RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 USP50Q70EL3 339 aaPredicted RBP34.78■■■■□ 3.16
SCARF1-207ENST00000573867 DPF2Q92785 391 aa34.78■■■■□ 3.16
SCARF1-207ENST00000573867 COA1Q9GZY4 146 aa34.78■■■■□ 3.16
SCARF1-207ENST00000573867 CLEC11AQ9Y240 323 aa34.78■■■■□ 3.16
SCARF1-207ENST00000573867 RLBP1P12271 317 aa34.77■■■■□ 3.16
SCARF1-207ENST00000573867 HTRA3P83110 453 aa34.77■■■■□ 3.16
SCARF1-207ENST00000573867 C15orf52Q6ZUT6 534 aaKnown RBP34.77■■■■□ 3.16
SCARF1-207ENST00000573867 MICALL2Q8IY33 904 aa34.77■■■■□ 3.16
SCARF1-207ENST00000573867 TRPM4Q8TD43 1214 aa34.77■■■■□ 3.16
SCARF1-207ENST00000573867 APLP1P51693 650 aa34.76■■■■□ 3.16
SCARF1-207ENST00000573867 PTPN12Q05209 780 aaKnown RBP34.76■■■■□ 3.16
SCARF1-207ENST00000573867 MAP1SQ66K74 1059 aaPredicted RBP34.76■■■■□ 3.16
SCARF1-207ENST00000573867 ZNF609O15014 1411 aa34.75■■■■□ 3.15
SCARF1-207ENST00000573867 RPS12P25398 132 aaKnown RBP34.75■■■■□ 3.15
SCARF1-207ENST00000573867 HIRAP54198 1017 aaPredicted RBP34.75■■■■□ 3.15
SCARF1-207ENST00000573867 RSBN1LQ6PCB5 846 aaPredicted RBP34.75■■■■□ 3.15
SCARF1-207ENST00000573867 USP17L3A6NCW0 530 aa34.74■■■■□ 3.15
SCARF1-207ENST00000573867 USP17L4A6NCW7 530 aa34.74■■■■□ 3.15
SCARF1-207ENST00000573867 ITGBL1O95965 494 aaPredicted RBP34.74■■■■□ 3.15
SCARF1-207ENST00000573867 GNAI3P08754 354 aa34.74■■■■□ 3.15
SCARF1-207ENST00000573867 USP17L1Q7RTZ2 530 aa34.74■■■■□ 3.15
SCARF1-207ENST00000573867 EGFRP00533 1210 aa34.73■■■■□ 3.15
SCARF1-207ENST00000573867 VGLL2Q8N8G2 317 aa34.73■■■■□ 3.15
SCARF1-207ENST00000573867 GMLQ99445 158 aa34.73■■■■□ 3.15
SCARF1-207ENST00000573867 MXD3Q9BW11 206 aa34.73■■■■□ 3.15
SCARF1-207ENST00000573867 MROH5Q6ZUA9 1318 aa34.73■■■■□ 3.15
SCARF1-207ENST00000573867 DACT2Q5SW24 774 aa34.72■■■■□ 3.15
SCARF1-207ENST00000573867 CD209Q9NNX6 404 aa34.72■■■■□ 3.15
SCARF1-207ENST00000573867 PASKQ96RG2 1323 aa34.72■■■■□ 3.15
SCARF1-207ENST00000573867 SAMD7Q7Z3H4 446 aa34.71■■■■□ 3.15
SCARF1-207ENST00000573867 H7C1D1 291 aa34.7■■■■□ 3.15
SCARF1-207ENST00000573867 UBE4AQ14139 1066 aa34.7■■■■□ 3.15
SCARF1-207ENST00000573867 METTL24Q5JXM2 366 aa34.7■■■■□ 3.15
SCARF1-207ENST00000573867 DZIP1LQ8IYY4 767 aaKnown RBP34.7■■■■□ 3.15
SCARF1-207ENST00000573867 CNTROBQ8N137 903 aa34.7■■■■□ 3.15
SCARF1-207ENST00000573867 EYA2O00167 538 aa34.69■■■■□ 3.14
SCARF1-207ENST00000573867 ATG9AQ7Z3C6 839 aa34.69■■■■□ 3.14
SCARF1-207ENST00000573867 HDAC5Q9UQL6 1122 aa34.69■■■■□ 3.14
SCARF1-207ENST00000573867 TBC1D10BQ4KMP7 808 aaPredicted RBP34.68■■■■□ 3.14
SCARF1-207ENST00000573867 AGBL3Q8NEM8 1001 aa34.68■■■■□ 3.14
SCARF1-207ENST00000573867 PA2G4Q9UQ80 394 aaKnown RBP34.68■■■■□ 3.14
SCARF1-207ENST00000573867 STRIP1Q5VSL9 837 aa34.67■■■■□ 3.14
SCARF1-207ENST00000573867 FTSJ3Q8IY81 847 aaKnown RBP34.67■■■■□ 3.14
SCARF1-207ENST00000573867 FBXW7Q969H0 707 aa34.67■■■■□ 3.14
SCARF1-207ENST00000573867 PDE8BO95263 885 aa34.66■■■■□ 3.14
SCARF1-207ENST00000573867 SIL1Q9H173 461 aa34.66■■■■□ 3.14
SCARF1-207ENST00000573867 PGAP2Q9UHJ9 254 aa34.66■■■■□ 3.14
SCARF1-207ENST00000573867 IL1R1P14778 569 aa34.65■■■■□ 3.14
SCARF1-207ENST00000573867 GYG1P46976 350 aa34.65■■■■□ 3.14
SCARF1-207ENST00000573867 ZNF280AP59817 542 aaPredicted RBP34.65■■■■□ 3.14
SCARF1-207ENST00000573867 GTF2IP78347 998 aa34.65■■■■□ 3.14
SCARF1-207ENST00000573867 FMR1Q06787 632 aaKnown RBP eCLIP34.65■■■■□ 3.14
SCARF1-207ENST00000573867 MTX1Q13505 466 aa34.65■■■■□ 3.14
SCARF1-207ENST00000573867 ZNF804AQ7Z570 1209 aa34.65■■■■□ 3.14
SCARF1-207ENST00000573867 DNAJC5GQ8N7S2 189 aa34.65■■■■□ 3.14
SCARF1-207ENST00000573867 RCAN3Q9UKA8 241 aa34.65■■■■□ 3.14
SCARF1-207ENST00000573867 GNAI2P04899 355 aa34.64■■■■□ 3.14
SCARF1-207ENST00000573867 RBM26Q5T8P6 1007 aaKnown RBP34.64■■■■□ 3.14
SCARF1-207ENST00000573867 TTLL5Q6EMB2 1281 aa34.64■■■■□ 3.14
SCARF1-207ENST00000573867 PANK1Q8TE04 598 aa34.64■■■■□ 3.14
SCARF1-207ENST00000573867 FAM84BQ96KN1 310 aaPredicted RBP34.64■■■■□ 3.14
SCARF1-207ENST00000573867 FGFR2P21802 821 aa34.62■■■■□ 3.13
SCARF1-207ENST00000573867 ITPRIPQ8IWB1 547 aa34.62■■■■□ 3.13
SCARF1-207ENST00000573867 COPRSQ9NQ92 184 aa34.62■■■■□ 3.13
SCARF1-207ENST00000573867 TRAF5O00463 557 aa34.61■■■■□ 3.13
SCARF1-207ENST00000573867 SRGAP3O43295 1099 aa34.61■■■■□ 3.13
SCARF1-207ENST00000573867 CIAO1O76071 339 aa34.61■■■■□ 3.13
SCARF1-207ENST00000573867 KIF4BQ2VIQ3 1234 aa34.61■■■■□ 3.13
SCARF1-207ENST00000573867 ZBTB7BO15156 539 aaPredicted RBP34.6■■■■□ 3.13
SCARF1-207ENST00000573867 USP17L8P0C7I0 530 aa34.6■■■■□ 3.13
SCARF1-207ENST00000573867 CERS5Q8N5B7 392 aa34.6■■■■□ 3.13
SCARF1-207ENST00000573867 ZC3H15Q8WU90 426 aaKnown RBP34.6■■■■□ 3.13
SCARF1-207ENST00000573867 FBXO3Q9UK99 471 aa34.6■■■■□ 3.13
SCARF1-207ENST00000573867 ASTN2O75129 1339 aaPredicted RBP34.59■■■■□ 3.13
SCARF1-207ENST00000573867 PNMA6EA0A0J9YXQ4 647 aa34.59■■■■□ 3.13
SCARF1-207ENST00000573867 HIBADHP31937 336 aaKnown RBP34.59■■■■□ 3.13
SCARF1-207ENST00000573867 JAG2Q9Y219 1238 aa34.59■■■■□ 3.13
SCARF1-207ENST00000573867 FBXO33Q7Z6M2 555 aa34.58■■■■□ 3.13
SCARF1-207ENST00000573867 TDRD7Q8NHU6 1098 aaKnown RBP34.58■■■■□ 3.13
SCARF1-207ENST00000573867 GLIS2Q9BZE0 524 aaPredicted RBP34.58■■■■□ 3.13
SCARF1-207ENST00000573867 C1orf115Q9H7X2 142 aa34.58■■■■□ 3.13
SCARF1-207ENST00000573867 MYO3BQ8WXR4 1341 aa34.57■■■■□ 3.13
SCARF1-207ENST00000573867 PUM3Q15397 648 aaKnown RBP34.57■■■■□ 3.12
SCARF1-207ENST00000573867 MYOZ2Q9NPC6 264 aa34.56■■■■□ 3.12
SCARF1-207ENST00000573867 CREBZFQ9NS37 354 aa34.56■■■■□ 3.12
SCARF1-207ENST00000573867 IL15P40933 162 aaPredicted RBP34.54■■■■□ 3.12
SCARF1-207ENST00000573867 DLK2Q6UY11 383 aa34.54■■■■□ 3.12
SCARF1-207ENST00000573867 KIAA0825Q8IV33 1275 aa34.54■■■■□ 3.12
SCARF1-207ENST00000573867 YTHDC1Q96MU7 727 aaKnown RBP34.54■■■■□ 3.12
SCARF1-207ENST00000573867 FAM205AQ6ZU69 1335 aa34.54■■■■□ 3.12
SCARF1-207ENST00000573867 SASH1O94885 1247 aa34.53■■■■□ 3.12
SCARF1-207ENST00000573867 BCAMP50895 628 aa34.53■■■■□ 3.12
SCARF1-207ENST00000573867 IQSEC3Q9UPP2 1182 aaPredicted RBP34.53■■■■□ 3.12
SCARF1-207ENST00000573867 LPIN2Q92539 896 aa34.52■■■■□ 3.12
SCARF1-207ENST00000573867 CEP126Q9P2H0 1117 aa34.52■■■■□ 3.12
SCARF1-207ENST00000573867 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP34.52■■■■□ 3.12
SCARF1-207ENST00000573867 TMEM88BA6NKF7 163 aa34.51■■■■□ 3.12
SCARF1-207ENST00000573867 IFIT1P09914 478 aaKnown RBP34.51■■■■□ 3.12
SCARF1-207ENST00000573867 SCARF1Q14162 830 aa34.51■■■■□ 3.12
SCARF1-207ENST00000573867 KLRG1Q96E93 195 aa34.51■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms