RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 CAPNS2Q96L46 248 aa12.22□□□□□ -0.45
NPLOC4-212ENST00000573328 GGA3Q9NZ52 723 aa12.22□□□□□ -0.45
NPLOC4-212ENST00000573328 PGAP2Q9UHJ9 254 aa12.22□□□□□ -0.45
NPLOC4-212ENST00000573328 LEMD3Q9Y2U8 911 aa12.22□□□□□ -0.45
NPLOC4-212ENST00000573328 TLL2Q9Y6L7 1015 aa12.22□□□□□ -0.45
NPLOC4-212ENST00000573328 ZNF609O15014 1411 aa12.21□□□□□ -0.45
NPLOC4-212ENST00000573328 FOXN1O15353 648 aa12.21□□□□□ -0.45
NPLOC4-212ENST00000573328 ALDH1L1O75891 902 aa12.21□□□□□ -0.45
NPLOC4-212ENST00000573328 CHRNDQ07001 517 aa12.21□□□□□ -0.45
NPLOC4-212ENST00000573328 CCDC57Q2TAC2 916 aa12.21□□□□□ -0.45
NPLOC4-212ENST00000573328 LMBR1LQ6UX01 489 aa12.21□□□□□ -0.45
NPLOC4-212ENST00000573328 BEGAINQ9BUH8 593 aa12.21□□□□□ -0.45
NPLOC4-212ENST00000573328 MYH13Q9UKX3 1938 aa12.21□□□□□ -0.46
NPLOC4-212ENST00000573328 AKAP11Q9UKA4 1901 aa12.2□□□□□ -0.46
NPLOC4-212ENST00000573328 ADM5C9JUS6 153 aa12.2□□□□□ -0.46
NPLOC4-212ENST00000573328 USP17L8P0C7I0 530 aa12.2□□□□□ -0.46
NPLOC4-212ENST00000573328 CTCFP49711 727 aaPredicted RBP12.2□□□□□ -0.46
NPLOC4-212ENST00000573328 FOXO4P98177 505 aa12.2□□□□□ -0.46
NPLOC4-212ENST00000573328 MAP2K1Q02750 393 aaPredicted RBP12.2□□□□□ -0.46
NPLOC4-212ENST00000573328 SULF1Q8IWU6 871 aa12.2□□□□□ -0.46
NPLOC4-212ENST00000573328 COA1Q9GZY4 146 aa12.2□□□□□ -0.46
NPLOC4-212ENST00000573328 MYO3BQ8WXR4 1341 aa12.19□□□□□ -0.46
NPLOC4-212ENST00000573328 PLIN1O60240 522 aa12.19□□□□□ -0.46
NPLOC4-212ENST00000573328 TAF5LO75529 589 aa12.19□□□□□ -0.46
NPLOC4-212ENST00000573328 KLRK1P26718 216 aa12.19□□□□□ -0.46
NPLOC4-212ENST00000573328 SAPCD2Q86UD0 394 aa12.19□□□□□ -0.46
NPLOC4-212ENST00000573328 TXNRD3Q86VQ6 643 aa12.19□□□□□ -0.46
NPLOC4-212ENST00000573328 MRPL50Q8N5N7 158 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-212ENST00000573328 HELBQ8NG08 1087 aaPredicted RBP12.19□□□□□ -0.46
NPLOC4-212ENST00000573328 MYOZ2Q9NPC6 264 aa12.19□□□□□ -0.46
NPLOC4-212ENST00000573328 CNNM1Q9NRU3 951 aa12.19□□□□□ -0.46
NPLOC4-212ENST00000573328 ARAP2Q8WZ64 1704 aa12.19□□□□□ -0.46
NPLOC4-212ENST00000573328 ASTN2O75129 1339 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 PTPRCP08575 1304 aa12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 AOC2O75106 756 aa12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 CAPN15O75808 1086 aa12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 HUNKP57058 714 aa12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 ZNF280AP59817 542 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 SLFN5Q08AF3 891 aa12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 SCARF1Q14162 830 aa12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 EPHA10Q5JZY3 1008 aa12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 ANGEL2Q5VTE6 544 aaKnown RBP12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 DLK2Q6UY11 383 aa12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 LDHAL6AQ6ZMR3 332 aa12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 OGFOD1Q8N543 542 aa12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 SUCLG2Q96I99 432 aa12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 ZNF594Q96JF6 807 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 MXD3Q9BW11 206 aa12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 WBP1LQ9NX94 342 aa12.18□□□□□ -0.46
NPLOC4-212ENST00000573328 GTF2IP78347 998 aa12.17□□□□□ -0.46
NPLOC4-212ENST00000573328 DACT2Q5SW24 774 aa12.17□□□□□ -0.46
NPLOC4-212ENST00000573328 STRIP1Q5VSL9 837 aa12.17□□□□□ -0.46
NPLOC4-212ENST00000573328 TTLL5Q6EMB2 1281 aa12.17□□□□□ -0.46
NPLOC4-212ENST00000573328 ZNF804AQ7Z570 1209 aa12.17□□□□□ -0.46
NPLOC4-212ENST00000573328 C2orf69Q8N8R5 385 aa12.17□□□□□ -0.46
NPLOC4-212ENST00000573328 SSH1Q8WYL5 1049 aa12.17□□□□□ -0.46
NPLOC4-212ENST00000573328 GBA2Q9HCG7 927 aaPredicted RBP12.17□□□□□ -0.46
NPLOC4-212ENST00000573328 SMC4Q9NTJ3 1288 aa12.17□□□□□ -0.46
NPLOC4-212ENST00000573328 PAPPA2Q9BXP8 1791 aa12.17□□□□□ -0.46
NPLOC4-212ENST00000573328 CCER2I3L3R5 266 aa12.16□□□□□ -0.46
NPLOC4-212ENST00000573328 SNAP23O00161 211 aa12.16□□□□□ -0.46
NPLOC4-212ENST00000573328 LBX1P52954 281 aa12.16□□□□□ -0.46
NPLOC4-212ENST00000573328 KIAA0825Q8IV33 1275 aa12.16□□□□□ -0.46
NPLOC4-212ENST00000573328 CDCA5Q96FF9 252 aa12.16□□□□□ -0.46
NPLOC4-212ENST00000573328 CDCA7LQ96GN5 454 aa12.16□□□□□ -0.46
NPLOC4-212ENST00000573328 HHIPL1Q96JK4 782 aa12.16□□□□□ -0.46
NPLOC4-212ENST00000573328 GMLQ99445 158 aa12.16□□□□□ -0.46
NPLOC4-212ENST00000573328 HDAC9Q9UKV0 1011 aa12.16□□□□□ -0.46
NPLOC4-212ENST00000573328 NBPF7P0C2Y1 421 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-212ENST00000573328 ALDH1L2Q3SY69 923 aa12.15□□□□□ -0.46
NPLOC4-212ENST00000573328 BICC1Q9H694 974 aaKnown RBP12.15□□□□□ -0.46
NPLOC4-212ENST00000573328 CD209Q9NNX6 404 aa12.15□□□□□ -0.46
NPLOC4-212ENST00000573328 PRDM10Q9NQV6 1147 aa12.15□□□□□ -0.46
NPLOC4-212ENST00000573328 SCAF8Q9UPN6 1271 aaKnown RBP12.15□□□□□ -0.46
NPLOC4-212ENST00000573328 CASP8AP2Q9UKL3 1982 aa12.15□□□□□ -0.46
NPLOC4-212ENST00000573328 PITPNM2Q9BZ72 1349 aa12.14□□□□□ -0.47
NPLOC4-212ENST00000573328 SASH1O94885 1247 aa12.14□□□□□ -0.47
NPLOC4-212ENST00000573328 HSPA8P11142 646 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-212ENST00000573328 MAP2K2P36507 400 aa12.14□□□□□ -0.47
NPLOC4-212ENST00000573328 NBPF9Q3BBW0 867 aa12.14□□□□□ -0.47
NPLOC4-212ENST00000573328 RGMBQ6NW40 437 aa12.14□□□□□ -0.47
NPLOC4-212ENST00000573328 UTYO14607 1347 aa12.13□□□□□ -0.47
NPLOC4-212ENST00000573328 F8W031 263 aaPredicted RBP12.13□□□□□ -0.47
NPLOC4-212ENST00000573328 WNT10BO00744 389 aa12.13□□□□□ -0.47
NPLOC4-212ENST00000573328 ZNF157P51786 506 aaPredicted RBP12.13□□□□□ -0.47
NPLOC4-212ENST00000573328 NOGQ13253 232 aa12.13□□□□□ -0.47
NPLOC4-212ENST00000573328 TTLL12Q14166 644 aaPredicted RBP12.13□□□□□ -0.47
NPLOC4-212ENST00000573328 TSKSQ9UJT2 592 aa12.13□□□□□ -0.47
NPLOC4-212ENST00000573328 JAG2Q9Y219 1238 aa12.13□□□□□ -0.47
NPLOC4-212ENST00000573328 NF2P35240 595 aa12.12□□□□□ -0.47
NPLOC4-212ENST00000573328 MMP14P50281 582 aa12.12□□□□□ -0.47
NPLOC4-212ENST00000573328 BRPF1P55201 1214 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-212ENST00000573328 C15orf52Q6ZUT6 534 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-212ENST00000573328 KAZALD1Q96I82 304 aa12.12□□□□□ -0.47
NPLOC4-212ENST00000573328 PUS3Q9BZE2 481 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-212ENST00000573328 MROH5Q6ZUA9 1318 aa12.11□□□□□ -0.47
NPLOC4-212ENST00000573328 IRS2Q9Y4H2 1338 aa12.11□□□□□ -0.47
NPLOC4-212ENST00000573328 CT47B1P0C2W7 299 aaPredicted RBP12.11□□□□□ -0.47
NPLOC4-212ENST00000573328 IL1R1P14778 569 aa12.11□□□□□ -0.47
NPLOC4-212ENST00000573328 UBE4AQ14139 1066 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms