RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 ZNF609O15014 1411 aa13.97□□□□□ -0.17
SMG6-206ENST00000570668 PSME4Q14997 1843 aa13.97□□□□□ -0.17
SMG6-206ENST00000570668 USP17L3A6NCW0 530 aa13.96□□□□□ -0.17
SMG6-206ENST00000570668 USP17L4A6NCW7 530 aa13.96□□□□□ -0.17
SMG6-206ENST00000570668 H7C1D1 291 aa13.96□□□□□ -0.17
SMG6-206ENST00000570668 ITGBL1O95965 494 aaPredicted RBP13.96□□□□□ -0.17
SMG6-206ENST00000570668 RSBN1LQ6PCB5 846 aaPredicted RBP13.96□□□□□ -0.17
SMG6-206ENST00000570668 USP17L1Q7RTZ2 530 aa13.96□□□□□ -0.17
SMG6-206ENST00000570668 MICALL2Q8IY33 904 aa13.96□□□□□ -0.17
SMG6-206ENST00000570668 TNNQ9UQP3 1299 aa13.96□□□□□ -0.17
SMG6-206ENST00000570668 MROH5Q6ZUA9 1318 aa13.95□□□□□ -0.18
SMG6-206ENST00000570668 PASKQ96RG2 1323 aa13.95□□□□□ -0.18
SMG6-206ENST00000570668 SHTN1A0MZ66 631 aa13.95□□□□□ -0.18
SMG6-206ENST00000570668 GNAI3P08754 354 aa13.95□□□□□ -0.18
SMG6-206ENST00000570668 RFX5P48382 616 aaPredicted RBP13.95□□□□□ -0.18
SMG6-206ENST00000570668 MAP1SQ66K74 1059 aaPredicted RBP13.95□□□□□ -0.18
SMG6-206ENST00000570668 CNTROBQ8N137 903 aa13.95□□□□□ -0.18
SMG6-206ENST00000570668 AGBL3Q8NEM8 1001 aa13.95□□□□□ -0.18
SMG6-206ENST00000570668 CLUAP1Q96AJ1 413 aa13.95□□□□□ -0.18
SMG6-206ENST00000570668 GMLQ99445 158 aa13.95□□□□□ -0.18
SMG6-206ENST00000570668 PGAP2Q9UHJ9 254 aa13.95□□□□□ -0.18
SMG6-206ENST00000570668 LRRFIP2Q9Y608 721 aaKnown RBP13.95□□□□□ -0.18
SMG6-206ENST00000570668 PLIN1O60240 522 aa13.94□□□□□ -0.18
SMG6-206ENST00000570668 HIRAP54198 1017 aaPredicted RBP13.94□□□□□ -0.18
SMG6-206ENST00000570668 PTPN12Q05209 780 aaKnown RBP13.94□□□□□ -0.18
SMG6-206ENST00000570668 UBE4AQ14139 1066 aa13.94□□□□□ -0.18
SMG6-206ENST00000570668 LRRC24Q50LG9 513 aa13.94□□□□□ -0.18
SMG6-206ENST00000570668 STRIP1Q5VSL9 837 aa13.94□□□□□ -0.18
SMG6-206ENST00000570668 KLHDC4Q8TBB5 520 aa13.94□□□□□ -0.18
SMG6-206ENST00000570668 TRPM4Q8TD43 1214 aa13.94□□□□□ -0.18
SMG6-206ENST00000570668 ZC3H15Q8WU90 426 aaKnown RBP13.94□□□□□ -0.18
SMG6-206ENST00000570668 CD209Q9NNX6 404 aa13.94□□□□□ -0.18
SMG6-206ENST00000570668 HTRA3P83110 453 aa13.93□□□□□ -0.18
SMG6-206ENST00000570668 DACT2Q5SW24 774 aa13.93□□□□□ -0.18
SMG6-206ENST00000570668 SAMD7Q7Z3H4 446 aa13.93□□□□□ -0.18
SMG6-206ENST00000570668 TMEM57Q8N5G2 664 aa13.93□□□□□ -0.18
SMG6-206ENST00000570668 DNAJC5GQ8N7S2 189 aa13.93□□□□□ -0.18
SMG6-206ENST00000570668 VGLL2Q8N8G2 317 aa13.93□□□□□ -0.18
SMG6-206ENST00000570668 FBXO3Q9UK99 471 aa13.93□□□□□ -0.18
SMG6-206ENST00000570668 EYA2O00167 538 aa13.92□□□□□ -0.18
SMG6-206ENST00000570668 PDE8BO95263 885 aa13.92□□□□□ -0.18
SMG6-206ENST00000570668 IL1R1P14778 569 aa13.92□□□□□ -0.18
SMG6-206ENST00000570668 ZNF280AP59817 542 aaPredicted RBP13.92□□□□□ -0.18
SMG6-206ENST00000570668 METTL24Q5JXM2 366 aa13.92□□□□□ -0.18
SMG6-206ENST00000570668 TTLL5Q6EMB2 1281 aa13.92□□□□□ -0.18
SMG6-206ENST00000570668 ZNF804AQ7Z570 1209 aa13.92□□□□□ -0.18
SMG6-206ENST00000570668 MYO3BQ8WXR4 1341 aa13.91□□□□□ -0.18
SMG6-206ENST00000570668 EGFRP00533 1210 aa13.91□□□□□ -0.18
SMG6-206ENST00000570668 USP17L8P0C7I0 530 aa13.91□□□□□ -0.18
SMG6-206ENST00000570668 MTX1Q13505 466 aa13.91□□□□□ -0.18
SMG6-206ENST00000570668 TBC1D10BQ4KMP7 808 aaPredicted RBP13.91□□□□□ -0.18
SMG6-206ENST00000570668 DZIP1LQ8IYY4 767 aaKnown RBP13.91□□□□□ -0.18
SMG6-206ENST00000570668 CREBZFQ9NS37 354 aa13.91□□□□□ -0.18
SMG6-206ENST00000570668 ZNF646O15015 1829 aaPredicted RBP13.91□□□□□ -0.18
SMG6-206ENST00000570668 CIAO1O76071 339 aa13.9□□□□□ -0.18
SMG6-206ENST00000570668 GNAI2P04899 355 aa13.9□□□□□ -0.18
SMG6-206ENST00000570668 GTF2IP78347 998 aa13.9□□□□□ -0.18
SMG6-206ENST00000570668 ATG9AQ7Z3C6 839 aa13.9□□□□□ -0.18
SMG6-206ENST00000570668 FTSJ3Q8IY81 847 aaKnown RBP13.9□□□□□ -0.18
SMG6-206ENST00000570668 FAM84BQ96KN1 310 aaPredicted RBP13.9□□□□□ -0.18
SMG6-206ENST00000570668 MXD3Q9BW11 206 aa13.9□□□□□ -0.18
SMG6-206ENST00000570668 COPRSQ9NQ92 184 aa13.9□□□□□ -0.18
SMG6-206ENST00000570668 PCNTO95613 3336 aa13.89□□□□□ -0.19
SMG6-206ENST00000570668 RLBP1P12271 317 aa13.89□□□□□ -0.19
SMG6-206ENST00000570668 FGFR2P21802 821 aa13.89□□□□□ -0.19
SMG6-206ENST00000570668 HIBADHP31937 336 aaKnown RBP13.89□□□□□ -0.19
SMG6-206ENST00000570668 MMP14P50281 582 aa13.89□□□□□ -0.19
SMG6-206ENST00000570668 KIF4BQ2VIQ3 1234 aa13.89□□□□□ -0.19
SMG6-206ENST00000570668 RBM26Q5T8P6 1007 aaKnown RBP13.89□□□□□ -0.19
SMG6-206ENST00000570668 FBXO33Q7Z6M2 555 aa13.89□□□□□ -0.19
SMG6-206ENST00000570668 TDRD7Q8NHU6 1098 aaKnown RBP13.89□□□□□ -0.19
SMG6-206ENST00000570668 FBXW7Q969H0 707 aa13.89□□□□□ -0.19
SMG6-206ENST00000570668 KLRG1Q96E93 195 aa13.89□□□□□ -0.19
SMG6-206ENST00000570668 TMEM88BA6NKF7 163 aa13.88□□□□□ -0.19
SMG6-206ENST00000570668 SRGAP3O43295 1099 aa13.88□□□□□ -0.19
SMG6-206ENST00000570668 SASH1O94885 1247 aa13.88□□□□□ -0.19
SMG6-206ENST00000570668 GYG1P46976 350 aa13.88□□□□□ -0.19
SMG6-206ENST00000570668 PUM3Q15397 648 aaKnown RBP13.88□□□□□ -0.19
SMG6-206ENST00000570668 CDC37L1Q7L3B6 337 aa13.88□□□□□ -0.19
SMG6-206ENST00000570668 OGFOD1Q8N543 542 aa13.88□□□□□ -0.19
SMG6-206ENST00000570668 GLIS2Q9BZE0 524 aaPredicted RBP13.88□□□□□ -0.19
SMG6-206ENST00000570668 SIL1Q9H173 461 aa13.88□□□□□ -0.19
SMG6-206ENST00000570668 MYOZ2Q9NPC6 264 aa13.88□□□□□ -0.19
SMG6-206ENST00000570668 RCAN3Q9UKA8 241 aa13.88□□□□□ -0.19
SMG6-206ENST00000570668 PA2G4Q9UQ80 394 aaKnown RBP13.88□□□□□ -0.19
SMG6-206ENST00000570668 FAM205AQ6ZU69 1335 aa13.88□□□□□ -0.19
SMG6-206ENST00000570668 TRAF5O00463 557 aa13.87□□□□□ -0.19
SMG6-206ENST00000570668 ZBTB7BO15156 539 aaPredicted RBP13.87□□□□□ -0.19
SMG6-206ENST00000570668 IFIT1P09914 478 aaKnown RBP13.87□□□□□ -0.19
SMG6-206ENST00000570668 MS4A1P11836 297 aa13.87□□□□□ -0.19
SMG6-206ENST00000570668 IL15P40933 162 aaPredicted RBP13.87□□□□□ -0.19
SMG6-206ENST00000570668 FKBP1AP62942 108 aaKnown RBP13.87□□□□□ -0.19
SMG6-206ENST00000570668 FMR1Q06787 632 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMG6-206ENST00000570668 ITPRIPQ8IWB1 547 aa13.87□□□□□ -0.19
SMG6-206ENST00000570668 CERS5Q8N5B7 392 aa13.87□□□□□ -0.19
SMG6-206ENST00000570668 POLR2AP24928 1970 aaKnown RBP13.86□□□□□ -0.19
SMG6-206ENST00000570668 CAVIN4Q5BKX8 364 aa13.86□□□□□ -0.19
SMG6-206ENST00000570668 KIAA0825Q8IV33 1275 aa13.86□□□□□ -0.19
SMG6-206ENST00000570668 LPIN2Q92539 896 aa13.86□□□□□ -0.19
SMG6-206ENST00000570668 DCPSQ96C86 337 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms