RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 RASA3Q14644 834 aa12.15□□□□□ -0.46
CHRNB1-205ENST00000573209 SMC1AQ14683 1233 aaKnown RBP12.15□□□□□ -0.46
CHRNB1-205ENST00000573209 MFSD4BQ5TF39 518 aa12.15□□□□□ -0.46
CHRNB1-205ENST00000573209 SLX1AQ9BQ83 275 aa12.15□□□□□ -0.46
CHRNB1-205ENST00000573209 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.15□□□□□ -0.46
CHRNB1-205ENST00000573209 CRB1P82279 1406 aa12.15□□□□□ -0.46
CHRNB1-205ENST00000573209 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
CHRNB1-205ENST00000573209 SCRN1Q12765 414 aa12.14□□□□□ -0.47
CHRNB1-205ENST00000573209 JPH2Q9BR39 696 aaPredicted RBP12.14□□□□□ -0.47
CHRNB1-205ENST00000573209 IQCGQ9H095 443 aaKnown RBP12.14□□□□□ -0.47
CHRNB1-205ENST00000573209 USP31Q70CQ4 1352 aa12.14□□□□□ -0.47
CHRNB1-205ENST00000573209 RAD21O60216 631 aa12.14□□□□□ -0.47
CHRNB1-205ENST00000573209 SDSP20132 328 aa12.14□□□□□ -0.47
CHRNB1-205ENST00000573209 GCKP35557 465 aa12.14□□□□□ -0.47
CHRNB1-205ENST00000573209 DCTN1Q14203 1278 aa12.14□□□□□ -0.47
CHRNB1-205ENST00000573209 KCNV1Q6PIU1 500 aa12.14□□□□□ -0.47
CHRNB1-205ENST00000573209 OSBPL3Q9H4L5 887 aa12.14□□□□□ -0.47
CHRNB1-205ENST00000573209 CEP126Q9P2H0 1117 aa12.14□□□□□ -0.47
CHRNB1-205ENST00000573209 USP6P35125 1406 aa12.13□□□□□ -0.47
CHRNB1-205ENST00000573209 PREPLQ4J6C6 727 aaPredicted RBP12.13□□□□□ -0.47
CHRNB1-205ENST00000573209 MYLK4Q86YV6 388 aaPredicted RBP12.13□□□□□ -0.47
CHRNB1-205ENST00000573209 UTP14AQ9BVJ6 771 aaKnown RBP12.13□□□□□ -0.47
CHRNB1-205ENST00000573209 USP54Q70EL1 1684 aa12.13□□□□□ -0.47
CHRNB1-205ENST00000573209 SULT6B1Q6IMI4 303 aa12.13□□□□□ -0.47
CHRNB1-205ENST00000573209 CWC27Q6UX04 472 aaKnown RBP12.13□□□□□ -0.47
CHRNB1-205ENST00000573209 CCDC34Q96HJ3 373 aa12.13□□□□□ -0.47
CHRNB1-205ENST00000573209 PLEKHG4BQ96PX9 1271 aa12.13□□□□□ -0.47
CHRNB1-205ENST00000573209 NSFL1CQ9UNZ2 370 aaKnown RBP12.13□□□□□ -0.47
CHRNB1-205ENST00000573209 PRR36Q9H6K5 1346 aa12.12□□□□□ -0.47
CHRNB1-205ENST00000573209 RBM47A0AV96 593 aaKnown RBP12.12□□□□□ -0.47
CHRNB1-205ENST00000573209 EME2A4GXA9 379 aaPredicted RBP12.12□□□□□ -0.47
CHRNB1-205ENST00000573209 ERC2O15083 957 aa12.12□□□□□ -0.47
CHRNB1-205ENST00000573209 RAB27AP51159 221 aa12.12□□□□□ -0.47
CHRNB1-205ENST00000573209 TXNDC2Q86VQ3 553 aa12.12□□□□□ -0.47
CHRNB1-205ENST00000573209 CCT4P50991 539 aaKnown RBP12.12□□□□□ -0.47
CHRNB1-205ENST00000573209 KIAA1328Q86T90 577 aa12.12□□□□□ -0.47
CHRNB1-205ENST00000573209 TCP11Q8WWU5 503 aa12.12□□□□□ -0.47
CHRNB1-205ENST00000573209 KAT2BQ92831 832 aa12.12□□□□□ -0.47
CHRNB1-205ENST00000573209 HOMER3Q9NSC5 361 aa12.12□□□□□ -0.47
CHRNB1-205ENST00000573209 ODF2LQ9ULJ1 636 aa12.12□□□□□ -0.47
CHRNB1-205ENST00000573209 PXDNLA1KZ92 1463 aa12.11□□□□□ -0.47
CHRNB1-205ENST00000573209 CHUKO15111 745 aa12.11□□□□□ -0.47
CHRNB1-205ENST00000573209 POTEDQ86YR6 584 aa12.11□□□□□ -0.47
CHRNB1-205ENST00000573209 C16orf71Q8IYS4 520 aaPredicted RBP12.11□□□□□ -0.47
CHRNB1-205ENST00000573209 ZCRB1Q8TBF4 217 aaKnown RBP12.11□□□□□ -0.47
CHRNB1-205ENST00000573209 MEIS3Q99687 375 aa12.11□□□□□ -0.47
CHRNB1-205ENST00000573209 ARPC5LQ9BPX5 153 aa12.11□□□□□ -0.47
CHRNB1-205ENST00000573209 SSH2Q76I76 1423 aa12.11□□□□□ -0.47
CHRNB1-205ENST00000573209 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
CHRNB1-205ENST00000573209 NAT1P18440 290 aa12.11□□□□□ -0.47
CHRNB1-205ENST00000573209 ALDH1B1P30837 517 aa12.11□□□□□ -0.47
CHRNB1-205ENST00000573209 CCDC178Q5BJE1 867 aa12.11□□□□□ -0.47
CHRNB1-205ENST00000573209 KCTD17Q8N5Z5 321 aa12.11□□□□□ -0.47
CHRNB1-205ENST00000573209 LMCD1Q9NZU5 365 aa12.11□□□□□ -0.47
CHRNB1-205ENST00000573209 KDRP35968 1356 aa12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 ECM2O94769 699 aaPredicted RBP12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 CASTP20810 708 aaKnown RBP12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 PTGS1P23219 599 aa12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 MCM2P49736 904 aa12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 PTPN14Q15678 1187 aa12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 HSP90B2PQ58FF3 399 aa12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 ZNF280DQ6N043 979 aa12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 OTUD7AQ8TE49 926 aaPredicted RBP12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 PARD3BQ8TEW8 1205 aa12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 C17orf50Q8WW18 174 aa12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 CABS1Q96KC9 395 aa12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 MTMR7Q9Y216 660 aa12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 PLEKHG3A1L390 1219 aa12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 ZSCAN9O15535 394 aaPredicted RBP12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 PPFIA4O75335 1185 aa12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 PLEKHO1Q53GL0 409 aaPredicted RBP12.1□□□□□ -0.47
CHRNB1-205ENST00000573209 ROBO2Q9HCK4 1378 aa12.09□□□□□ -0.47
CHRNB1-205ENST00000573209 ADAMTS13Q76LX8 1427 aa12.09□□□□□ -0.47
CHRNB1-205ENST00000573209 ERCC6LQ2NKX8 1250 aa12.09□□□□□ -0.47
CHRNB1-205ENST00000573209 ARHGAP29Q52LW3 1261 aa12.09□□□□□ -0.47
CHRNB1-205ENST00000573209 NYAP1Q6ZVC0 841 aa12.09□□□□□ -0.47
CHRNB1-205ENST00000573209 MCM10Q7L590 875 aa12.09□□□□□ -0.47
CHRNB1-205ENST00000573209 C3orf20Q8ND61 904 aa12.09□□□□□ -0.47
CHRNB1-205ENST00000573209 MRFAP1L1Q96HT8 127 aa12.09□□□□□ -0.47
CHRNB1-205ENST00000573209 IRX2Q9BZI1 471 aaPredicted RBP12.09□□□□□ -0.47
CHRNB1-205ENST00000573209 L2HGDHQ9H9P8 463 aa12.09□□□□□ -0.47
CHRNB1-205ENST00000573209 ZCCHC17Q9NP64 241 aaKnown RBP12.09□□□□□ -0.47
CHRNB1-205ENST00000573209 RGPD8O14715 1765 aaPredicted RBP12.09□□□□□ -0.47
CHRNB1-205ENST00000573209 KRT24Q2M2I5 525 aa12.08□□□□□ -0.47
CHRNB1-205ENST00000573209 CCDC183Q5T5S1 534 aa12.08□□□□□ -0.47
CHRNB1-205ENST00000573209 SPATA21Q7Z572 469 aa12.08□□□□□ -0.47
CHRNB1-205ENST00000573209 IQCA1Q86XH1 822 aa12.08□□□□□ -0.47
CHRNB1-205ENST00000573209 SPC24Q8NBT2 197 aa12.08□□□□□ -0.47
CHRNB1-205ENST00000573209 KIF9Q9HAQ2 790 aa12.08□□□□□ -0.47
CHRNB1-205ENST00000573209 PIK3C2AO00443 1686 aa12.08□□□□□ -0.48
CHRNB1-205ENST00000573209 TTC21AQ8NDW8 1320 aa12.08□□□□□ -0.48
CHRNB1-205ENST00000573209 TNRQ92752 1358 aa12.08□□□□□ -0.48
CHRNB1-205ENST00000573209 TMEM2Q9UHN6 1383 aa12.08□□□□□ -0.48
CHRNB1-205ENST00000573209 H7C1W4 665 aa12.08□□□□□ -0.48
CHRNB1-205ENST00000573209 PYGLP06737 847 aa12.08□□□□□ -0.48
CHRNB1-205ENST00000573209 HCLS1P14317 486 aaPredicted RBP12.08□□□□□ -0.48
CHRNB1-205ENST00000573209 PDE1AP54750 535 aa12.08□□□□□ -0.48
CHRNB1-205ENST00000573209 WLSQ5T9L3 541 aa12.08□□□□□ -0.48
CHRNB1-205ENST00000573209 FOXR1Q6PIV2 292 aa12.08□□□□□ -0.48
CHRNB1-205ENST00000573209 ACEP12821 1306 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms