RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 CAVIN2O95810 425 aa17.4■□□□□ 0.38
ABR-228ENST00000574437 RAPGEF4Q8WZA2 1011 aa17.4■□□□□ 0.38
ABR-228ENST00000574437 ZNF496Q96IT1 587 aaPredicted RBP17.4■□□□□ 0.38
ABR-228ENST00000574437 SF3A1Q15459 793 aaKnown RBP17.39■□□□□ 0.37
ABR-228ENST00000574437 ZNF396Q96N95 335 aaPredicted RBP17.39■□□□□ 0.37
ABR-228ENST00000574437 GTPBP4Q9BZE4 634 aaKnown RBP17.39■□□□□ 0.37
ABR-228ENST00000574437 DCCP43146 1447 aa17.39■□□□□ 0.37
ABR-228ENST00000574437 CTAGE5O15320 804 aa17.39■□□□□ 0.37
ABR-228ENST00000574437 OTUD7BQ6GQQ9 843 aa17.39■□□□□ 0.37
ABR-228ENST00000574437 STRN4Q9NRL3 753 aa17.39■□□□□ 0.37
ABR-228ENST00000574437 ANO10Q9NW15 660 aa17.39■□□□□ 0.37
ABR-228ENST00000574437 PFKFB2O60825 505 aa17.38■□□□□ 0.37
ABR-228ENST00000574437 LMBR1LQ6UX01 489 aa17.38■□□□□ 0.37
ABR-228ENST00000574437 CEP57L1Q8IYX8 460 aa17.38■□□□□ 0.37
ABR-228ENST00000574437 RCOR1Q9UKL0 485 aa17.38■□□□□ 0.37
ABR-228ENST00000574437 A0A1B0GVL5 298 aa17.38■□□□□ 0.37
ABR-228ENST00000574437 CTDNEP1O95476 244 aa17.38■□□□□ 0.37
ABR-228ENST00000574437 ADD1P35611 737 aaKnown RBP17.38■□□□□ 0.37
ABR-228ENST00000574437 TIMM10P62072 90 aa17.38■□□□□ 0.37
ABR-228ENST00000574437 TTC5Q8N0Z6 440 aa17.38■□□□□ 0.37
ABR-228ENST00000574437 TNS3Q68CZ2 1445 aa17.38■□□□□ 0.37
ABR-228ENST00000574437 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
ABR-228ENST00000574437 SLIT3O75094 1523 aa17.38■□□□□ 0.37
ABR-228ENST00000574437 ZNF771Q7L3S4 317 aaPredicted RBP17.38■□□□□ 0.37
ABR-228ENST00000574437 RAB11FIP4Q86YS3 637 aa17.38■□□□□ 0.37
ABR-228ENST00000574437 HAUS7Q99871 368 aa17.38■□□□□ 0.37
ABR-228ENST00000574437 XIRP1Q702N8 1843 aaKnown RBP17.37■□□□□ 0.37
ABR-228ENST00000574437 KBTBD3Q8NAB2 608 aa17.37■□□□□ 0.37
ABR-228ENST00000574437 SMARCC2Q8TAQ2 1214 aa17.37■□□□□ 0.37
ABR-228ENST00000574437 SYTL4Q96C24 671 aaPredicted RBP17.37■□□□□ 0.37
ABR-228ENST00000574437 MRFAP1L1Q96HT8 127 aa17.37■□□□□ 0.37
ABR-228ENST00000574437 ZNF215Q9UL58 517 aaPredicted RBP17.37■□□□□ 0.37
ABR-228ENST00000574437 HEG1Q9ULI3 1381 aa17.37■□□□□ 0.37
ABR-228ENST00000574437 BIN1O00499 593 aa17.37■□□□□ 0.37
ABR-228ENST00000574437 POLR3DP05423 398 aaPredicted RBP17.37■□□□□ 0.37
ABR-228ENST00000574437 FAM160A1Q05DH4 1040 aa17.37■□□□□ 0.37
ABR-228ENST00000574437 FEZ1Q99689 392 aa17.37■□□□□ 0.37
ABR-228ENST00000574437 CGNQ9P2M7 1197 aaKnown RBP17.37■□□□□ 0.37
ABR-228ENST00000574437 SMC2O95347 1197 aa17.36■□□□□ 0.37
ABR-228ENST00000574437 CDC25BP30305 580 aa17.36■□□□□ 0.37
ABR-228ENST00000574437 RFX5P48382 616 aaPredicted RBP17.36■□□□□ 0.37
ABR-228ENST00000574437 SNW1Q13573 536 aaKnown RBP17.36■□□□□ 0.37
ABR-228ENST00000574437 NAA16Q6N069 864 aaPredicted RBP17.36■□□□□ 0.37
ABR-228ENST00000574437 LLPHQ9BRT6 129 aaKnown RBP17.36■□□□□ 0.37
ABR-228ENST00000574437 OGFRQ9NZT2 677 aa17.36■□□□□ 0.37
ABR-228ENST00000574437 HMGB1P09429 215 aaKnown RBP17.36■□□□□ 0.37
ABR-228ENST00000574437 CTNNA3Q9UI47 895 aa17.36■□□□□ 0.37
ABR-228ENST00000574437 SARM1Q6SZW1 724 aa17.36■□□□□ 0.37
ABR-228ENST00000574437 DHX40Q8IX18 779 aaKnown RBP17.36■□□□□ 0.37
ABR-228ENST00000574437 PAG1Q9NWQ8 432 aa17.36■□□□□ 0.37
ABR-228ENST00000574437 JCADQ9P266 1359 aa17.35■□□□□ 0.37
ABR-228ENST00000574437 TTLL5Q6EMB2 1281 aa17.35■□□□□ 0.37
ABR-228ENST00000574437 SLC52A2Q9HAB3 445 aa17.35■□□□□ 0.37
ABR-228ENST00000574437 GPHNQ9NQX3 736 aaPredicted RBP17.35■□□□□ 0.37
ABR-228ENST00000574437 E7EWF7 191 aa17.35■□□□□ 0.37
ABR-228ENST00000574437 NEMFO60524 1076 aa17.35■□□□□ 0.37
ABR-228ENST00000574437 HAND2P61296 217 aa17.35■□□□□ 0.37
ABR-228ENST00000574437 STK38Q15208 465 aa17.35■□□□□ 0.37
ABR-228ENST00000574437 NAT10Q9H0A0 1025 aaKnown RBP17.35■□□□□ 0.37
ABR-228ENST00000574437 USP54Q70EL1 1684 aa17.35■□□□□ 0.37
ABR-228ENST00000574437 ISM2Q6H9L7 571 aa17.34■□□□□ 0.37
ABR-228ENST00000574437 TOM1L2Q6ZVM7 507 aa17.34■□□□□ 0.37
ABR-228ENST00000574437 PCDHA7Q9UN72 937 aa17.34■□□□□ 0.37
ABR-228ENST00000574437 NCAPD2Q15021 1401 aa17.34■□□□□ 0.37
ABR-228ENST00000574437 SOS2Q07890 1332 aaPredicted RBP17.34■□□□□ 0.37
ABR-228ENST00000574437 MRPS27Q92552 414 aaKnown RBP17.34■□□□□ 0.37
ABR-228ENST00000574437 KIF1AQ12756 1690 aa17.33■□□□□ 0.37
ABR-228ENST00000574437 TATP17735 454 aaPredicted RBP17.33■□□□□ 0.37
ABR-228ENST00000574437 PDIA3P30101 505 aaKnown RBP17.33■□□□□ 0.37
ABR-228ENST00000574437 ALS2Q96Q42 1657 aa17.33■□□□□ 0.36
ABR-228ENST00000574437 CCZ1BP86790 482 aa17.33■□□□□ 0.36
ABR-228ENST00000574437 CCZ1P86791 482 aaPredicted RBP17.33■□□□□ 0.36
ABR-228ENST00000574437 FKBP4Q02790 459 aaKnown RBP eCLIP17.33■□□□□ 0.36
ABR-228ENST00000574437 KIF18AQ8NI77 898 aa17.33■□□□□ 0.36
ABR-228ENST00000574437 SNRPA1P09661 255 aaKnown RBP17.32■□□□□ 0.36
ABR-228ENST00000574437 HSPD1P10809 573 aaKnown RBP17.32■□□□□ 0.36
ABR-228ENST00000574437 ELF2Q15723 593 aa17.32■□□□□ 0.36
ABR-228ENST00000574437 TMC6Q7Z403 805 aa17.32■□□□□ 0.36
ABR-228ENST00000574437 ENGASEQ8NFI3 743 aa17.32■□□□□ 0.36
ABR-228ENST00000574437 IFIT1P09914 478 aaKnown RBP17.32■□□□□ 0.36
ABR-228ENST00000574437 NDUFA8P51970 172 aa17.32■□□□□ 0.36
ABR-228ENST00000574437 CCAR2Q8N163 923 aaKnown RBP17.32■□□□□ 0.36
ABR-228ENST00000574437 ZNF594Q96JF6 807 aaPredicted RBP17.32■□□□□ 0.36
ABR-228ENST00000574437 GJB4Q9NTQ9 266 aa17.32■□□□□ 0.36
ABR-228ENST00000574437 RBM6P78332 1123 aaKnown RBP17.32■□□□□ 0.36
ABR-228ENST00000574437 SYCP1Q15431 976 aa17.32■□□□□ 0.36
ABR-228ENST00000574437 WASHC4Q2M389 1173 aa17.32■□□□□ 0.36
ABR-228ENST00000574437 DPCR1Q3MIW9 517 aa17.32■□□□□ 0.36
ABR-228ENST00000574437 IFNKQ9P0W0 207 aa17.32■□□□□ 0.36
ABR-228ENST00000574437 CYP27B1O15528 508 aa17.31■□□□□ 0.36
ABR-228ENST00000574437 CLIC4Q9Y696 253 aa17.31■□□□□ 0.36
ABR-228ENST00000574437 HSP90AB3PQ58FF7 597 aa17.31■□□□□ 0.36
ABR-228ENST00000574437 ILDR1Q86SU0 546 aaPredicted RBP17.31■□□□□ 0.36
ABR-228ENST00000574437 LMO7Q8WWI1 1683 aa17.3■□□□□ 0.36
ABR-228ENST00000574437 EXOSC10Q01780 885 aaKnown RBP17.3■□□□□ 0.36
ABR-228ENST00000574437 C8orf76Q96K31 380 aa17.3■□□□□ 0.36
ABR-228ENST00000574437 SH3TC1Q8TE82 1336 aa17.3■□□□□ 0.36
ABR-228ENST00000574437 GORABQ5T7V8 394 aa17.3■□□□□ 0.36
ABR-228ENST00000574437 XPO4Q9C0E2 1151 aaKnown RBP17.3■□□□□ 0.36
ABR-228ENST00000574437 HELLSQ9NRZ9 838 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms