RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 FGFR2P21802 821 aa8.72□□□□□ -1.01
SMG6-209ENST00000571442 METTL24Q5JXM2 366 aa8.72□□□□□ -1.01
SMG6-209ENST00000571442 SSH3Q8TE77 659 aa8.72□□□□□ -1.01
SMG6-209ENST00000571442 CRBNQ96SW2 442 aa8.72□□□□□ -1.01
SMG6-209ENST00000571442 EYA3Q99504 573 aa8.72□□□□□ -1.01
SMG6-209ENST00000571442 ZC3H12CQ9C0D7 883 aaKnown RBP8.72□□□□□ -1.01
SMG6-209ENST00000571442 SCN4AP35499 1836 aa8.72□□□□□ -1.01
SMG6-209ENST00000571442 KDM2BQ8NHM5 1336 aa8.72□□□□□ -1.01
SMG6-209ENST00000571442 ARAP2Q8WZ64 1704 aa8.71□□□□□ -1.01
SMG6-209ENST00000571442 ADAMTSL1Q8N6G6 1762 aa8.71□□□□□ -1.01
SMG6-209ENST00000571442 CIAO1O76071 339 aa8.71□□□□□ -1.02
SMG6-209ENST00000571442 SASH1O94885 1247 aa8.71□□□□□ -1.02
SMG6-209ENST00000571442 PDE8BO95263 885 aa8.71□□□□□ -1.02
SMG6-209ENST00000571442 EPS15P42566 896 aa8.71□□□□□ -1.02
SMG6-209ENST00000571442 GYG1P46976 350 aa8.71□□□□□ -1.02
SMG6-209ENST00000571442 GMPSP49915 693 aaPredicted RBP8.71□□□□□ -1.02
SMG6-209ENST00000571442 EIF6P56537 245 aaKnown RBP8.71□□□□□ -1.02
SMG6-209ENST00000571442 CIAPIN1Q6FI81 312 aa8.71□□□□□ -1.02
SMG6-209ENST00000571442 C15orf52Q6ZUT6 534 aaKnown RBP8.71□□□□□ -1.02
SMG6-209ENST00000571442 L3MBTL3Q96JM7 780 aaPredicted RBP8.71□□□□□ -1.02
SMG6-209ENST00000571442 CD209Q9NNX6 404 aa8.71□□□□□ -1.02
SMG6-209ENST00000571442 DDX19BQ9UMR2 479 aa8.71□□□□□ -1.02
SMG6-209ENST00000571442 JAG2Q9Y219 1238 aa8.71□□□□□ -1.02
SMG6-209ENST00000571442 MROH5Q6ZUA9 1318 aa8.71□□□□□ -1.02
SMG6-209ENST00000571442 COL1A1P02452 1464 aaPredicted RBP8.7□□□□□ -1.02
SMG6-209ENST00000571442 EGFRP00533 1210 aa8.7□□□□□ -1.02
SMG6-209ENST00000571442 MS4A1P11836 297 aa8.7□□□□□ -1.02
SMG6-209ENST00000571442 ADORA1P30542 326 aa8.7□□□□□ -1.02
SMG6-209ENST00000571442 KCNJ4P48050 445 aa8.7□□□□□ -1.02
SMG6-209ENST00000571442 TFCP2Q12800 502 aa8.7□□□□□ -1.02
SMG6-209ENST00000571442 UBE4AQ14139 1066 aa8.7□□□□□ -1.02
SMG6-209ENST00000571442 IFFO2Q5TF58 517 aa8.7□□□□□ -1.02
SMG6-209ENST00000571442 DPY19L2Q6NUT2 758 aa8.7□□□□□ -1.02
SMG6-209ENST00000571442 GPC2Q8N158 579 aa8.7□□□□□ -1.02
SMG6-209ENST00000571442 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.7□□□□□ -1.02
SMG6-209ENST00000571442 RBM46Q8TBY0 533 aaKnown RBP8.7□□□□□ -1.02
SMG6-209ENST00000571442 FAM84BQ96KN1 310 aaPredicted RBP8.7□□□□□ -1.02
SMG6-209ENST00000571442 SUPT16HQ9Y5B9 1047 aaKnown RBP8.7□□□□□ -1.02
SMG6-209ENST00000571442 VIL1P09327 827 aaKnown RBP8.69□□□□□ -1.02
SMG6-209ENST00000571442 IL1R1P14778 569 aa8.69□□□□□ -1.02
SMG6-209ENST00000571442 VEGFAP15692 232 aaPredicted RBP8.69□□□□□ -1.02
SMG6-209ENST00000571442 IL15P40933 162 aaPredicted RBP8.69□□□□□ -1.02
SMG6-209ENST00000571442 BCAMP50895 628 aa8.69□□□□□ -1.02
SMG6-209ENST00000571442 GRIK5Q16478 980 aa8.69□□□□□ -1.02
SMG6-209ENST00000571442 DACT2Q5SW24 774 aa8.69□□□□□ -1.02
SMG6-209ENST00000571442 FBXO33Q7Z6M2 555 aa8.69□□□□□ -1.02
SMG6-209ENST00000571442 CERS5Q8N5B7 392 aa8.69□□□□□ -1.02
SMG6-209ENST00000571442 TRPM4Q8TD43 1214 aa8.69□□□□□ -1.02
SMG6-209ENST00000571442 GMLQ99445 158 aa8.69□□□□□ -1.02
SMG6-209ENST00000571442 COA1Q9GZY4 146 aa8.69□□□□□ -1.02
SMG6-209ENST00000571442 TAF1DQ9H5J8 278 aaPredicted RBP8.69□□□□□ -1.02
SMG6-209ENST00000571442 GPRC5DQ9NZD1 345 aa8.69□□□□□ -1.02
SMG6-209ENST00000571442 FBXO3Q9UK99 471 aa8.69□□□□□ -1.02
SMG6-209ENST00000571442 IQSEC3Q9UPP2 1182 aaPredicted RBP8.69□□□□□ -1.02
SMG6-209ENST00000571442 HDAC5Q9UQL6 1122 aa8.69□□□□□ -1.02
SMG6-209ENST00000571442 PCDHB15Q9Y5E8 787 aa8.69□□□□□ -1.02
SMG6-209ENST00000571442 ZNF609O15014 1411 aa8.69□□□□□ -1.02
SMG6-209ENST00000571442 MYH13Q9UKX3 1938 aa8.68□□□□□ -1.02
SMG6-209ENST00000571442 SURF6O75683 361 aaKnown RBP8.68□□□□□ -1.02
SMG6-209ENST00000571442 EPHX2P34913 555 aa8.68□□□□□ -1.02
SMG6-209ENST00000571442 HIRAP54198 1017 aaPredicted RBP8.68□□□□□ -1.02
SMG6-209ENST00000571442 TIMM10P62072 90 aa8.68□□□□□ -1.02
SMG6-209ENST00000571442 GTF2IP78347 998 aa8.68□□□□□ -1.02
SMG6-209ENST00000571442 IRX6P78412 446 aaPredicted RBP8.68□□□□□ -1.02
SMG6-209ENST00000571442 PUM3Q15397 648 aaKnown RBP8.68□□□□□ -1.02
SMG6-209ENST00000571442 RSBN1LQ6PCB5 846 aaPredicted RBP8.68□□□□□ -1.02
SMG6-209ENST00000571442 PODNQ7Z5L7 613 aa8.68□□□□□ -1.02
SMG6-209ENST00000571442 TDRD7Q8NHU6 1098 aaKnown RBP8.68□□□□□ -1.02
SMG6-209ENST00000571442 CEP126Q9P2H0 1117 aa8.68□□□□□ -1.02
SMG6-209ENST00000571442 HACL1Q9UJ83 578 aa8.68□□□□□ -1.02
SMG6-209ENST00000571442 EXOC6BQ9Y2D4 811 aa8.68□□□□□ -1.02
SMG6-209ENST00000571442 NOP58Q9Y2X3 529 aaKnown RBP8.68□□□□□ -1.02
SMG6-209ENST00000571442 A0A1B0GUL7 405 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 USP17L3A6NCW0 530 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 USP17L4A6NCW7 530 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 G3V3G9 751 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 ASTN2O75129 1339 aaPredicted RBP8.67□□□□□ -1.02
SMG6-209ENST00000571442 POLR2AP24928 1970 aaKnown RBP8.67□□□□□ -1.02
SMG6-209ENST00000571442 HIBADHP31937 336 aaKnown RBP8.67□□□□□ -1.02
SMG6-209ENST00000571442 PHKA1P46020 1223 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 FSTL1Q12841 308 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 TNIP1Q15025 636 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 ATP2B3Q16720 1220 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 DCAF8Q5TAQ9 597 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 USP17L1Q7RTZ2 530 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 SAMD7Q7Z3H4 446 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 MICALL2Q8IY33 904 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 EXOC6Q8TAG9 804 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 LPIN2Q92539 896 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 FBXW7Q969H0 707 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 TLR7Q9NYK1 1049 aaKnown RBP8.67□□□□□ -1.02
SMG6-209ENST00000571442 CNOT7Q9UIV1 285 aaKnown RBP8.67□□□□□ -1.02
SMG6-209ENST00000571442 PCDHAC2Q9Y5I4 1007 aa8.67□□□□□ -1.02
SMG6-209ENST00000571442 AOX1Q06278 1338 aa8.66□□□□□ -1.02
SMG6-209ENST00000571442 IFIT1P09914 478 aaKnown RBP8.66□□□□□ -1.02
SMG6-209ENST00000571442 SLC5A1P13866 664 aa8.66□□□□□ -1.02
SMG6-209ENST00000571442 FMR1Q06787 632 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMG6-209ENST00000571442 G3BP1Q13283 466 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMG6-209ENST00000571442 EAPPQ56P03 285 aaPredicted RBP8.66□□□□□ -1.02
SMG6-209ENST00000571442 STRIP1Q5VSL9 837 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms