RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 CPNE3O75131 537 aaKnown RBP8.5□□□□□ -1.05
CDC27-215ENST00000573550 NEFLP07196 543 aa8.5□□□□□ -1.05
CDC27-215ENST00000573550 TRIM28Q13263 835 aaKnown RBP8.5□□□□□ -1.05
CDC27-215ENST00000573550 DSC3Q14574 896 aa8.5□□□□□ -1.05
CDC27-215ENST00000573550 PLA2G4EQ3MJ16 856 aa8.5□□□□□ -1.05
CDC27-215ENST00000573550 GALNT12Q8IXK2 581 aa8.5□□□□□ -1.05
CDC27-215ENST00000573550 FMR1NBQ8N0W7 255 aaPredicted RBP8.5□□□□□ -1.05
CDC27-215ENST00000573550 CACTIN-AS1Q8N1I8 211 aa8.5□□□□□ -1.05
CDC27-215ENST00000573550 DTWD1Q8N5C7 304 aa8.5□□□□□ -1.05
CDC27-215ENST00000573550 IL22RA1Q8N6P7 574 aa8.5□□□□□ -1.05
CDC27-215ENST00000573550 OSMRQ99650 979 aa8.5□□□□□ -1.05
CDC27-215ENST00000573550 EIF1AYO14602 144 aaKnown RBP8.49□□□□□ -1.05
CDC27-215ENST00000573550 TREHO43280 583 aa8.49□□□□□ -1.05
CDC27-215ENST00000573550 TMEM102Q8N9M5 508 aaPredicted RBP8.49□□□□□ -1.05
CDC27-215ENST00000573550 LACRTQ9GZZ8 138 aa8.49□□□□□ -1.05
CDC27-215ENST00000573550 DNAJC25Q9H1X3 360 aa8.49□□□□□ -1.05
CDC27-215ENST00000573550 PDE2AO00408 941 aaPredicted RBP8.48□□□□□ -1.05
CDC27-215ENST00000573550 DEAF1O75398 565 aaPredicted RBP8.48□□□□□ -1.05
CDC27-215ENST00000573550 ELNP15502 786 aa8.48□□□□□ -1.05
CDC27-215ENST00000573550 CHRNA4P43681 627 aa8.48□□□□□ -1.05
CDC27-215ENST00000573550 RAC1P63000 192 aa8.48□□□□□ -1.05
CDC27-215ENST00000573550 GRIK4Q16099 956 aa8.48□□□□□ -1.05
CDC27-215ENST00000573550 ASB16Q96NS5 453 aa8.48□□□□□ -1.05
CDC27-215ENST00000573550 CSRNP1Q96S65 589 aa8.48□□□□□ -1.05
CDC27-215ENST00000573550 ADAM19Q9H013 955 aa8.48□□□□□ -1.05
CDC27-215ENST00000573550 PTPRAP18433 802 aa8.47□□□□□ -1.05
CDC27-215ENST00000573550 EPHA1P21709 976 aa8.47□□□□□ -1.05
CDC27-215ENST00000573550 CD163Q86VB7 1156 aa8.47□□□□□ -1.05
CDC27-215ENST00000573550 HOMEZQ8IX15 550 aa8.47□□□□□ -1.05
CDC27-215ENST00000573550 NXPE3Q969Y0 559 aa8.47□□□□□ -1.05
CDC27-215ENST00000573550 BHLHE41Q9C0J9 482 aaPredicted RBP8.47□□□□□ -1.05
CDC27-215ENST00000573550 NPHS2Q9NP85 383 aa8.47□□□□□ -1.05
CDC27-215ENST00000573550 A0A1W2PP55 124 aa8.46□□□□□ -1.06
CDC27-215ENST00000573550 CDC27P30260 824 aa8.46□□□□□ -1.06
CDC27-215ENST00000573550 SETDB1Q15047 1291 aa8.46□□□□□ -1.06
CDC27-215ENST00000573550 FBXO11Q86XK2 927 aa8.46□□□□□ -1.06
CDC27-215ENST00000573550 ZSCAN29Q8IWY8 852 aaPredicted RBP8.46□□□□□ -1.06
CDC27-215ENST00000573550 MUC3BQ9H195 1237 aa8.46□□□□□ -1.06
CDC27-215ENST00000573550 SH2B1Q9NRF2 756 aaPredicted RBP8.46□□□□□ -1.06
CDC27-215ENST00000573550 SOX13Q9UN79 622 aa8.46□□□□□ -1.06
CDC27-215ENST00000573550 PPME1Q9Y570 386 aa8.46□□□□□ -1.06
CDC27-215ENST00000573550 C1QTNF9BB2RNN3 333 aa8.45□□□□□ -1.06
CDC27-215ENST00000573550 TM4SF5O14894 197 aa8.45□□□□□ -1.06
CDC27-215ENST00000573550 SELPP16109 830 aa8.45□□□□□ -1.06
CDC27-215ENST00000573550 FMR1Q06787 632 aaKnown RBP eCLIP8.45□□□□□ -1.06
CDC27-215ENST00000573550 TXNDC11Q6PKC3 985 aa8.45□□□□□ -1.06
CDC27-215ENST00000573550 CCDC74AQ96AQ1 378 aa8.45□□□□□ -1.06
CDC27-215ENST00000573550 LINC01387J3KSC0 135 aa8.44□□□□□ -1.06
CDC27-215ENST00000573550 DLL1O00548 723 aa8.44□□□□□ -1.06
CDC27-215ENST00000573550 KIAA0319Q5VV43 1072 aa8.44□□□□□ -1.06
CDC27-215ENST00000573550 SHISA2Q6UWI4 295 aa8.44□□□□□ -1.06
CDC27-215ENST00000573550 TCF12Q99081 682 aa8.44□□□□□ -1.06
CDC27-215ENST00000573550 SRA1Q9HD15 236 aaKnown RBP8.44□□□□□ -1.06
CDC27-215ENST00000573550 METTL12A8MUP2 240 aa8.43□□□□□ -1.06
CDC27-215ENST00000573550 APBA3O96018 575 aa8.43□□□□□ -1.06
CDC27-215ENST00000573550 PROCP04070 461 aa8.43□□□□□ -1.06
CDC27-215ENST00000573550 PLCB3Q01970 1234 aa8.43□□□□□ -1.06
CDC27-215ENST00000573550 ENOX2Q16206 610 aaKnown RBP8.43□□□□□ -1.06
CDC27-215ENST00000573550 GPAT2Q6NUI2 795 aa8.43□□□□□ -1.06
CDC27-215ENST00000573550 CCNJLQ8IV13 435 aa8.43□□□□□ -1.06
CDC27-215ENST00000573550 MAP4K3Q8IVH8 894 aa8.43□□□□□ -1.06
CDC27-215ENST00000573550 NACC1Q96RE7 527 aa8.43□□□□□ -1.06
CDC27-215ENST00000573550 PNMA6FA0A0J9YX94 578 aa8.42□□□□□ -1.06
CDC27-215ENST00000573550 H3BRJ5 948 aa8.42□□□□□ -1.06
CDC27-215ENST00000573550 VN1R5Q7Z5H4 357 aa8.42□□□□□ -1.06
CDC27-215ENST00000573550 GALNT11Q8NCW6 608 aa8.42□□□□□ -1.06
CDC27-215ENST00000573550 ASAP3Q8TDY4 903 aa8.42□□□□□ -1.06
CDC27-215ENST00000573550 BSNDQ8WZ55 320 aa8.42□□□□□ -1.06
CDC27-215ENST00000573550 LENG1Q96BZ8 264 aaPredicted RBP8.42□□□□□ -1.06
CDC27-215ENST00000573550 LIN7BQ9HAP6 207 aa8.42□□□□□ -1.06
CDC27-215ENST00000573550 CDC25BP30305 580 aa8.41□□□□□ -1.06
CDC27-215ENST00000573550 GRIA4P48058 902 aa8.41□□□□□ -1.06
CDC27-215ENST00000573550 EPS8L3Q8TE67 593 aaKnown RBP8.41□□□□□ -1.06
CDC27-215ENST00000573550 SPOCK3Q9BQ16 436 aa8.41□□□□□ -1.06
CDC27-215ENST00000573550 GZF1Q9H116 711 aaPredicted RBP8.41□□□□□ -1.06
CDC27-215ENST00000573550 FAM177BA6PVY3 158 aa8.4□□□□□ -1.06
CDC27-215ENST00000573550 C9orf172C9J069 976 aa8.4□□□□□ -1.06
CDC27-215ENST00000573550 FSCN2O14926 492 aa8.4□□□□□ -1.06
CDC27-215ENST00000573550 IGHA1P01876 353 aa8.4□□□□□ -1.06
CDC27-215ENST00000573550 ADGRE1Q14246 886 aa8.4□□□□□ -1.06
CDC27-215ENST00000573550 MBTPS1Q14703 1052 aa8.4□□□□□ -1.06
CDC27-215ENST00000573550 PI16Q6UXB8 463 aa8.4□□□□□ -1.06
CDC27-215ENST00000573550 DNAJC14Q6Y2X3 702 aaPredicted RBP8.4□□□□□ -1.06
CDC27-215ENST00000573550 CARD10Q9BWT7 1032 aa8.4□□□□□ -1.06
CDC27-215ENST00000573550 EHD4Q9H223 541 aa8.4□□□□□ -1.06
CDC27-215ENST00000573550 P4HBP07237 508 aaKnown RBP8.39□□□□□ -1.07
CDC27-215ENST00000573550 MAPK8P45983 427 aa8.39□□□□□ -1.07
CDC27-215ENST00000573550 CABP4P57796 275 aa8.39□□□□□ -1.07
CDC27-215ENST00000573550 GRM2Q14416 872 aa8.39□□□□□ -1.07
CDC27-215ENST00000573550 PRPF40BQ6NWY9 871 aaKnown RBP8.39□□□□□ -1.07
CDC27-215ENST00000573550 IGF2-ASQ6U949 168 aa8.39□□□□□ -1.07
CDC27-215ENST00000573550 GLIS3Q8NEA6 775 aa8.39□□□□□ -1.07
CDC27-215ENST00000573550 WNT8BQ93098 351 aa8.39□□□□□ -1.07
CDC27-215ENST00000573550 ABCB6Q9NP58 842 aa8.39□□□□□ -1.07
CDC27-215ENST00000573550 A0A096LPE4 126 aa8.38□□□□□ -1.07
CDC27-215ENST00000573550 A0A1W2PPZ6 126 aa8.38□□□□□ -1.07
CDC27-215ENST00000573550 MSTNO14793 375 aa8.38□□□□□ -1.07
CDC27-215ENST00000573550 PIP4K2BP78356 416 aa8.38□□□□□ -1.07
CDC27-215ENST00000573550 NRG1Q02297 640 aaPredicted RBP8.38□□□□□ -1.07
CDC27-215ENST00000573550 SPRED3Q2MJR0 410 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms