RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 TMOD3Q9NYL9 352 aa20.52■□□□□ 0.87
ATPAF1-214ENST00000576409 ANKRD18BA2A2Z9 1011 aa20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 IGHMBP2P38935 993 aaKnown RBP20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 CACTINQ8WUQ7 758 aaKnown RBP20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 PHKBQ93100 1093 aa20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 ERO1AQ96HE7 468 aa20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 LSG1Q9H089 658 aaKnown RBP20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 TLR7Q9NYK1 1049 aaKnown RBP20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 CAPN2P17655 700 aa20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 SPA17Q15506 151 aa20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 TNNI3KQ59H18 835 aa20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 GBP3Q9H0R5 595 aa20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 FPGT-TNNI3KV9GXZ4 949 aa20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 ZNF853P0CG23 659 aa20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 FKBP15Q5T1M5 1219 aa20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 SOGA3Q5TF21 947 aa20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 TAX1BP1Q86VP1 789 aa20.51■□□□□ 0.87
ATPAF1-214ENST00000576409 RNMTO43148 476 aaKnown RBP20.5■□□□□ 0.87
ATPAF1-214ENST00000576409 TDRD12Q587J7 1177 aaKnown RBP20.5■□□□□ 0.87
ATPAF1-214ENST00000576409 ZNF569Q5MCW4 686 aa20.5■□□□□ 0.87
ATPAF1-214ENST00000576409 RRAGBQ5VZM2 374 aa20.5■□□□□ 0.87
ATPAF1-214ENST00000576409 VAT1LQ9HCJ6 419 aa20.5■□□□□ 0.87
ATPAF1-214ENST00000576409 MAPK8IP1Q9UQF2 711 aa20.5■□□□□ 0.87
ATPAF1-214ENST00000576409 FANCCQ00597 558 aa20.5■□□□□ 0.87
ATPAF1-214ENST00000576409 IQCA1Q86XH1 822 aa20.5■□□□□ 0.87
ATPAF1-214ENST00000576409 CAPZA3Q96KX2 299 aa20.5■□□□□ 0.87
ATPAF1-214ENST00000576409 VPS18Q9P253 973 aa20.5■□□□□ 0.87
ATPAF1-214ENST00000576409 RNF113AO15541 343 aaKnown RBP20.5■□□□□ 0.87
ATPAF1-214ENST00000576409 YEATS4O95619 227 aa20.5■□□□□ 0.87
ATPAF1-214ENST00000576409 IPO4Q8TEX9 1081 aaKnown RBP20.5■□□□□ 0.87
ATPAF1-214ENST00000576409 GOLGA6L10A6NI86 522 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 ARID5BQ14865 1188 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 DNAJC21Q5F1R6 531 aaKnown RBP20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 MIGA1Q8NAN2 632 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 PLIN2Q99541 437 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 ZNF202O95125 648 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 GCP02774 474 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 IL15P40933 162 aaPredicted RBP20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 MTIF2P46199 727 aaKnown RBP20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 KIAA1524Q8TCG1 905 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 STAMQ92783 540 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 MRVI1Q9Y6F6 885 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 IBTKQ9P2D0 1353 aaPredicted RBP20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 B4E1Z4 1266 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 EIF4A1P60842 406 aaKnown RBP20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 PROSER3Q2NL68 480 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 TRMT44Q8IYL2 757 aaKnown RBP20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 RABEP2Q9H5N1 569 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 SEPT11Q9NVA2 429 aaKnown RBP20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 GUCA1BQ9UMX6 200 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 WTAPQ15007 396 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 FAM89AQ96GI7 184 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 ZSWIM6Q9HCJ5 1215 aa20.49■□□□□ 0.87
ATPAF1-214ENST00000576409 EIF4G3O43432 1585 aaKnown RBP20.48■□□□□ 0.87
ATPAF1-214ENST00000576409 CDR1P51861 262 aa20.48■□□□□ 0.87
ATPAF1-214ENST00000576409 MYL5Q02045 173 aa20.48■□□□□ 0.87
ATPAF1-214ENST00000576409 EDC4Q6P2E9 1401 aaKnown RBP20.48■□□□□ 0.87
ATPAF1-214ENST00000576409 A0A1B0GUL7 405 aa20.48■□□□□ 0.87
ATPAF1-214ENST00000576409 CCT6AP40227 531 aaKnown RBP20.48■□□□□ 0.87
ATPAF1-214ENST00000576409 LONRF3Q496Y0 759 aa20.48■□□□□ 0.87
ATPAF1-214ENST00000576409 CTR9Q6PD62 1173 aa20.48■□□□□ 0.87
ATPAF1-214ENST00000576409 CCDC191Q8NCU4 936 aa20.48■□□□□ 0.87
ATPAF1-214ENST00000576409 KDM5AP29375 1690 aaKnown RBP20.48■□□□□ 0.87
ATPAF1-214ENST00000576409 CACNA2D4Q7Z3S7 1137 aa20.48■□□□□ 0.87
ATPAF1-214ENST00000576409 UBA7P41226 1012 aa20.47■□□□□ 0.87
ATPAF1-214ENST00000576409 BAG1Q99933 345 aaPredicted RBP20.47■□□□□ 0.87
ATPAF1-214ENST00000576409 OSBPL3Q9H4L5 887 aa20.47■□□□□ 0.87
ATPAF1-214ENST00000576409 MKNK2Q9HBH9 465 aa20.47■□□□□ 0.87
ATPAF1-214ENST00000576409 BCCIPQ9P287 314 aaKnown RBP eCLIP20.47■□□□□ 0.87
ATPAF1-214ENST00000576409 PRDM15P57071 1507 aaPredicted RBP20.47■□□□□ 0.87
ATPAF1-214ENST00000576409 PRAMEF22A3QJZ6 481 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 MYO1BO43795 1136 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 CCDC175P0C221 793 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 RTN1Q16799 776 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 CCDC194A0A1B0GVG4 234 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 hCG_1642624A0A1W2PR95 340 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 CTAGE15A4D2H0 777 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 CTAGE8P0CG41 777 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 TRIM21P19474 475 aaKnown RBP20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 GOLGA8FQ08AF8 430 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 GOLGA8DPQ0D2H9 430 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 CTAGE6Q86UF2 777 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 CTAGE4Q8IX94 777 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 CCDC43Q96MW1 224 aaKnown RBP20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 UHRF1BP1LA0JNW5 1464 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 GOLGA6L9A6NEM1 432 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 PPP2R3AQ06190 1150 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 ANO1Q5XXA6 986 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 RGS12O14924 1447 aa20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 ZNF589Q86UQ0 364 aaPredicted RBP20.46■□□□□ 0.87
ATPAF1-214ENST00000576409 KIF20AO95235 890 aa20.45■□□□□ 0.86
ATPAF1-214ENST00000576409 CATIPQ7Z7H3 387 aa20.45■□□□□ 0.86
ATPAF1-214ENST00000576409 TRIM47Q96LD4 638 aa20.45■□□□□ 0.86
ATPAF1-214ENST00000576409 TM6SF1Q9BZW5 370 aa20.45■□□□□ 0.86
ATPAF1-214ENST00000576409 TCEAL9Q9UHQ7 104 aa20.45■□□□□ 0.86
ATPAF1-214ENST00000576409 ADGBQ8N7X0 1667 aa20.45■□□□□ 0.86
ATPAF1-214ENST00000576409 CEP170Q5SW79 1584 aa20.45■□□□□ 0.86
ATPAF1-214ENST00000576409 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.45■□□□□ 0.86
ATPAF1-214ENST00000576409 BEND3Q5T5X7 828 aa20.45■□□□□ 0.86
ATPAF1-214ENST00000576409 GDAP1L1Q96MZ0 367 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms