RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 ZNF280AP59817 542 aaPredicted RBP15.11■□□□□ 0.01
USP43-206ENST00000575346 USP17L1Q7RTZ2 530 aa15.11■□□□□ 0.01
USP43-206ENST00000575346 SAMD7Q7Z3H4 446 aa15.11■□□□□ 0.01
USP43-206ENST00000575346 TXNRD3Q86VQ6 643 aa15.11■□□□□ 0.01
USP43-206ENST00000575346 CHMP3Q9Y3E7 222 aa15.11■□□□□ 0.01
USP43-206ENST00000575346 CDC37L1Q7L3B6 337 aa15.1■□□□□ 0.01
USP43-206ENST00000575346 USP44Q9H0E7 712 aa15.1■□□□□ 0.01
USP43-206ENST00000575346 TRAF5O00463 557 aa15.09■□□□□ 0.01
USP43-206ENST00000575346 EGFRP00533 1210 aa15.09■□□□□ 0.01
USP43-206ENST00000575346 MMP14P50281 582 aa15.09■□□□□ 0.01
USP43-206ENST00000575346 RARSP54136 660 aaKnown RBP15.09■□□□□ 0.01
USP43-206ENST00000575346 FMR1Q06787 632 aaKnown RBP eCLIP15.09■□□□□ 0.01
USP43-206ENST00000575346 DACT2Q5SW24 774 aa15.09■□□□□ 0.01
USP43-206ENST00000575346 STRIP1Q5VSL9 837 aa15.09■□□□□ 0.01
USP43-206ENST00000575346 CST9Q5W186 159 aa15.09■□□□□ 0.01
USP43-206ENST00000575346 LDHAL6AQ6ZMR3 332 aa15.09■□□□□ 0.01
USP43-206ENST00000575346 ZNF594Q96JF6 807 aaPredicted RBP15.09■□□□□ 0.01
USP43-206ENST00000575346 MYO3BQ8WXR4 1341 aa15.09■□□□□ 0.01
USP43-206ENST00000575346 TAF5LO75529 589 aa15.08■□□□□ 0
USP43-206ENST00000575346 KLRK1P26718 216 aa15.08■□□□□ 0
USP43-206ENST00000575346 KCNJ4P48050 445 aa15.08■□□□□ 0
USP43-206ENST00000575346 KIF4BQ2VIQ3 1234 aa15.08■□□□□ 0
USP43-206ENST00000575346 DEFB115Q30KQ5 88 aa15.08■□□□□ 0
USP43-206ENST00000575346 TBC1D10BQ4KMP7 808 aaPredicted RBP15.08■□□□□ 0
USP43-206ENST00000575346 TAF7LQ5H9L4 462 aa15.08■□□□□ 0
USP43-206ENST00000575346 ANKRD44Q8N8A2 993 aa15.08■□□□□ 0
USP43-206ENST00000575346 ARHGAP45Q92619 1136 aa15.08■□□□□ 0
USP43-206ENST00000575346 GLIS2Q9BZE0 524 aaPredicted RBP15.08■□□□□ 0
USP43-206ENST00000575346 API5Q9BZZ5 524 aaKnown RBP15.08■□□□□ 0
USP43-206ENST00000575346 BICC1Q9H694 974 aaKnown RBP15.08■□□□□ 0
USP43-206ENST00000575346 CD209Q9NNX6 404 aa15.08■□□□□ 0
USP43-206ENST00000575346 NOB1Q9ULX3 412 aaKnown RBP15.08■□□□□ 0
USP43-206ENST00000575346 FOXN1O15353 648 aa15.07■□□□□ 0
USP43-206ENST00000575346 USP17L8P0C7I0 530 aa15.07■□□□□ 0
USP43-206ENST00000575346 CNNM1Q9NRU3 951 aa15.07■□□□□ 0
USP43-206ENST00000575346 RIPOR2Q9Y4F9 1068 aa15.07■□□□□ 0
USP43-206ENST00000575346 TLL2Q9Y6L7 1015 aa15.07■□□□□ 0
USP43-206ENST00000575346 SNAP23O00161 211 aa15.06■□□□□ 0
USP43-206ENST00000575346 IL1R1P14778 569 aa15.06■□□□□ 0
USP43-206ENST00000575346 VEGFBP49765 207 aa15.06■□□□□ 0
USP43-206ENST00000575346 UBE4AQ14139 1066 aa15.06■□□□□ 0
USP43-206ENST00000575346 TTLL5Q6EMB2 1281 aa15.06■□□□□ 0
USP43-206ENST00000575346 HELBQ8NG08 1087 aaPredicted RBP15.06■□□□□ 0
USP43-206ENST00000575346 HHIPL1Q96JK4 782 aa15.06■□□□□ 0
USP43-206ENST00000575346 POLR2AP24928 1970 aaKnown RBP15.05■□□□□ 0
USP43-206ENST00000575346 RBM26Q5T8P6 1007 aaKnown RBP15.05■□□□□ -0
USP43-206ENST00000575346 DCPSQ96C86 337 aaKnown RBP15.05■□□□□ -0
USP43-206ENST00000575346 PUS3Q9BZE2 481 aaKnown RBP15.05■□□□□ -0
USP43-206ENST00000575346 MYOZ2Q9NPC6 264 aa15.05■□□□□ -0
USP43-206ENST00000575346 ABT1Q9ULW3 272 aaKnown RBP15.05■□□□□ -0
USP43-206ENST00000575346 MROH5Q6ZUA9 1318 aa15.05■□□□□ -0
USP43-206ENST00000575346 KIF16BQ96L93 1317 aa15.05■□□□□ -0
USP43-206ENST00000575346 THSD7BQ9C0I4 1608 aa15.04■□□□□ -0
USP43-206ENST00000575346 PITPNM2Q9BZ72 1349 aa15.04■□□□□ -0
USP43-206ENST00000575346 CELF2O95319 508 aaKnown RBP15.04■□□□□ -0
USP43-206ENST00000575346 FKBP1AP62942 108 aaKnown RBP15.04■□□□□ -0
USP43-206ENST00000575346 KRT26Q7Z3Y9 468 aa15.04■□□□□ -0
USP43-206ENST00000575346 ZNF804AQ7Z570 1209 aa15.04■□□□□ -0
USP43-206ENST00000575346 SAPCD2Q86UD0 394 aa15.04■□□□□ -0
USP43-206ENST00000575346 USP48Q86UV5 1035 aa15.04■□□□□ -0
USP43-206ENST00000575346 WDR33Q9C0J8 1336 aaKnown RBP15.03■□□□□ -0
USP43-206ENST00000575346 GTF2IP78347 998 aa15.03■□□□□ -0
USP43-206ENST00000575346 SCARF1Q14162 830 aa15.03■□□□□ -0
USP43-206ENST00000575346 INTS3Q68E01 1043 aaKnown RBP15.03■□□□□ -0
USP43-206ENST00000575346 OGFOD1Q8N543 542 aa15.03■□□□□ -0
USP43-206ENST00000575346 MXD3Q9BW11 206 aa15.03■□□□□ -0
USP43-206ENST00000575346 PRDM10Q9NQV6 1147 aa15.03■□□□□ -0
USP43-206ENST00000575346 GGA3Q9NZ52 723 aa15.03■□□□□ -0
USP43-206ENST00000575346 PLIN1O60240 522 aa15.02■□□□□ -0
USP43-206ENST00000575346 ECE1P42892 770 aa15.02■□□□□ -0
USP43-206ENST00000575346 RFX5P48382 616 aaPredicted RBP15.02■□□□□ -0
USP43-206ENST00000575346 HNRNPUQ00839 825 aaKnown RBP eCLIP15.02■□□□□ -0
USP43-206ENST00000575346 VGLL2Q8N8G2 317 aa15.02■□□□□ -0
USP43-206ENST00000575346 WBP1LQ9NX94 342 aa15.02■□□□□ -0
USP43-206ENST00000575346 HDAC5Q9UQL6 1122 aa15.02■□□□□ -0
USP43-206ENST00000575346 ASTN2O75129 1339 aaPredicted RBP15.01□□□□□ -0.01
USP43-206ENST00000575346 UBTFL1P0CB47 393 aaPredicted RBP15.01□□□□□ -0.01
USP43-206ENST00000575346 CTCFP49711 727 aaPredicted RBP15.01□□□□□ -0.01
USP43-206ENST00000575346 LRRC24Q50LG9 513 aa15.01□□□□□ -0.01
USP43-206ENST00000575346 ANGEL2Q5VTE6 544 aaKnown RBP15.01□□□□□ -0.01
USP43-206ENST00000575346 SULF1Q8IWU6 871 aa15.01□□□□□ -0.01
USP43-206ENST00000575346 TDRD7Q8NHU6 1098 aaKnown RBP15.01□□□□□ -0.01
USP43-206ENST00000575346 ZBED3Q96IU2 234 aaPredicted RBP15.01□□□□□ -0.01
USP43-206ENST00000575346 FBXO3Q9UK99 471 aa15.01□□□□□ -0.01
USP43-206ENST00000575346 HDAC9Q9UKV0 1011 aa15.01□□□□□ -0.01
USP43-206ENST00000575346 FAM205AQ6ZU69 1335 aa15□□□□□ -0.01
USP43-206ENST00000575346 ADM5C9JUS6 153 aa15□□□□□ -0.01
USP43-206ENST00000575346 WNT10BO00744 389 aa15□□□□□ -0.01
USP43-206ENST00000575346 IPO8O15397 1037 aaKnown RBP15□□□□□ -0.01
USP43-206ENST00000575346 SASH1O94885 1247 aa15□□□□□ -0.01
USP43-206ENST00000575346 PDE8BO95263 885 aa15□□□□□ -0.01
USP43-206ENST00000575346 PTPN12Q05209 780 aaKnown RBP15□□□□□ -0.01
USP43-206ENST00000575346 CERS5Q8N5B7 392 aa15□□□□□ -0.01
USP43-206ENST00000575346 FBXW7Q969H0 707 aa15□□□□□ -0.01
USP43-206ENST00000575346 AIDAQ96BJ3 306 aa15□□□□□ -0.01
USP43-206ENST00000575346 FAM84BQ96KN1 310 aaPredicted RBP15□□□□□ -0.01
USP43-206ENST00000575346 CAPNS2Q96L46 248 aa15□□□□□ -0.01
USP43-206ENST00000575346 ZBED9Q6R2W3 1325 aa14.99□□□□□ -0.01
USP43-206ENST00000575346 HIBADHP31937 336 aaKnown RBP14.99□□□□□ -0.01
USP43-206ENST00000575346 LBX1P52954 281 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms