC27-219ENST00000576484 ZNF326Q5BKZ1 582 aaKnown RBP8.6□□□□□ -1.03
CDC27-219ENST00000576484 SOX13Q9UN79 622 aa8.6□□□□□ -1.03
CDC27-219ENST00000576484 TRAK1Q9UPV9 953 aa8.6□□□□□ -1.03
CDC27-219ENST00000576484 EPHA1P21709 976 aa8.59□□□□□ -1.03
CDC27-219ENST00000576484 DAB2P98082 770 aa8.59□□□□□ -1.03
CDC27-219ENST00000576484 XPCQ01831 940 aaPredicted RBP8.59□□□□□ -1.03
CDC27-219ENST00000576484 SPRED3Q2MJR0 410 aa8.59□□□□□ -1.03
CDC27-219ENST00000576484 PLA2G4EQ3MJ16 856 aa8.59□□□□□ -1.03
CDC27-219ENST00000576484 MSL1Q68DK7 614 aa8.59□□□□□ -1.03
CDC27-219ENST00000576484 IL22RA1Q8N6P7 574 aa8.59□□□□□ -1.03
CDC27-219ENST00000576484 ADAM19Q9H013 955 aa8.59□□□□□ -1.03
CDC27-219ENST00000576484 MUC3BQ9H195 1237 aa8.59□□□□□ -1.03
CDC27-219ENST00000576484 C12orf49Q9H741 205 aa8.59□□□□□ -1.03
CDC27-219ENST00000576484 SH2B1Q9NRF2 756 aaPredicted RBP8.59□□□□□ -1.03
CDC27-219ENST00000576484 A0A096LPE4 126 aa8.58□□□□□ -1.04
CDC27-219ENST00000576484 TMEM238LA0A1B0GVL6 79 aa8.58□□□□□ -1.04
CDC27-219ENST00000576484 A0A1W2PPZ6 126 aa8.58□□□□□ -1.04
CDC27-219ENST00000576484 CDC27P30260 824 aa8.58□□□□□ -1.04
CDC27-219ENST00000576484 PSMD2Q13200 908 aa8.58□□□□□ -1.04
CDC27-219ENST00000576484 ILDR2Q71H61 639 aa8.58□□□□□ -1.04
CDC27-219ENST00000576484 TMC4Q7Z404 712 aa8.58□□□□□ -1.04
CDC27-219ENST00000576484 WFDC8Q8IUA0 241 aa8.58□□□□□ -1.04
CDC27-219ENST00000576484 BSNDQ8WZ55 320 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms