RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 SULF1Q8IWU6 871 aa18.24■□□□□ 0.51
TVP23A-208ENST00000573857 GBA2Q9HCG7 927 aaPredicted RBP18.24■□□□□ 0.51
TVP23A-208ENST00000573857 PSME4Q14997 1843 aa18.23■□□□□ 0.51
TVP23A-208ENST00000573857 USP17L8P0C7I0 530 aa18.23■□□□□ 0.51
TVP23A-208ENST00000573857 NOGQ13253 232 aa18.23■□□□□ 0.51
TVP23A-208ENST00000573857 SCARF1Q14162 830 aa18.23■□□□□ 0.51
TVP23A-208ENST00000573857 C2orf69Q8N8R5 385 aa18.23■□□□□ 0.51
TVP23A-208ENST00000573857 MYOZ2Q9NPC6 264 aa18.23■□□□□ 0.51
TVP23A-208ENST00000573857 LEMD3Q9Y2U8 911 aa18.23■□□□□ 0.51
TVP23A-208ENST00000573857 SPEF2Q9C093 1822 aa18.23■□□□□ 0.51
TVP23A-208ENST00000573857 CA12O43570 354 aa18.22■□□□□ 0.51
TVP23A-208ENST00000573857 ANGEL2Q5VTE6 544 aaKnown RBP18.22■□□□□ 0.51
TVP23A-208ENST00000573857 COA1Q9GZY4 146 aa18.22■□□□□ 0.51
TVP23A-208ENST00000573857 CACNA1FO60840 1977 aa18.21■□□□□ 0.51
TVP23A-208ENST00000573857 F6X3S4 739 aa18.21■□□□□ 0.51
TVP23A-208ENST00000573857 DACT2Q5SW24 774 aa18.21■□□□□ 0.51
TVP23A-208ENST00000573857 BEND3Q5T5X7 828 aa18.21■□□□□ 0.51
TVP23A-208ENST00000573857 TXNRD3Q86VQ6 643 aa18.21■□□□□ 0.51
TVP23A-208ENST00000573857 FAM9BQ8IZU0 186 aa18.21■□□□□ 0.51
TVP23A-208ENST00000573857 MPHOSPH8Q99549 860 aa18.21■□□□□ 0.51
TVP23A-208ENST00000573857 ANKRD2Q9GZV1 360 aa18.21■□□□□ 0.51
TVP23A-208ENST00000573857 TSKSQ9UJT2 592 aa18.21■□□□□ 0.51
TVP23A-208ENST00000573857 ZNF804BA4D1E1 1349 aa18.21■□□□□ 0.51
TVP23A-208ENST00000573857 POLR2AP24928 1970 aaKnown RBP18.21■□□□□ 0.5
TVP23A-208ENST00000573857 FAM155AB1AL88 458 aaPredicted RBP18.2■□□□□ 0.5
TVP23A-208ENST00000573857 STRIP1Q5VSL9 837 aa18.2■□□□□ 0.5
TVP23A-208ENST00000573857 RGMBQ6NW40 437 aa18.2■□□□□ 0.5
TVP23A-208ENST00000573857 CDCA5Q96FF9 252 aa18.2■□□□□ 0.5
TVP23A-208ENST00000573857 ZIC5Q96T25 663 aa18.2■□□□□ 0.5
TVP23A-208ENST00000573857 MXD3Q9BW11 206 aa18.2■□□□□ 0.5
TVP23A-208ENST00000573857 KLRK1P26718 216 aa18.19■□□□□ 0.5
TVP23A-208ENST00000573857 FOXO4P98177 505 aa18.19■□□□□ 0.5
TVP23A-208ENST00000573857 FBXW7Q969H0 707 aa18.19■□□□□ 0.5
TVP23A-208ENST00000573857 PITPNM2Q9BZ72 1349 aa18.19■□□□□ 0.5
TVP23A-208ENST00000573857 ANKRD18BA2A2Z9 1011 aa18.18■□□□□ 0.5
TVP23A-208ENST00000573857 CHRNDQ07001 517 aa18.18■□□□□ 0.5
TVP23A-208ENST00000573857 CCDC102AQ96A19 550 aa18.18■□□□□ 0.5
TVP23A-208ENST00000573857 MYO3BQ8WXR4 1341 aa18.18■□□□□ 0.5
TVP23A-208ENST00000573857 KCNJ4P48050 445 aa18.17■□□□□ 0.5
TVP23A-208ENST00000573857 ZNF157P51786 506 aaPredicted RBP18.17■□□□□ 0.5
TVP23A-208ENST00000573857 IFIT5Q13325 482 aaKnown RBP18.17■□□□□ 0.5
TVP23A-208ENST00000573857 OGFOD1Q8N543 542 aa18.17■□□□□ 0.5
TVP23A-208ENST00000573857 ABHD8Q96I13 439 aa18.17■□□□□ 0.5
TVP23A-208ENST00000573857 ZNF646O15015 1829 aaPredicted RBP18.16■□□□□ 0.5
TVP23A-208ENST00000573857 GRM8O00222 908 aa18.16■□□□□ 0.5
TVP23A-208ENST00000573857 NBPF9Q3BBW0 867 aa18.16■□□□□ 0.5
TVP23A-208ENST00000573857 CHMP3Q9Y3E7 222 aa18.16■□□□□ 0.5
TVP23A-208ENST00000573857 SLC10A3P09131 477 aa18.15■□□□□ 0.5
TVP23A-208ENST00000573857 MMP14P50281 582 aa18.15■□□□□ 0.5
TVP23A-208ENST00000573857 TTLL5Q6EMB2 1281 aa18.15■□□□□ 0.5
TVP23A-208ENST00000573857 ZNF521Q96K83 1311 aa18.15■□□□□ 0.5
TVP23A-208ENST00000573857 IRS2Q9Y4H2 1338 aa18.15■□□□□ 0.5
TVP23A-208ENST00000573857 SNAP23O00161 211 aa18.14■□□□□ 0.49
TVP23A-208ENST00000573857 WNT10BO00744 389 aa18.14■□□□□ 0.49
TVP23A-208ENST00000573857 FKBP1BP68106 108 aa18.14■□□□□ 0.49
TVP23A-208ENST00000573857 GTF2IP78347 998 aa18.14■□□□□ 0.49
TVP23A-208ENST00000573857 KIF23Q02241 960 aaPredicted RBP18.14■□□□□ 0.49
TVP23A-208ENST00000573857 EPHA10Q5JZY3 1008 aa18.14■□□□□ 0.49
TVP23A-208ENST00000573857 LMBR1LQ6UX01 489 aa18.14■□□□□ 0.49
TVP23A-208ENST00000573857 HELBQ8NG08 1087 aaPredicted RBP18.14■□□□□ 0.49
TVP23A-208ENST00000573857 CD209Q9NNX6 404 aa18.14■□□□□ 0.49
TVP23A-208ENST00000573857 SCAF8Q9UPN6 1271 aaKnown RBP18.14■□□□□ 0.49
TVP23A-208ENST00000573857 PAPPA2Q9BXP8 1791 aa18.13■□□□□ 0.49
TVP23A-208ENST00000573857 TAF5LO75529 589 aa18.13■□□□□ 0.49
TVP23A-208ENST00000573857 ALDH1L1O75891 902 aa18.13■□□□□ 0.49
TVP23A-208ENST00000573857 C15orf52Q6ZUT6 534 aaKnown RBP18.13■□□□□ 0.49
TVP23A-208ENST00000573857 SASH1O94885 1247 aa18.12■□□□□ 0.49
TVP23A-208ENST00000573857 CCDC57Q2TAC2 916 aa18.12■□□□□ 0.49
TVP23A-208ENST00000573857 SLC4A10Q6U841 1118 aa18.12■□□□□ 0.49
TVP23A-208ENST00000573857 KIAA0825Q8IV33 1275 aa18.12■□□□□ 0.49
TVP23A-208ENST00000573857 SAGE1Q9NXZ1 904 aa18.12■□□□□ 0.49
TVP23A-208ENST00000573857 C9orf78Q9NZ63 289 aaPredicted RBP18.12■□□□□ 0.49
TVP23A-208ENST00000573857 PRAMEF18Q5VWM3 479 aa18.11■□□□□ 0.49
TVP23A-208ENST00000573857 RASAL3Q86YV0 1011 aa18.11■□□□□ 0.49
TVP23A-208ENST00000573857 ZNF594Q96JF6 807 aaPredicted RBP18.11■□□□□ 0.49
TVP23A-208ENST00000573857 SRCIN1Q9C0H9 1055 aa18.11■□□□□ 0.49
TVP23A-208ENST00000573857 HDAC9Q9UKV0 1011 aa18.11■□□□□ 0.49
TVP23A-208ENST00000573857 TAF7LQ5H9L4 462 aa18.1■□□□□ 0.49
TVP23A-208ENST00000573857 LDHAL6AQ6ZMR3 332 aa18.1■□□□□ 0.49
TVP23A-208ENST00000573857 MOB2Q70IA6 237 aa18.1■□□□□ 0.49
TVP23A-208ENST00000573857 ZBED3Q96IU2 234 aaPredicted RBP18.1■□□□□ 0.49
TVP23A-208ENST00000573857 IL1R1P14778 569 aa18.09■□□□□ 0.49
TVP23A-208ENST00000573857 ZNF804AQ7Z570 1209 aa18.09■□□□□ 0.49
TVP23A-208ENST00000573857 APOBEC3FQ8IUX4 373 aaKnown RBP18.09■□□□□ 0.49
TVP23A-208ENST00000573857 CERS5Q8N5B7 392 aa18.09■□□□□ 0.49
TVP23A-208ENST00000573857 CSRNP1Q96S65 589 aa18.09■□□□□ 0.49
TVP23A-208ENST00000573857 CNNM1Q9NRU3 951 aa18.09■□□□□ 0.49
TVP23A-208ENST00000573857 RNF186Q9NXI6 227 aa18.09■□□□□ 0.49
TVP23A-208ENST00000573857 UBE2Q2LH0YL09 131 aa18.08■□□□□ 0.48
TVP23A-208ENST00000573857 SUCLG2Q96I99 432 aa18.08■□□□□ 0.48
TVP23A-208ENST00000573857 MCOLN1Q9GZU1 580 aa18.08■□□□□ 0.48
TVP23A-208ENST00000573857 A0A1B0GUL6 1792 aa18.08■□□□□ 0.48
TVP23A-208ENST00000573857 CASP8AP2Q9UKL3 1982 aa18.08■□□□□ 0.48
TVP23A-208ENST00000573857 UTYO14607 1347 aa18.07■□□□□ 0.48
TVP23A-208ENST00000573857 PLIN1O60240 522 aa18.07■□□□□ 0.48
TVP23A-208ENST00000573857 TRPA1O75762 1119 aa18.07■□□□□ 0.48
TVP23A-208ENST00000573857 NF2P35240 595 aa18.07■□□□□ 0.48
TVP23A-208ENST00000573857 REM2Q8IYK8 340 aaPredicted RBP18.07■□□□□ 0.48
TVP23A-208ENST00000573857 KAZALD1Q96I82 304 aa18.07■□□□□ 0.48
TVP23A-208ENST00000573857 CCDC85CA6NKD9 419 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms