RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 SPRYD7Q5W111 196 aa14.7□□□□□ -0.06
CHMP6-202ENST00000571457 APOBEC3FQ8IUX4 373 aaKnown RBP14.7□□□□□ -0.06
CHMP6-202ENST00000571457 TRIM17Q9Y577 477 aa14.7□□□□□ -0.06
CHMP6-202ENST00000571457 MED23Q9ULK4 1368 aa14.7□□□□□ -0.06
CHMP6-202ENST00000571457 NEUROD2Q15784 382 aa14.69□□□□□ -0.06
CHMP6-202ENST00000571457 DACT2Q5SW24 774 aa14.69□□□□□ -0.06
CHMP6-202ENST00000571457 LDLRAD1Q5T700 205 aa14.69□□□□□ -0.06
CHMP6-202ENST00000571457 STRIP1Q5VSL9 837 aa14.69□□□□□ -0.06
CHMP6-202ENST00000571457 CDC5LQ99459 802 aaKnown RBP14.69□□□□□ -0.06
CHMP6-202ENST00000571457 R3HDMLQ9H3Y0 253 aa14.69□□□□□ -0.06
CHMP6-202ENST00000571457 PRKG1Q13976 671 aa14.68□□□□□ -0.06
CHMP6-202ENST00000571457 DUSP27Q5VZP5 1158 aa14.68□□□□□ -0.06
CHMP6-202ENST00000571457 OTOP1Q7RTM1 612 aa14.68□□□□□ -0.06
CHMP6-202ENST00000571457 FBXW7Q969H0 707 aa14.68□□□□□ -0.06
CHMP6-202ENST00000571457 SLC10A4Q96EP9 437 aa14.68□□□□□ -0.06
CHMP6-202ENST00000571457 ERO1AQ96HE7 468 aa14.68□□□□□ -0.06
CHMP6-202ENST00000571457 CWC25Q9NXE8 425 aaPredicted RBP14.68□□□□□ -0.06
CHMP6-202ENST00000571457 TRIOBPQ9H2D6 2365 aa14.67□□□□□ -0.06
CHMP6-202ENST00000571457 ZBTB48P10074 688 aaPredicted RBP14.67□□□□□ -0.06
CHMP6-202ENST00000571457 IFNL1Q8IU54 200 aa14.67□□□□□ -0.06
CHMP6-202ENST00000571457 CCDC85AQ96PX6 553 aaPredicted RBP14.67□□□□□ -0.06
CHMP6-202ENST00000571457 MYD88Q99836 296 aa14.67□□□□□ -0.06
CHMP6-202ENST00000571457 COA1Q9GZY4 146 aa14.67□□□□□ -0.06
CHMP6-202ENST00000571457 ANGEL1Q9UNK9 670 aaKnown RBP14.67□□□□□ -0.06
CHMP6-202ENST00000571457 CENPFP49454 3210 aa14.66□□□□□ -0.06
CHMP6-202ENST00000571457 POTEFA5A3E0 1075 aa14.66□□□□□ -0.06
CHMP6-202ENST00000571457 UNCXA6NJT0 531 aa14.66□□□□□ -0.06
CHMP6-202ENST00000571457 SASH1O94885 1247 aa14.66□□□□□ -0.06
CHMP6-202ENST00000571457 OTUD7BQ6GQQ9 843 aa14.66□□□□□ -0.06
CHMP6-202ENST00000571457 BSDC1Q9NW68 430 aaPredicted RBP14.66□□□□□ -0.06
CHMP6-202ENST00000571457 COL1A1P02452 1464 aaPredicted RBP14.65□□□□□ -0.06
CHMP6-202ENST00000571457 PPP1R12BO60237 982 aaPredicted RBP14.65□□□□□ -0.06
CHMP6-202ENST00000571457 CCT4P50991 539 aaKnown RBP14.65□□□□□ -0.06
CHMP6-202ENST00000571457 MXD3Q9BW11 206 aa14.65□□□□□ -0.06
CHMP6-202ENST00000571457 CHMP4AQ9BY43 222 aa14.65□□□□□ -0.06
CHMP6-202ENST00000571457 MINPP1Q9UNW1 487 aa14.65□□□□□ -0.06
CHMP6-202ENST00000571457 TRIM35Q9UPQ4 493 aa14.65□□□□□ -0.06
CHMP6-202ENST00000571457 DDX58O95786 925 aaKnown RBP14.64□□□□□ -0.07
CHMP6-202ENST00000571457 CTSWP56202 376 aa14.64□□□□□ -0.07
CHMP6-202ENST00000571457 MAP3K11Q16584 847 aa14.64□□□□□ -0.07
CHMP6-202ENST00000571457 TTLL5Q6EMB2 1281 aa14.64□□□□□ -0.07
CHMP6-202ENST00000571457 ARMC5Q96C12 935 aa14.64□□□□□ -0.07
CHMP6-202ENST00000571457 DEFB129Q9H1M3 183 aa14.64□□□□□ -0.07
CHMP6-202ENST00000571457 PTPN22Q9Y2R2 807 aa14.64□□□□□ -0.07
CHMP6-202ENST00000571457 LEMD3Q9Y2U8 911 aa14.64□□□□□ -0.07
CHMP6-202ENST00000571457 RBBP6Q7Z6E9 1792 aaKnown RBP14.63□□□□□ -0.07
CHMP6-202ENST00000571457 FXR1P51114 621 aaKnown RBP eCLIP14.63□□□□□ -0.07
CHMP6-202ENST00000571457 RALBP1Q15311 655 aa14.63□□□□□ -0.07
CHMP6-202ENST00000571457 KIAA0825Q8IV33 1275 aa14.63□□□□□ -0.07
CHMP6-202ENST00000571457 CCDC146Q8IYE0 955 aa14.63□□□□□ -0.07
CHMP6-202ENST00000571457 JARID2Q92833 1246 aaPredicted RBP14.63□□□□□ -0.07
CHMP6-202ENST00000571457 RUNDC1Q96C34 613 aa14.63□□□□□ -0.07
CHMP6-202ENST00000571457 METTL22Q9BUU2 404 aaPredicted RBP14.63□□□□□ -0.07
CHMP6-202ENST00000571457 TMEM106CQ9BVX2 250 aa14.63□□□□□ -0.07
CHMP6-202ENST00000571457 PHAXQ9H814 394 aaKnown RBP14.63□□□□□ -0.07
CHMP6-202ENST00000571457 EFCC1Q9HA90 598 aa14.63□□□□□ -0.07
CHMP6-202ENST00000571457 PPP2R3BQ9Y5P8 575 aa14.63□□□□□ -0.07
CHMP6-202ENST00000571457 WTIPA6NIX2 430 aaPredicted RBP14.62□□□□□ -0.07
CHMP6-202ENST00000571457 IGF2BP3O00425 579 aaKnown RBP eCLIP14.62□□□□□ -0.07
CHMP6-202ENST00000571457 ARHGEF6Q15052 776 aa14.62□□□□□ -0.07
CHMP6-202ENST00000571457 DLGAP5Q15398 846 aa14.62□□□□□ -0.07
CHMP6-202ENST00000571457 SUPT20HL1Q3ZLR7 823 aa14.62□□□□□ -0.07
CHMP6-202ENST00000571457 ZBED3Q96IU2 234 aaPredicted RBP14.62□□□□□ -0.07
CHMP6-202ENST00000571457 WNK4Q96J92 1243 aa14.62□□□□□ -0.07
CHMP6-202ENST00000571457 MBIPQ9NS73 344 aa14.62□□□□□ -0.07
CHMP6-202ENST00000571457 EN2P19622 333 aaPredicted RBP14.61□□□□□ -0.07
CHMP6-202ENST00000571457 TTLL11Q8NHH1 800 aa14.61□□□□□ -0.07
CHMP6-202ENST00000571457 CD99L2Q8TCZ2 262 aa14.61□□□□□ -0.07
CHMP6-202ENST00000571457 ANKRD2Q9GZV1 360 aa14.61□□□□□ -0.07
CHMP6-202ENST00000571457 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.61□□□□□ -0.07
CHMP6-202ENST00000571457 BRCA2P51587 3418 aa14.6□□□□□ -0.07
CHMP6-202ENST00000571457 MYO1BO43795 1136 aa14.6□□□□□ -0.07
CHMP6-202ENST00000571457 IGHMBP2P38935 993 aaKnown RBP14.6□□□□□ -0.07
CHMP6-202ENST00000571457 IREB2P48200 963 aaKnown RBP14.6□□□□□ -0.07
CHMP6-202ENST00000571457 GTF2IP78347 998 aa14.6□□□□□ -0.07
CHMP6-202ENST00000571457 SP3Q02447 781 aa14.6□□□□□ -0.07
CHMP6-202ENST00000571457 CRHR2Q13324 411 aa14.6□□□□□ -0.07
CHMP6-202ENST00000571457 WDR43Q15061 677 aaKnown RBP eCLIP14.6□□□□□ -0.07
CHMP6-202ENST00000571457 NBPF11Q86T75 865 aa14.6□□□□□ -0.07
CHMP6-202ENST00000571457 CLMNQ96JQ2 1002 aa14.6□□□□□ -0.07
CHMP6-202ENST00000571457 GREM2Q9H772 168 aa14.6□□□□□ -0.07
CHMP6-202ENST00000571457 ZNF804BA4D1E1 1349 aa14.6□□□□□ -0.07
CHMP6-202ENST00000571457 ZNF646O15015 1829 aaPredicted RBP14.59□□□□□ -0.07
CHMP6-202ENST00000571457 CUL9Q8IWT3 2517 aa14.59□□□□□ -0.07
CHMP6-202ENST00000571457 CALD1Q05682 793 aaKnown RBP14.59□□□□□ -0.07
CHMP6-202ENST00000571457 NEXNQ0ZGT2 675 aa14.59□□□□□ -0.07
CHMP6-202ENST00000571457 TXNRD3Q86VQ6 643 aa14.59□□□□□ -0.07
CHMP6-202ENST00000571457 MTMR14Q8NCE2 650 aa14.59□□□□□ -0.07
CHMP6-202ENST00000571457 FZD1Q9UP38 647 aa14.59□□□□□ -0.07
CHMP6-202ENST00000571457 KCNJ4P48050 445 aa14.58□□□□□ -0.08
CHMP6-202ENST00000571457 CCDC30Q5VVM6 783 aa14.58□□□□□ -0.08
CHMP6-202ENST00000571457 MAP3K2Q9Y2U5 619 aa14.58□□□□□ -0.08
CHMP6-202ENST00000571457 MYH3P11055 1940 aa14.58□□□□□ -0.08
CHMP6-202ENST00000571457 LAMB1P07942 1786 aa14.57□□□□□ -0.08
CHMP6-202ENST00000571457 ELL2O00472 640 aaPredicted RBP14.57□□□□□ -0.08
CHMP6-202ENST00000571457 ZNF853P0CG23 659 aa14.57□□□□□ -0.08
CHMP6-202ENST00000571457 GNAI1P63096 354 aa14.57□□□□□ -0.08
CHMP6-202ENST00000571457 SLC9C1Q4G0N8 1177 aa14.57□□□□□ -0.08
CHMP6-202ENST00000571457 KSR2Q6VAB6 950 aa14.57□□□□□ -0.08
CHMP6-202ENST00000571457 ANKRD13AQ8IZ07 590 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms