RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 F6X3S4 739 aa16.87■□□□□ 0.29
CCDC40-205ENST00000571028 GPR25O00155 361 aa16.87■□□□□ 0.29
CCDC40-205ENST00000571028 ALDH1L2Q3SY69 923 aa16.87■□□□□ 0.29
CCDC40-205ENST00000571028 KSR2Q6VAB6 950 aa16.87■□□□□ 0.29
CCDC40-205ENST00000571028 ANKIB1Q9P2G1 1089 aa16.87■□□□□ 0.29
CCDC40-205ENST00000571028 BCAR3O75815 825 aa16.86■□□□□ 0.29
CCDC40-205ENST00000571028 UFL1O94874 794 aa16.86■□□□□ 0.29
CCDC40-205ENST00000571028 NF2P35240 595 aa16.86■□□□□ 0.29
CCDC40-205ENST00000571028 SREBF2Q12772 1141 aa16.86■□□□□ 0.29
CCDC40-205ENST00000571028 SF3B3Q15393 1217 aaKnown RBP16.86■□□□□ 0.29
CCDC40-205ENST00000571028 RSBN1LQ6PCB5 846 aaPredicted RBP16.86■□□□□ 0.29
CCDC40-205ENST00000571028 AGBL3Q8NEM8 1001 aa16.86■□□□□ 0.29
CCDC40-205ENST00000571028 FRAT1Q92837 279 aaPredicted RBP16.86■□□□□ 0.29
CCDC40-205ENST00000571028 FAM89AQ96GI7 184 aa16.86■□□□□ 0.29
CCDC40-205ENST00000571028 PITPNM2Q9BZ72 1349 aa16.86■□□□□ 0.29
CCDC40-205ENST00000571028 PAPPA2Q9BXP8 1791 aa16.86■□□□□ 0.29
CCDC40-205ENST00000571028 DDX60Q8IY21 1712 aaKnown RBP16.85■□□□□ 0.29
CCDC40-205ENST00000571028 UBE2Q2LH0YL09 131 aa16.85■□□□□ 0.29
CCDC40-205ENST00000571028 FKTNO75072 461 aa16.85■□□□□ 0.29
CCDC40-205ENST00000571028 USP17L8P0C7I0 530 aa16.85■□□□□ 0.29
CCDC40-205ENST00000571028 ZNF280AP59817 542 aaPredicted RBP16.85■□□□□ 0.29
CCDC40-205ENST00000571028 MKRN3Q13064 507 aaKnown RBP16.85■□□□□ 0.29
CCDC40-205ENST00000571028 HABP4Q5JVS0 413 aaKnown RBP16.85■□□□□ 0.29
CCDC40-205ENST00000571028 SLC4A10Q6U841 1118 aa16.85■□□□□ 0.29
CCDC40-205ENST00000571028 MYOZ2Q9NPC6 264 aa16.85■□□□□ 0.29
CCDC40-205ENST00000571028 GGA1Q9UJY5 639 aa16.85■□□□□ 0.29
CCDC40-205ENST00000571028 NOB1Q9ULX3 412 aaKnown RBP16.85■□□□□ 0.29
CCDC40-205ENST00000571028 RPS8P62241 208 aaKnown RBP16.84■□□□□ 0.29
CCDC40-205ENST00000571028 NEXNQ0ZGT2 675 aa16.84■□□□□ 0.29
CCDC40-205ENST00000571028 NOM1Q5C9Z4 860 aaKnown RBP16.84■□□□□ 0.29
CCDC40-205ENST00000571028 RTL5Q5HYW3 569 aaPredicted RBP16.84■□□□□ 0.29
CCDC40-205ENST00000571028 MOB2Q70IA6 237 aa16.84■□□□□ 0.29
CCDC40-205ENST00000571028 DNAAF4Q8WXU2 420 aa16.84■□□□□ 0.29
CCDC40-205ENST00000571028 METTL22Q9BUU2 404 aaPredicted RBP16.84■□□□□ 0.29
CCDC40-205ENST00000571028 JARID2Q92833 1246 aaPredicted RBP16.83■□□□□ 0.28
CCDC40-205ENST00000571028 IRS4O14654 1257 aaPredicted RBP16.82■□□□□ 0.28
CCDC40-205ENST00000571028 HSP90B1P14625 803 aaKnown RBP16.82■□□□□ 0.28
CCDC40-205ENST00000571028 TM4SF4P48230 202 aa16.82■□□□□ 0.28
CCDC40-205ENST00000571028 CWF19L2Q2TBE0 894 aaKnown RBP16.82■□□□□ 0.28
CCDC40-205ENST00000571028 PODXL2Q9NZ53 605 aa16.82■□□□□ 0.28
CCDC40-205ENST00000571028 PRAMEF18Q5VWM3 479 aa16.81■□□□□ 0.28
CCDC40-205ENST00000571028 ISCA1Q9BUE6 129 aa16.81■□□□□ 0.28
CCDC40-205ENST00000571028 SCAF8Q9UPN6 1271 aaKnown RBP16.81■□□□□ 0.28
CCDC40-205ENST00000571028 ZNF609O15014 1411 aa16.8■□□□□ 0.28
CCDC40-205ENST00000571028 USP17L3A6NCW0 530 aa16.8■□□□□ 0.28
CCDC40-205ENST00000571028 USP17L4A6NCW7 530 aa16.8■□□□□ 0.28
CCDC40-205ENST00000571028 INTS3Q68E01 1043 aaKnown RBP16.8■□□□□ 0.28
CCDC40-205ENST00000571028 USP17L1Q7RTZ2 530 aa16.8■□□□□ 0.28
CCDC40-205ENST00000571028 ARMC9Q7Z3E5 817 aa16.8■□□□□ 0.28
CCDC40-205ENST00000571028 OGFOD1Q8N543 542 aa16.8■□□□□ 0.28
CCDC40-205ENST00000571028 RCAN3Q9UKA8 241 aa16.8■□□□□ 0.28
CCDC40-205ENST00000571028 TAF1P21675 1872 aa16.8■□□□□ 0.28
CCDC40-205ENST00000571028 PTPRCP08575 1304 aa16.79■□□□□ 0.28
CCDC40-205ENST00000571028 ALDH1A1P00352 501 aa16.79■□□□□ 0.28
CCDC40-205ENST00000571028 IGKV5-2P06315 115 aa16.79■□□□□ 0.28
CCDC40-205ENST00000571028 CWC25Q9NXE8 425 aaPredicted RBP16.79■□□□□ 0.28
CCDC40-205ENST00000571028 TRIM17Q9Y577 477 aa16.79■□□□□ 0.28
CCDC40-205ENST00000571028 POLR2AP24928 1970 aaKnown RBP16.78■□□□□ 0.28
CCDC40-205ENST00000571028 KIF16BQ96L93 1317 aa16.78■□□□□ 0.28
CCDC40-205ENST00000571028 IPO8O15397 1037 aaKnown RBP16.78■□□□□ 0.28
CCDC40-205ENST00000571028 FBXW7Q969H0 707 aa16.78■□□□□ 0.28
CCDC40-205ENST00000571028 CLUAP1Q96AJ1 413 aa16.78■□□□□ 0.28
CCDC40-205ENST00000571028 API5Q9BZZ5 524 aaKnown RBP16.78■□□□□ 0.28
CCDC40-205ENST00000571028 TNNQ9UQP3 1299 aa16.78■□□□□ 0.28
CCDC40-205ENST00000571028 NEURL1BA8MQ27 555 aa16.77■□□□□ 0.28
CCDC40-205ENST00000571028 PRKG1Q13976 671 aa16.77■□□□□ 0.28
CCDC40-205ENST00000571028 NBPF9Q3BBW0 867 aa16.77■□□□□ 0.28
CCDC40-205ENST00000571028 CCDC152Q4G0S7 254 aa16.77■□□□□ 0.28
CCDC40-205ENST00000571028 BEND3Q5T5X7 828 aa16.77■□□□□ 0.28
CCDC40-205ENST00000571028 PODNQ7Z5L7 613 aa16.77■□□□□ 0.28
CCDC40-205ENST00000571028 CCDC191Q8NCU4 936 aa16.77■□□□□ 0.28
CCDC40-205ENST00000571028 LINS1Q8NG48 757 aa16.77■□□□□ 0.28
CCDC40-205ENST00000571028 CFHR5Q9BXR6 569 aa16.77■□□□□ 0.28
CCDC40-205ENST00000571028 SEC31BQ9NQW1 1179 aa16.77■□□□□ 0.28
CCDC40-205ENST00000571028 XDHP47989 1333 aa16.76■□□□□ 0.27
CCDC40-205ENST00000571028 TRIM28Q13263 835 aaKnown RBP16.76■□□□□ 0.27
CCDC40-205ENST00000571028 GMLQ99445 158 aa16.76■□□□□ 0.27
CCDC40-205ENST00000571028 SRCIN1Q9C0H9 1055 aa16.76■□□□□ 0.27
CCDC40-205ENST00000571028 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.76■□□□□ 0.27
CCDC40-205ENST00000571028 POTEFA5A3E0 1075 aa16.75■□□□□ 0.27
CCDC40-205ENST00000571028 ATP2B4P23634 1241 aa16.75■□□□□ 0.27
CCDC40-205ENST00000571028 PTPN12Q05209 780 aaKnown RBP16.75■□□□□ 0.27
CCDC40-205ENST00000571028 ZKSCAN2Q63HK3 967 aa16.75■□□□□ 0.27
CCDC40-205ENST00000571028 ANKRD18AQ8IVF6 992 aa16.75■□□□□ 0.27
CCDC40-205ENST00000571028 ZBTB38Q8NAP3 1195 aaPredicted RBP16.75■□□□□ 0.27
CCDC40-205ENST00000571028 MYO3BQ8WXR4 1341 aa16.74■□□□□ 0.27
CCDC40-205ENST00000571028 PLIN1O60240 522 aa16.74■□□□□ 0.27
CCDC40-205ENST00000571028 GCKRQ14397 625 aa16.74■□□□□ 0.27
CCDC40-205ENST00000571028 SPRYD7Q5W111 196 aa16.74■□□□□ 0.27
CCDC40-205ENST00000571028 ATF7IPQ6VMQ6 1270 aa16.74■□□□□ 0.27
CCDC40-205ENST00000571028 OTOP1Q7RTM1 612 aa16.74■□□□□ 0.27
CCDC40-205ENST00000571028 UBE3BQ7Z3V4 1068 aa16.74■□□□□ 0.27
CCDC40-205ENST00000571028 APOBEC3FQ8IUX4 373 aaKnown RBP16.74■□□□□ 0.27
CCDC40-205ENST00000571028 CCDC85AQ96PX6 553 aaPredicted RBP16.74■□□□□ 0.27
CCDC40-205ENST00000571028 R3HDMLQ9H3Y0 253 aa16.74■□□□□ 0.27
CCDC40-205ENST00000571028 SCN9AQ15858 1988 aa16.74■□□□□ 0.27
CCDC40-205ENST00000571028 COL4A1P02462 1669 aa16.74■□□□□ 0.27
CCDC40-205ENST00000571028 CACNA1FO60840 1977 aa16.73■□□□□ 0.27
CCDC40-205ENST00000571028 MANSC4A6NHS7 340 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-205ENST00000571028 WNT10BO00744 389 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms