RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 HDAC1Q13547 482 aaPredicted RBP27.3■■□□□ 1.96
RAB40B-207ENST00000572603 ATP2B3Q16720 1220 aa27.3■■□□□ 1.96
RAB40B-207ENST00000572603 ZC3H12CQ9C0D7 883 aaKnown RBP27.29■■□□□ 1.96
RAB40B-207ENST00000572603 DCTPP1Q9H773 170 aa27.29■■□□□ 1.96
RAB40B-207ENST00000572603 ZC3H4Q9UPT8 1303 aaKnown RBP27.28■■□□□ 1.96
RAB40B-207ENST00000572603 HSP90AB4PQ58FF6 505 aa27.27■■□□□ 1.96
RAB40B-207ENST00000572603 ERC1Q8IUD2 1116 aa27.27■■□□□ 1.96
RAB40B-207ENST00000572603 NIM1KQ8IY84 436 aa27.27■■□□□ 1.96
RAB40B-207ENST00000572603 LPIN2Q92539 896 aa27.27■■□□□ 1.96
RAB40B-207ENST00000572603 DBNDD1Q9H9R9 158 aa27.27■■□□□ 1.96
RAB40B-207ENST00000572603 YDJCA8MPS7 323 aa27.26■■□□□ 1.95
RAB40B-207ENST00000572603 FZD9O00144 591 aa27.26■■□□□ 1.95
RAB40B-207ENST00000572603 DOK7Q18PE1 504 aa27.26■■□□□ 1.95
RAB40B-207ENST00000572603 RHPN1Q8TCX5 695 aa27.26■■□□□ 1.95
RAB40B-207ENST00000572603 GPR108Q9NPR9 543 aa27.26■■□□□ 1.95
RAB40B-207ENST00000572603 ZNF541Q9H0D2 1346 aa27.25■■□□□ 1.95
RAB40B-207ENST00000572603 ECE2O60344 883 aa27.25■■□□□ 1.95
RAB40B-207ENST00000572603 RAB11FIP3O75154 756 aa27.25■■□□□ 1.95
RAB40B-207ENST00000572603 SLC5A1P13866 664 aa27.25■■□□□ 1.95
RAB40B-207ENST00000572603 TNNI3KQ59H18 835 aa27.25■■□□□ 1.95
RAB40B-207ENST00000572603 JDP2Q8WYK2 163 aa27.25■■□□□ 1.95
RAB40B-207ENST00000572603 FPGT-TNNI3KV9GXZ4 949 aa27.25■■□□□ 1.95
RAB40B-207ENST00000572603 A0A1B0GUL7 405 aa27.24■■□□□ 1.95
RAB40B-207ENST00000572603 IFIT1P09914 478 aaKnown RBP27.24■■□□□ 1.95
RAB40B-207ENST00000572603 ADORA1P30542 326 aa27.24■■□□□ 1.95
RAB40B-207ENST00000572603 GYG1P46976 350 aa27.24■■□□□ 1.95
RAB40B-207ENST00000572603 KIF1BPQ96EK5 621 aa27.24■■□□□ 1.95
RAB40B-207ENST00000572603 FAM84BQ96KN1 310 aaPredicted RBP27.24■■□□□ 1.95
RAB40B-207ENST00000572603 ZNRF3Q9ULT6 936 aa27.24■■□□□ 1.95
RAB40B-207ENST00000572603 AKAP2Q9Y2D5 859 aa27.24■■□□□ 1.95
RAB40B-207ENST00000572603 IGHDP01880 384 aa27.23■■□□□ 1.95
RAB40B-207ENST00000572603 TIMM10P62072 90 aa27.23■■□□□ 1.95
RAB40B-207ENST00000572603 FBXO33Q7Z6M2 555 aa27.23■■□□□ 1.95
RAB40B-207ENST00000572603 COA1Q9GZY4 146 aa27.23■■□□□ 1.95
RAB40B-207ENST00000572603 APBB1O00213 710 aa27.22■■□□□ 1.95
RAB40B-207ENST00000572603 CD209Q9NNX6 404 aa27.22■■□□□ 1.95
RAB40B-207ENST00000572603 NEFLP07196 543 aa27.21■■□□□ 1.95
RAB40B-207ENST00000572603 ZNF804AQ7Z570 1209 aa27.21■■□□□ 1.95
RAB40B-207ENST00000572603 EAF2Q96CJ1 260 aaPredicted RBP27.21■■□□□ 1.95
RAB40B-207ENST00000572603 IL1RAPL2Q9NP60 686 aa27.21■■□□□ 1.95
RAB40B-207ENST00000572603 COL1A1P02452 1464 aaPredicted RBP27.2■■□□□ 1.95
RAB40B-207ENST00000572603 IL1R1P14778 569 aa27.2■■□□□ 1.94
RAB40B-207ENST00000572603 KCNQ5Q9NR82 932 aa27.2■■□□□ 1.94
RAB40B-207ENST00000572603 WDR90Q96KV7 1748 aa27.19■■□□□ 1.94
RAB40B-207ENST00000572603 HIBADHP31937 336 aaKnown RBP27.19■■□□□ 1.94
RAB40B-207ENST00000572603 BCAMP50895 628 aa27.19■■□□□ 1.94
RAB40B-207ENST00000572603 PODNQ7Z5L7 613 aa27.19■■□□□ 1.94
RAB40B-207ENST00000572603 XAGE2Q96GT9 111 aa27.19■■□□□ 1.94
RAB40B-207ENST00000572603 RWDD1Q9H446 243 aaPredicted RBP27.19■■□□□ 1.94
RAB40B-207ENST00000572603 TLR7Q9NYK1 1049 aaKnown RBP27.19■■□□□ 1.94
RAB40B-207ENST00000572603 AKAP11Q9UKA4 1901 aa27.19■■□□□ 1.94
RAB40B-207ENST00000572603 CXCL9Q07325 125 aa27.18■■□□□ 1.94
RAB40B-207ENST00000572603 SMC5Q8IY18 1101 aa27.18■■□□□ 1.94
RAB40B-207ENST00000572603 TDRD7Q8NHU6 1098 aaKnown RBP27.18■■□□□ 1.94
RAB40B-207ENST00000572603 DBNDD2Q9BQY9 259 aa27.18■■□□□ 1.94
RAB40B-207ENST00000572603 LRRCC1Q9C099 1032 aa27.18■■□□□ 1.94
RAB40B-207ENST00000572603 DBNLQ9UJU6 430 aaKnown RBP27.18■■□□□ 1.94
RAB40B-207ENST00000572603 SMARCA5O60264 1052 aaPredicted RBP27.17■■□□□ 1.94
RAB40B-207ENST00000572603 PHKA1P46020 1223 aa27.17■■□□□ 1.94
RAB40B-207ENST00000572603 GCC1Q96CN9 775 aa27.17■■□□□ 1.94
RAB40B-207ENST00000572603 G3V3G9 751 aa27.16■■□□□ 1.94
RAB40B-207ENST00000572603 RAD17O75943 681 aa27.16■■□□□ 1.94
RAB40B-207ENST00000572603 EIF6P56537 245 aaKnown RBP27.16■■□□□ 1.94
RAB40B-207ENST00000572603 CAVIN4Q5BKX8 364 aa27.16■■□□□ 1.94
RAB40B-207ENST00000572603 DCAF8Q5TAQ9 597 aa27.16■■□□□ 1.94
RAB40B-207ENST00000572603 NEUROD6Q96NK8 337 aa27.16■■□□□ 1.94
RAB40B-207ENST00000572603 ZBTB22O15209 634 aa27.15■■□□□ 1.94
RAB40B-207ENST00000572603 CCDC102BQ68D86 513 aa27.15■■□□□ 1.94
RAB40B-207ENST00000572603 AACSQ86V21 672 aa27.15■■□□□ 1.94
RAB40B-207ENST00000572603 CCDC8Q9H0W5 538 aaPredicted RBP27.15■■□□□ 1.94
RAB40B-207ENST00000572603 CIAPIN1Q6FI81 312 aa27.14■■□□□ 1.94
RAB40B-207ENST00000572603 CLASRPQ8N2M8 674 aaKnown RBP27.14■■□□□ 1.94
RAB40B-207ENST00000572603 IQSEC3Q9UPP2 1182 aaPredicted RBP27.14■■□□□ 1.94
RAB40B-207ENST00000572603 GLTPD2A6NH11 291 aa27.13■■□□□ 1.93
RAB40B-207ENST00000572603 PSMD14O00487 310 aa27.13■■□□□ 1.93
RAB40B-207ENST00000572603 SCN4AP35499 1836 aa27.13■■□□□ 1.93
RAB40B-207ENST00000572603 FAM205AQ6ZU69 1335 aa27.13■■□□□ 1.93
RAB40B-207ENST00000572603 DDNO94850 711 aaPredicted RBP27.12■■□□□ 1.93
RAB40B-207ENST00000572603 DACT2Q5SW24 774 aa27.12■■□□□ 1.93
RAB40B-207ENST00000572603 VPS37DQ86XT2 251 aa27.12■■□□□ 1.93
RAB40B-207ENST00000572603 GPC2Q8N158 579 aa27.12■■□□□ 1.93
RAB40B-207ENST00000572603 USP17L3A6NCW0 530 aa27.11■■□□□ 1.93
RAB40B-207ENST00000572603 USP17L4A6NCW7 530 aa27.11■■□□□ 1.93
RAB40B-207ENST00000572603 ARID4AP29374 1257 aaPredicted RBP27.11■■□□□ 1.93
RAB40B-207ENST00000572603 STRIP1Q5VSL9 837 aa27.11■■□□□ 1.93
RAB40B-207ENST00000572603 USP17L1Q7RTZ2 530 aa27.11■■□□□ 1.93
RAB40B-207ENST00000572603 VIL1P09327 827 aaKnown RBP27.1■■□□□ 1.93
RAB40B-207ENST00000572603 GTF2IP78347 998 aa27.1■■□□□ 1.93
RAB40B-207ENST00000572603 TNIP1Q15025 636 aa27.1■■□□□ 1.93
RAB40B-207ENST00000572603 YY1P25490 414 aa27.09■■□□□ 1.93
RAB40B-207ENST00000572603 RASGRF1Q13972 1273 aa27.09■■□□□ 1.93
RAB40B-207ENST00000572603 L3MBTL3Q96JM7 780 aaPredicted RBP27.09■■□□□ 1.93
RAB40B-207ENST00000572603 MXD3Q9BW11 206 aa27.09■■□□□ 1.93
RAB40B-207ENST00000572603 JAG2Q9Y219 1238 aa27.09■■□□□ 1.93
RAB40B-207ENST00000572603 GJA3Q9Y6H8 435 aa27.09■■□□□ 1.93
RAB40B-207ENST00000572603 KDM2BQ8NHM5 1336 aa27.09■■□□□ 1.93
RAB40B-207ENST00000572603 SEMA3EO15041 775 aa27.08■■□□□ 1.93
RAB40B-207ENST00000572603 SCARF1Q14162 830 aa27.08■■□□□ 1.93
RAB40B-207ENST00000572603 RSBN1LQ6PCB5 846 aaPredicted RBP27.08■■□□□ 1.93
RAB40B-207ENST00000572603 CERS5Q8N5B7 392 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms