RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 MYO3BQ8WXR4 1341 aa12.67□□□□□ -0.38
TRAPPC1-205ENST00000572656 NEURL1BA8MQ27 555 aa12.67□□□□□ -0.38
TRAPPC1-205ENST00000572656 H7C1W4 665 aa12.67□□□□□ -0.38
TRAPPC1-205ENST00000572656 MMP14P50281 582 aa12.67□□□□□ -0.38
TRAPPC1-205ENST00000572656 CWF19L2Q2TBE0 894 aaKnown RBP12.67□□□□□ -0.38
TRAPPC1-205ENST00000572656 STRIP1Q5VSL9 837 aa12.67□□□□□ -0.38
TRAPPC1-205ENST00000572656 CTU1Q7Z7A3 348 aaKnown RBP12.67□□□□□ -0.38
TRAPPC1-205ENST00000572656 MXD3Q9BW11 206 aa12.67□□□□□ -0.38
TRAPPC1-205ENST00000572656 COA1Q9GZY4 146 aa12.67□□□□□ -0.38
TRAPPC1-205ENST00000572656 LEMD3Q9Y2U8 911 aa12.67□□□□□ -0.38
TRAPPC1-205ENST00000572656 UBE2Q2LH0YL09 131 aa12.66□□□□□ -0.38
TRAPPC1-205ENST00000572656 WNT10BO00744 389 aa12.66□□□□□ -0.38
TRAPPC1-205ENST00000572656 IGHMBP2P38935 993 aaKnown RBP12.66□□□□□ -0.38
TRAPPC1-205ENST00000572656 PRAMEF18Q5VWM3 479 aa12.66□□□□□ -0.38
TRAPPC1-205ENST00000572656 MOB2Q70IA6 237 aa12.66□□□□□ -0.38
TRAPPC1-205ENST00000572656 TSR2Q969E8 191 aaKnown RBP12.66□□□□□ -0.38
TRAPPC1-205ENST00000572656 SCAF8Q9UPN6 1271 aaKnown RBP12.66□□□□□ -0.38
TRAPPC1-205ENST00000572656 SCN9AQ15858 1988 aa12.66□□□□□ -0.38
TRAPPC1-205ENST00000572656 SLC4A2P04920 1241 aa12.65□□□□□ -0.38
TRAPPC1-205ENST00000572656 NF2P35240 595 aa12.65□□□□□ -0.38
TRAPPC1-205ENST00000572656 TTLL12Q14166 644 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC1-205ENST00000572656 CCDC27Q2M243 656 aa12.65□□□□□ -0.38
TRAPPC1-205ENST00000572656 G2E3Q7L622 706 aa12.65□□□□□ -0.38
TRAPPC1-205ENST00000572656 UBE3BQ7Z3V4 1068 aa12.65□□□□□ -0.38
TRAPPC1-205ENST00000572656 TXNRD3Q86VQ6 643 aa12.65□□□□□ -0.38
TRAPPC1-205ENST00000572656 FBXW7Q969H0 707 aa12.65□□□□□ -0.38
TRAPPC1-205ENST00000572656 PLA2G12BQ9BX93 195 aa12.65□□□□□ -0.38
TRAPPC1-205ENST00000572656 ANKRD2Q9GZV1 360 aa12.65□□□□□ -0.38
TRAPPC1-205ENST00000572656 ZNF804BA4D1E1 1349 aa12.64□□□□□ -0.39
TRAPPC1-205ENST00000572656 CASP8AP2Q9UKL3 1982 aa12.64□□□□□ -0.39
TRAPPC1-205ENST00000572656 TM4SF4P48230 202 aa12.64□□□□□ -0.39
TRAPPC1-205ENST00000572656 SOX10P56693 466 aa12.64□□□□□ -0.39
TRAPPC1-205ENST00000572656 GCKRQ14397 625 aa12.64□□□□□ -0.39
TRAPPC1-205ENST00000572656 TWISTNBQ3B726 338 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC1-205ENST00000572656 TTLL5Q6EMB2 1281 aa12.64□□□□□ -0.39
TRAPPC1-205ENST00000572656 PAPPA2Q9BXP8 1791 aa12.64□□□□□ -0.39
TRAPPC1-205ENST00000572656 SASH1O94885 1247 aa12.63□□□□□ -0.39
TRAPPC1-205ENST00000572656 TBC1D8O95759 1140 aa12.63□□□□□ -0.39
TRAPPC1-205ENST00000572656 CSF1RP07333 972 aa12.63□□□□□ -0.39
TRAPPC1-205ENST00000572656 ITGA6P23229 1130 aa12.63□□□□□ -0.39
TRAPPC1-205ENST00000572656 PKN2Q16513 984 aaKnown RBP12.63□□□□□ -0.39
TRAPPC1-205ENST00000572656 WWC1Q8IX03 1113 aa12.63□□□□□ -0.39
TRAPPC1-205ENST00000572656 MPHOSPH8Q99549 860 aa12.63□□□□□ -0.39
TRAPPC1-205ENST00000572656 HDAC9Q9UKV0 1011 aa12.63□□□□□ -0.39
TRAPPC1-205ENST00000572656 KLRK1P26718 216 aa12.62□□□□□ -0.39
TRAPPC1-205ENST00000572656 CASP7P55210 303 aa12.62□□□□□ -0.39
TRAPPC1-205ENST00000572656 FLIIQ13045 1269 aa12.62□□□□□ -0.39
TRAPPC1-205ENST00000572656 NOM1Q5C9Z4 860 aaKnown RBP12.62□□□□□ -0.39
TRAPPC1-205ENST00000572656 ARMC9Q7Z3E5 817 aa12.62□□□□□ -0.39
TRAPPC1-205ENST00000572656 APOBEC3FQ8IUX4 373 aaKnown RBP12.62□□□□□ -0.39
TRAPPC1-205ENST00000572656 KIAA0825Q8IV33 1275 aa12.62□□□□□ -0.39
TRAPPC1-205ENST00000572656 ZNF296Q8WUU4 475 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC1-205ENST00000572656 ZBED3Q96IU2 234 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC1-205ENST00000572656 MYH16Q9H6N6 1097 aa12.62□□□□□ -0.39
TRAPPC1-205ENST00000572656 HPS5Q9UPZ3 1129 aa12.62□□□□□ -0.39
TRAPPC1-205ENST00000572656 IL16Q14005 1332 aa12.62□□□□□ -0.39
TRAPPC1-205ENST00000572656 KCNJ4P48050 445 aa12.61□□□□□ -0.39
TRAPPC1-205ENST00000572656 GTF2IP78347 998 aa12.61□□□□□ -0.39
TRAPPC1-205ENST00000572656 PTPN12Q05209 780 aaKnown RBP12.61□□□□□ -0.39
TRAPPC1-205ENST00000572656 CHRNDQ07001 517 aa12.61□□□□□ -0.39
TRAPPC1-205ENST00000572656 SREBF2Q12772 1141 aa12.61□□□□□ -0.39
TRAPPC1-205ENST00000572656 LINS1Q8NG48 757 aa12.61□□□□□ -0.39
TRAPPC1-205ENST00000572656 GPR25O00155 361 aa12.6□□□□□ -0.39
TRAPPC1-205ENST00000572656 MKRN3Q13064 507 aaKnown RBP12.6□□□□□ -0.39
TRAPPC1-205ENST00000572656 FKBP5Q13451 457 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC1-205ENST00000572656 NCBP3Q53F19 620 aaKnown RBP12.6□□□□□ -0.39
TRAPPC1-205ENST00000572656 LDLRAD1Q5T700 205 aa12.6□□□□□ -0.39
TRAPPC1-205ENST00000572656 DNAAF4Q8WXU2 420 aa12.6□□□□□ -0.39
TRAPPC1-205ENST00000572656 CFHR5Q9BXR6 569 aa12.6□□□□□ -0.39
TRAPPC1-205ENST00000572656 CD209Q9NNX6 404 aa12.6□□□□□ -0.39
TRAPPC1-205ENST00000572656 ANKRD18BA2A2Z9 1011 aa12.59□□□□□ -0.39
TRAPPC1-205ENST00000572656 PRKG1Q13976 671 aa12.59□□□□□ -0.39
TRAPPC1-205ENST00000572656 DLGAP5Q15398 846 aa12.59□□□□□ -0.39
TRAPPC1-205ENST00000572656 CCDC184Q52MB2 194 aa12.59□□□□□ -0.39
TRAPPC1-205ENST00000572656 SPRYD7Q5W111 196 aa12.59□□□□□ -0.39
TRAPPC1-205ENST00000572656 C15orf52Q6ZUT6 534 aaKnown RBP12.59□□□□□ -0.39
TRAPPC1-205ENST00000572656 DEFB129Q9H1M3 183 aa12.59□□□□□ -0.39
TRAPPC1-205ENST00000572656 POLR2AP24928 1970 aaKnown RBP12.59□□□□□ -0.39
TRAPPC1-205ENST00000572656 TNRC18O15417 2968 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC1-205ENST00000572656 PSME4Q14997 1843 aa12.58□□□□□ -0.4
TRAPPC1-205ENST00000572656 MTMR14Q8NCE2 650 aa12.58□□□□□ -0.4
TRAPPC1-205ENST00000572656 ANGEL1Q9UNK9 670 aaKnown RBP12.58□□□□□ -0.4
TRAPPC1-205ENST00000572656 IRS2Q9Y4H2 1338 aa12.58□□□□□ -0.4
TRAPPC1-205ENST00000572656 SNAP23O00161 211 aa12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 FKTNO75072 461 aa12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 VAMP4O75379 141 aa12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 TAF5LO75529 589 aa12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 ALDH1A1P00352 501 aa12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 IL1R1P14778 569 aa12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 INHBEP58166 350 aa12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 FOXO4P98177 505 aa12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 IFIT5Q13325 482 aaKnown RBP12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 MAP3K11Q16584 847 aa12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 FBXO46Q6PJ61 603 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 CERS5Q8N5B7 392 aa12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 HELBQ8NG08 1087 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 SLC10A4Q96EP9 437 aa12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 PPP2R3BQ9Y5P8 575 aa12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 COL1A1P02452 1464 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC1-205ENST00000572656 FANCIQ9NVI1 1328 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms