RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 HSP90AB3PQ58FF7 597 aa16.64■□□□□ 0.25
RAB40B-211ENST00000576359 TTLL5Q6EMB2 1281 aa16.64■□□□□ 0.25
RAB40B-211ENST00000576359 DHX32Q7L7V1 743 aaKnown RBP16.64■□□□□ 0.25
RAB40B-211ENST00000576359 FAM184AQ8NB25 1140 aa16.64■□□□□ 0.25
RAB40B-211ENST00000576359 E7EWF7 191 aa16.64■□□□□ 0.25
RAB40B-211ENST00000576359 IRS4O14654 1257 aaPredicted RBP16.64■□□□□ 0.25
RAB40B-211ENST00000576359 EXOSC10Q01780 885 aaKnown RBP16.64■□□□□ 0.25
RAB40B-211ENST00000576359 SCRN1Q12765 414 aa16.64■□□□□ 0.25
RAB40B-211ENST00000576359 METTL24Q5JXM2 366 aa16.64■□□□□ 0.25
RAB40B-211ENST00000576359 LDHAL6AQ6ZMR3 332 aa16.64■□□□□ 0.25
RAB40B-211ENST00000576359 TRMT112Q9UI30 125 aaKnown RBP16.64■□□□□ 0.25
RAB40B-211ENST00000576359 HMGB1P09429 215 aaKnown RBP16.63■□□□□ 0.25
RAB40B-211ENST00000576359 HSP90B1P14625 803 aaKnown RBP16.63■□□□□ 0.25
RAB40B-211ENST00000576359 KRT85P78386 507 aa16.63■□□□□ 0.25
RAB40B-211ENST00000576359 ATP2B3Q16720 1220 aa16.63■□□□□ 0.25
RAB40B-211ENST00000576359 TTC6Q86TZ1 520 aa16.63■□□□□ 0.25
RAB40B-211ENST00000576359 DZIP3Q86Y13 1208 aaKnown RBP16.63■□□□□ 0.25
RAB40B-211ENST00000576359 VGLL2Q8N8G2 317 aa16.63■□□□□ 0.25
RAB40B-211ENST00000576359 AKAP11Q9UKA4 1901 aa16.63■□□□□ 0.25
RAB40B-211ENST00000576359 AGXT2Q9BYV1 514 aa16.63■□□□□ 0.25
RAB40B-211ENST00000576359 NRAPQ86VF7 1730 aa16.63■□□□□ 0.25
RAB40B-211ENST00000576359 HCLS1P14317 486 aaPredicted RBP16.62■□□□□ 0.25
RAB40B-211ENST00000576359 IL6STP40189 918 aaPredicted RBP16.62■□□□□ 0.25
RAB40B-211ENST00000576359 CCDC39Q9UFE4 941 aa16.62■□□□□ 0.25
RAB40B-211ENST00000576359 MYH7P12883 1935 aa16.62■□□□□ 0.25
RAB40B-211ENST00000576359 ANKRD18BA2A2Z9 1011 aa16.62■□□□□ 0.25
RAB40B-211ENST00000576359 ERVV-1B6SEH8 477 aa16.62■□□□□ 0.25
RAB40B-211ENST00000576359 MCAMP43121 646 aa16.62■□□□□ 0.25
RAB40B-211ENST00000576359 APOBRQ0VD83 1088 aa16.62■□□□□ 0.25
RAB40B-211ENST00000576359 UVSSAQ2YD98 709 aa16.62■□□□□ 0.25
RAB40B-211ENST00000576359 GIMAP6Q6P9H5 292 aa16.62■□□□□ 0.25
RAB40B-211ENST00000576359 ZKSCAN5Q9Y2L8 839 aa16.62■□□□□ 0.25
RAB40B-211ENST00000576359 PFKFB2O60825 505 aa16.61■□□□□ 0.25
RAB40B-211ENST00000576359 ZNF34Q8IZ26 560 aa16.61■□□□□ 0.25
RAB40B-211ENST00000576359 PKNOX2Q96KN3 472 aa16.61■□□□□ 0.25
RAB40B-211ENST00000576359 LRP5O75197 1615 aa16.61■□□□□ 0.25
RAB40B-211ENST00000576359 ABCC12Q96J65 1359 aa16.61■□□□□ 0.25
RAB40B-211ENST00000576359 WASHC4Q2M389 1173 aa16.61■□□□□ 0.25
RAB40B-211ENST00000576359 SMARCC2Q8TAQ2 1214 aa16.61■□□□□ 0.25
RAB40B-211ENST00000576359 DDX11Q96FC9 970 aa16.61■□□□□ 0.25
RAB40B-211ENST00000576359 PUS7LQ9H0K6 701 aaKnown RBP16.61■□□□□ 0.25
RAB40B-211ENST00000576359 SPATA31A1Q5TZJ5 1347 aa16.6■□□□□ 0.25
RAB40B-211ENST00000576359 PDE8AO60658 829 aa16.6■□□□□ 0.25
RAB40B-211ENST00000576359 ADAMTS2O95450 1211 aa16.6■□□□□ 0.25
RAB40B-211ENST00000576359 CTDNEP1O95476 244 aa16.6■□□□□ 0.25
RAB40B-211ENST00000576359 ZFYP08048 801 aaPredicted RBP16.6■□□□□ 0.25
RAB40B-211ENST00000576359 FGD1P98174 961 aa16.6■□□□□ 0.25
RAB40B-211ENST00000576359 CHST3Q7LGC8 479 aa16.6■□□□□ 0.25
RAB40B-211ENST00000576359 FUCA2Q9BTY2 467 aa16.6■□□□□ 0.25
RAB40B-211ENST00000576359 CNNM1Q9NRU3 951 aa16.6■□□□□ 0.25
RAB40B-211ENST00000576359 ZNF500O60304 480 aaPredicted RBP16.6■□□□□ 0.25
RAB40B-211ENST00000576359 INTS5Q6P9B9 1019 aaKnown RBP16.6■□□□□ 0.25
RAB40B-211ENST00000576359 NSUN7Q8NE18 718 aaKnown RBP16.6■□□□□ 0.25
RAB40B-211ENST00000576359 ELP1O95163 1332 aa16.59■□□□□ 0.25
RAB40B-211ENST00000576359 ADRA2BP18089 450 aa16.59■□□□□ 0.25
RAB40B-211ENST00000576359 EIF5P55010 431 aaKnown RBP16.59■□□□□ 0.25
RAB40B-211ENST00000576359 RESTQ13127 1097 aa16.59■□□□□ 0.25
RAB40B-211ENST00000576359 APPBP2Q92624 585 aa16.59■□□□□ 0.25
RAB40B-211ENST00000576359 USP25Q9UHP3 1055 aa16.59■□□□□ 0.25
RAB40B-211ENST00000576359 MYO5AQ9Y4I1 1855 aaKnown RBP16.59■□□□□ 0.25
RAB40B-211ENST00000576359 OFD1O75665 1012 aa16.59■□□□□ 0.25
RAB40B-211ENST00000576359 PTMAP06454 111 aaKnown RBP16.59■□□□□ 0.25
RAB40B-211ENST00000576359 ACSBG1Q96GR2 724 aa16.59■□□□□ 0.25
RAB40B-211ENST00000576359 TFIP11Q9UBB9 837 aaKnown RBP16.59■□□□□ 0.25
RAB40B-211ENST00000576359 LRRFIP1Q32MZ4 808 aaKnown RBP16.58■□□□□ 0.25
RAB40B-211ENST00000576359 PDE8BO95263 885 aa16.58■□□□□ 0.24
RAB40B-211ENST00000576359 FGAP02671 866 aa16.58■□□□□ 0.24
RAB40B-211ENST00000576359 MCM5P33992 734 aa16.58■□□□□ 0.24
RAB40B-211ENST00000576359 HAND2P61296 217 aa16.58■□□□□ 0.24
RAB40B-211ENST00000576359 DDB1Q16531 1140 aa16.58■□□□□ 0.24
RAB40B-211ENST00000576359 LLPHQ9BRT6 129 aaKnown RBP16.58■□□□□ 0.24
RAB40B-211ENST00000576359 SCAND2PQ9GZW5 306 aaPredicted RBP16.58■□□□□ 0.24
RAB40B-211ENST00000576359 NCOA5Q9HCD5 579 aaKnown RBP16.58■□□□□ 0.24
RAB40B-211ENST00000576359 CCT2P78371 535 aaKnown RBP16.57■□□□□ 0.24
RAB40B-211ENST00000576359 SUSD4Q5VX71 490 aa16.57■□□□□ 0.24
RAB40B-211ENST00000576359 KLHL34Q8N239 644 aa16.57■□□□□ 0.24
RAB40B-211ENST00000576359 MARCH10Q8NA82 808 aaPredicted RBP16.57■□□□□ 0.24
RAB40B-211ENST00000576359 GPHNQ9NQX3 736 aaPredicted RBP16.57■□□□□ 0.24
RAB40B-211ENST00000576359 RREB1Q92766 1687 aa16.57■□□□□ 0.24
RAB40B-211ENST00000576359 PTPDC1A2A3K4 754 aa16.57■□□□□ 0.24
RAB40B-211ENST00000576359 LIG1P18858 919 aa16.57■□□□□ 0.24
RAB40B-211ENST00000576359 CRKLP46109 303 aaKnown RBP16.57■□□□□ 0.24
RAB40B-211ENST00000576359 LEO1Q8WVC0 666 aaPredicted RBP16.57■□□□□ 0.24
RAB40B-211ENST00000576359 ZNF512BQ96KM6 892 aaPredicted RBP16.57■□□□□ 0.24
RAB40B-211ENST00000576359 SPATA32Q96LK8 384 aa16.57■□□□□ 0.24
RAB40B-211ENST00000576359 CCDC87Q9NVE4 849 aa16.57■□□□□ 0.24
RAB40B-211ENST00000576359 SALL1Q9NSC2 1324 aa16.56■□□□□ 0.24
RAB40B-211ENST00000576359 PHLPP1O60346 1717 aa16.56■□□□□ 0.24
RAB40B-211ENST00000576359 DDX60Q8IY21 1712 aaKnown RBP16.56■□□□□ 0.24
RAB40B-211ENST00000576359 ARAP2Q8WZ64 1704 aa16.56■□□□□ 0.24
RAB40B-211ENST00000576359 A0A0G2JS52 829 aa16.56■□□□□ 0.24
RAB40B-211ENST00000576359 GPAA1O43292 621 aa16.56■□□□□ 0.24
RAB40B-211ENST00000576359 PDIA3P30101 505 aaKnown RBP16.56■□□□□ 0.24
RAB40B-211ENST00000576359 PHKA1P46020 1223 aa16.56■□□□□ 0.24
RAB40B-211ENST00000576359 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.56■□□□□ 0.24
RAB40B-211ENST00000576359 CDCA7Q9BWT1 371 aaPredicted RBP16.56■□□□□ 0.24
RAB40B-211ENST00000576359 PIH1D3Q9NQM4 214 aaKnown RBP16.56■□□□□ 0.24
RAB40B-211ENST00000576359 ADD2P35612 726 aa16.56■□□□□ 0.24
RAB40B-211ENST00000576359 ITPK1Q13572 414 aa16.56■□□□□ 0.24
RAB40B-211ENST00000576359 HELBQ8NG08 1087 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms