RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 GARTP22102 1010 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 GRNP28799 593 aaKnown RBP2.89□□□□□ -1.95
CHD3-217ENST00000574022 SLC19A1P41440 591 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 VEGFBP49765 207 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 LIG3P49916 1009 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 AMPD3Q01432 767 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 LMNB2Q03252 620 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 POU4F2Q12837 409 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 GRIN2CQ14957 1233 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 PLEKHG6Q3KR16 790 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 SEZ6Q53EL9 994 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 PEAR1Q5VY43 1037 aaPredicted RBP2.89□□□□□ -1.95
CHD3-217ENST00000574022 FBXW10Q5XX13 1052 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 CCDC81Q6ZN84 652 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 FAM196AQ6ZSG2 479 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 C16orf86Q6ZW13 317 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 SLITRK4Q8IW52 837 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 CELF2-AS1Q8N7Q2 184 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 INSM2Q96T92 566 aaPredicted RBP2.89□□□□□ -1.95
CHD3-217ENST00000574022 PSMD1Q99460 953 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 IRF2BPLQ9H1B7 796 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 LIN7BQ9HAP6 207 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 POLMQ9NP87 494 aaPredicted RBP2.89□□□□□ -1.95
CHD3-217ENST00000574022 ST7Q9NRC1 585 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 SLC52A1Q9NWF4 448 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 KANSL3Q9P2N6 904 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 SALL4Q9UJQ4 1053 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 PPT2Q9UMR5 302 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 G3BP2Q9UN86 482 aaKnown RBP2.89□□□□□ -1.95
CHD3-217ENST00000574022 MSRB2Q9Y3D2 182 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 PLEKHD1A6NEE1 506 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 SASH3O75995 380 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 S100BP04271 92 aaPredicted RBP2.88□□□□□ -1.95
CHD3-217ENST00000574022 CYP2E1P05181 493 aaPredicted RBP2.88□□□□□ -1.95
CHD3-217ENST00000574022 CELA3AP09093 270 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 TIMP2P16035 220 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 TFE3P19532 575 aaPredicted RBP2.88□□□□□ -1.95
CHD3-217ENST00000574022 ATP4AP20648 1035 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 LMNB1P20700 586 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 MSX1P28360 303 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 MCM4P33991 863 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 CRKP46108 304 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 GIPRP48546 466 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 MASP1P48740 699 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 ZNF165P49910 485 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 TYRO3Q06418 890 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 FOXC1Q12948 553 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 RASGRF1Q13972 1273 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 FXNQ16595 210 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 DDR2Q16832 855 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 WDR44Q5JSH3 913 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 DIEXFQ68CQ4 756 aaKnown RBP2.88□□□□□ -1.95
CHD3-217ENST00000574022 TTBK2Q6IQ55 1244 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 AGMOQ6ZNB7 445 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 KIAA0907Q7Z7F0 614 aaPredicted RBP2.88□□□□□ -1.95
CHD3-217ENST00000574022 FAM169BQ8N8A8 192 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 OR13H1Q8NG92 308 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 SNIP1Q8TAD8 396 aaKnown RBP2.88□□□□□ -1.95
CHD3-217ENST00000574022 STAG1Q8WVM7 1258 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 EMID1Q96A84 441 aaPredicted RBP2.88□□□□□ -1.95
CHD3-217ENST00000574022 FERD3LQ96RJ6 166 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 TCF12Q99081 682 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 TSEN34Q9BSV6 310 aaKnown RBP2.88□□□□□ -1.95
CHD3-217ENST00000574022 KRTAP3-3Q9BYR6 98 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 KRTAP3-2Q9BYR7 98 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 ABCB6Q9NP58 842 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 TIMMDC1Q9NPL8 285 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 TMEM260Q9NX78 707 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 ACTR10Q9NZ32 417 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 FAN1Q9Y2M0 1017 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 RIPOR2Q9Y4F9 1068 aa2.88□□□□□ -1.95
CHD3-217ENST00000574022 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.88□□□□□ -1.95
CHD3-217ENST00000574022 LOC102724159A0A0B4J2E5 919 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 A0A1B0GTH6 734 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 TLR3O15455 904 aaKnown RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 SPINT1O43278 529 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 TPD52L2O43399 206 aaKnown RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 MMP20O60882 483 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 TRIM37O94972 964 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 UPP2O95045 317 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 MAP4K4O95819 1239 aaPredicted RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 F13A1P00488 732 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 PDGFRBP09619 1106 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 TARSP26639 723 aaKnown RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 CTSOP43234 321 aaPredicted RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 RPS26P62854 115 aaKnown RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 SQSTM1Q13501 440 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 SEPT6Q14141 434 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 PWP2Q15269 919 aaKnown RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 CWF19L2Q2TBE0 894 aaKnown RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 MTERF2Q49AM1 385 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 LARP1BQ659C4 914 aaKnown RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 LYSMD3Q7Z3D4 306 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 PRICKLE2Q7Z3G6 844 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 KRT25Q7Z3Z0 450 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 CCDC84Q86UT8 332 aaPredicted RBP2.87□□□□□ -1.95
CHD3-217ENST00000574022 FERMT3Q86UX7 667 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 NCAPG2Q86XI2 1143 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 CCNJLQ8IV13 435 aa2.87□□□□□ -1.95
CHD3-217ENST00000574022 TRIM42Q8IWZ5 723 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms