RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 LEMD3Q9Y2U8 911 aa16.63■□□□□ 0.25
RPAIN-216ENST00000575599 ZNF804BA4D1E1 1349 aa16.62■□□□□ 0.25
RPAIN-216ENST00000575599 C19orf67A6NJJ6 358 aa16.62■□□□□ 0.25
RPAIN-216ENST00000575599 PSMD14O00487 310 aa16.62■□□□□ 0.25
RPAIN-216ENST00000575599 TAF5LO75529 589 aa16.62■□□□□ 0.25
RPAIN-216ENST00000575599 GMPSP49915 693 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-216ENST00000575599 FSTL1Q12841 308 aa16.62■□□□□ 0.25
RPAIN-216ENST00000575599 INTS3Q68E01 1043 aaKnown RBP16.62■□□□□ 0.25
RPAIN-216ENST00000575599 KCNQ5Q9NR82 932 aa16.62■□□□□ 0.25
RPAIN-216ENST00000575599 PLIN1O60240 522 aa16.61■□□□□ 0.25
RPAIN-216ENST00000575599 KLRK1P26718 216 aa16.61■□□□□ 0.25
RPAIN-216ENST00000575599 EPS15P42566 896 aa16.61■□□□□ 0.25
RPAIN-216ENST00000575599 LRRFIP2Q9Y608 721 aaKnown RBP16.61■□□□□ 0.25
RPAIN-216ENST00000575599 SCN9AQ15858 1988 aa16.61■□□□□ 0.25
RPAIN-216ENST00000575599 SNAP23O00161 211 aa16.6■□□□□ 0.25
RPAIN-216ENST00000575599 HSPA6P17066 643 aa16.6■□□□□ 0.25
RPAIN-216ENST00000575599 FTSJ3Q8IY81 847 aaKnown RBP16.6■□□□□ 0.25
RPAIN-216ENST00000575599 KLHDC4Q8TBB5 520 aa16.6■□□□□ 0.25
RPAIN-216ENST00000575599 PUS3Q9BZE2 481 aaKnown RBP16.6■□□□□ 0.25
RPAIN-216ENST00000575599 GPRC5DQ9NZD1 345 aa16.6■□□□□ 0.25
RPAIN-216ENST00000575599 CLEC11AQ9Y240 323 aa16.6■□□□□ 0.25
RPAIN-216ENST00000575599 CHADLQ6NUI6 762 aa16.59■□□□□ 0.25
RPAIN-216ENST00000575599 PNMA8AQ86V59 439 aaPredicted RBP16.59■□□□□ 0.25
RPAIN-216ENST00000575599 TXNRD3Q86VQ6 643 aa16.59■□□□□ 0.25
RPAIN-216ENST00000575599 LDHDQ86WU2 507 aa16.59■□□□□ 0.25
RPAIN-216ENST00000575599 TMEM57Q8N5G2 664 aa16.59■□□□□ 0.25
RPAIN-216ENST00000575599 FBXW7Q969H0 707 aa16.58■□□□□ 0.24
RPAIN-216ENST00000575599 HDAC5Q9UQL6 1122 aa16.58■□□□□ 0.24
RPAIN-216ENST00000575599 ADAMTSL1Q8N6G6 1762 aa16.57■□□□□ 0.24
RPAIN-216ENST00000575599 SHTN1A0MZ66 631 aa16.57■□□□□ 0.24
RPAIN-216ENST00000575599 GNAI3P08754 354 aa16.57■□□□□ 0.24
RPAIN-216ENST00000575599 LRRC24Q50LG9 513 aa16.57■□□□□ 0.24
RPAIN-216ENST00000575599 PODNQ7Z5L7 613 aa16.57■□□□□ 0.24
RPAIN-216ENST00000575599 MICALL2Q8IY33 904 aa16.57■□□□□ 0.24
RPAIN-216ENST00000575599 PSME4Q14997 1843 aa16.56■□□□□ 0.24
RPAIN-216ENST00000575599 METTL24Q5JXM2 366 aa16.56■□□□□ 0.24
RPAIN-216ENST00000575599 DZIP1LQ8IYY4 767 aaKnown RBP16.56■□□□□ 0.24
RPAIN-216ENST00000575599 COA1Q9GZY4 146 aa16.56■□□□□ 0.24
RPAIN-216ENST00000575599 ADARB2Q9NS39 739 aaKnown RBP16.56■□□□□ 0.24
RPAIN-216ENST00000575599 CNOT7Q9UIV1 285 aaKnown RBP16.56■□□□□ 0.24
RPAIN-216ENST00000575599 RIPOR2Q9Y4F9 1068 aa16.56■□□□□ 0.24
RPAIN-216ENST00000575599 MROH5Q6ZUA9 1318 aa16.56■□□□□ 0.24
RPAIN-216ENST00000575599 RFX5P48382 616 aaPredicted RBP16.55■□□□□ 0.24
RPAIN-216ENST00000575599 USP50Q70EL3 339 aaPredicted RBP16.55■□□□□ 0.24
RPAIN-216ENST00000575599 ITPRIPQ8IWB1 547 aa16.55■□□□□ 0.24
RPAIN-216ENST00000575599 USP17L3A6NCW0 530 aa16.54■□□□□ 0.24
RPAIN-216ENST00000575599 USP17L4A6NCW7 530 aa16.54■□□□□ 0.24
RPAIN-216ENST00000575599 H7C1D1 291 aa16.54■□□□□ 0.24
RPAIN-216ENST00000575599 VIL1P09327 827 aaKnown RBP16.54■□□□□ 0.24
RPAIN-216ENST00000575599 RLBP1P12271 317 aa16.54■□□□□ 0.24
RPAIN-216ENST00000575599 RPS12P25398 132 aaKnown RBP16.54■□□□□ 0.24
RPAIN-216ENST00000575599 APLP1P51693 650 aa16.54■□□□□ 0.24
RPAIN-216ENST00000575599 MAP1SQ66K74 1059 aaPredicted RBP16.54■□□□□ 0.24
RPAIN-216ENST00000575599 RSBN1LQ6PCB5 846 aaPredicted RBP16.54■□□□□ 0.24
RPAIN-216ENST00000575599 USP17L1Q7RTZ2 530 aa16.54■□□□□ 0.24
RPAIN-216ENST00000575599 SIL1Q9H173 461 aa16.54■□□□□ 0.24
RPAIN-216ENST00000575599 RCAN3Q9UKA8 241 aa16.54■□□□□ 0.24
RPAIN-216ENST00000575599 IRS2Q9Y4H2 1338 aa16.53■□□□□ 0.24
RPAIN-216ENST00000575599 PTPN12Q05209 780 aaKnown RBP16.53■□□□□ 0.24
RPAIN-216ENST00000575599 ZNF804AQ7Z570 1209 aa16.53■□□□□ 0.24
RPAIN-216ENST00000575599 TRPM4Q8TD43 1214 aa16.53■□□□□ 0.24
RPAIN-216ENST00000575599 DPF2Q92785 391 aa16.53■□□□□ 0.24
RPAIN-216ENST00000575599 EYA2O00167 538 aa16.52■□□□□ 0.24
RPAIN-216ENST00000575599 GNAI2P04899 355 aa16.52■□□□□ 0.24
RPAIN-216ENST00000575599 HTRA3P83110 453 aa16.52■□□□□ 0.24
RPAIN-216ENST00000575599 UBE4AQ14139 1066 aa16.52■□□□□ 0.24
RPAIN-216ENST00000575599 C15orf52Q6ZUT6 534 aaKnown RBP16.52■□□□□ 0.24
RPAIN-216ENST00000575599 SAMD7Q7Z3H4 446 aa16.52■□□□□ 0.24
RPAIN-216ENST00000575599 MXD3Q9BW11 206 aa16.52■□□□□ 0.24
RPAIN-216ENST00000575599 CD209Q9NNX6 404 aa16.52■□□□□ 0.24
RPAIN-216ENST00000575599 ZNF646O15015 1829 aaPredicted RBP16.52■□□□□ 0.24
RPAIN-216ENST00000575599 SRGAP3O43295 1099 aa16.51■□□□□ 0.23
RPAIN-216ENST00000575599 TBC1D10BQ4KMP7 808 aaPredicted RBP16.51■□□□□ 0.23
RPAIN-216ENST00000575599 RBM26Q5T8P6 1007 aaKnown RBP16.51■□□□□ 0.23
RPAIN-216ENST00000575599 CNTROBQ8N137 903 aa16.51■□□□□ 0.23
RPAIN-216ENST00000575599 AGBL3Q8NEM8 1001 aa16.51■□□□□ 0.23
RPAIN-216ENST00000575599 PANK1Q8TE04 598 aa16.51■□□□□ 0.23
RPAIN-216ENST00000575599 PA2G4Q9UQ80 394 aaKnown RBP16.51■□□□□ 0.23
RPAIN-216ENST00000575599 PDE8BO95263 885 aa16.51■□□□□ 0.23
RPAIN-216ENST00000575599 GYG1P46976 350 aa16.51■□□□□ 0.23
RPAIN-216ENST00000575599 GTF2IP78347 998 aa16.51■□□□□ 0.23
RPAIN-216ENST00000575599 DACT2Q5SW24 774 aa16.51■□□□□ 0.23
RPAIN-216ENST00000575599 STRIP1Q5VSL9 837 aa16.51■□□□□ 0.23
RPAIN-216ENST00000575599 TTLL5Q6EMB2 1281 aa16.51■□□□□ 0.23
RPAIN-216ENST00000575599 VGLL2Q8N8G2 317 aa16.51■□□□□ 0.23
RPAIN-216ENST00000575599 C1orf115Q9H7X2 142 aa16.51■□□□□ 0.23
RPAIN-216ENST00000575599 ZNF609O15014 1411 aa16.5■□□□□ 0.23
RPAIN-216ENST00000575599 EGFRP00533 1210 aa16.5■□□□□ 0.23
RPAIN-216ENST00000575599 HIRAP54198 1017 aaPredicted RBP16.5■□□□□ 0.23
RPAIN-216ENST00000575599 KIF4BQ2VIQ3 1234 aa16.5■□□□□ 0.23
RPAIN-216ENST00000575599 ATG9AQ7Z3C6 839 aa16.5■□□□□ 0.23
RPAIN-216ENST00000575599 JAG2Q9Y219 1238 aa16.5■□□□□ 0.23
RPAIN-216ENST00000575599 PASKQ96RG2 1323 aa16.49■□□□□ 0.23
RPAIN-216ENST00000575599 CIAO1O76071 339 aa16.49■□□□□ 0.23
RPAIN-216ENST00000575599 ITGBL1O95965 494 aaPredicted RBP16.49■□□□□ 0.23
RPAIN-216ENST00000575599 USP17L8P0C7I0 530 aa16.49■□□□□ 0.23
RPAIN-216ENST00000575599 MTX1Q13505 466 aa16.49■□□□□ 0.23
RPAIN-216ENST00000575599 PUM3Q15397 648 aaKnown RBP16.49■□□□□ 0.23
RPAIN-216ENST00000575599 VPS37DQ86XT2 251 aa16.49■□□□□ 0.23
RPAIN-216ENST00000575599 GMLQ99445 158 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms