RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SCUBE2Q9NQ36 999 aa8.13□□□□□ -1.11
CTDNEP1-204ENST00000570484 CNNM1Q9NRU3 951 aa8.13□□□□□ -1.11
CTDNEP1-204ENST00000570484 EXOC6BQ9Y2D4 811 aa8.13□□□□□ -1.11
CTDNEP1-204ENST00000570484 DDX60Q8IY21 1712 aaKnown RBP8.12□□□□□ -1.11
CTDNEP1-204ENST00000570484 NRXN2Q9P2S2 1712 aa8.12□□□□□ -1.11
CTDNEP1-204ENST00000570484 H0YIN7 160 aa8.12□□□□□ -1.11
CTDNEP1-204ENST00000570484 RAB11FIP3O75154 756 aa8.12□□□□□ -1.11
CTDNEP1-204ENST00000570484 CSF1RP07333 972 aa8.12□□□□□ -1.11
CTDNEP1-204ENST00000570484 LDHAL6AQ6ZMR3 332 aa8.12□□□□□ -1.11
CTDNEP1-204ENST00000570484 C2CD5Q86YS7 1000 aa8.12□□□□□ -1.11
CTDNEP1-204ENST00000570484 SIRT2Q8IXJ6 389 aa8.12□□□□□ -1.11
CTDNEP1-204ENST00000570484 KIF1BPQ96EK5 621 aa8.12□□□□□ -1.11
CTDNEP1-204ENST00000570484 LRRCC1Q9C099 1032 aa8.12□□□□□ -1.11
CTDNEP1-204ENST00000570484 PA2G4Q9UQ80 394 aaKnown RBP8.12□□□□□ -1.11
CTDNEP1-204ENST00000570484 MROH5Q6ZUA9 1318 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 KDM2BQ8NHM5 1336 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 EYA2O00167 538 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 PPEF1O14829 653 aaPredicted RBP8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 CIAO1O76071 339 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 IGHDP01880 384 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 NPR1P16066 1061 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 IL15P40933 162 aaPredicted RBP8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 PTPN12Q05209 780 aaKnown RBP8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 GRAPQ13588 217 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 NBR1Q14596 966 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 CRY2Q49AN0 593 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 METTL24Q5JXM2 366 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 ANKRD45Q5TZF3 282 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 TMC4Q7Z404 712 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 KLHDC4Q8TBB5 520 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 GRAPLQ8TC17 118 aaPredicted RBP8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 ZNF622Q969S3 477 aaKnown RBP eCLIP8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 MASTLQ96GX5 879 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 ZNF594Q96JF6 807 aaPredicted RBP8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 DCTPP1Q9H773 170 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 COPRSQ9NQ92 184 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 SEC31BQ9NQW1 1179 aa8.11□□□□□ -1.11
CTDNEP1-204ENST00000570484 ALDH1B1P30837 517 aa8.1□□□□□ -1.11
CTDNEP1-204ENST00000570484 KCNJ4P48050 445 aa8.1□□□□□ -1.11
CTDNEP1-204ENST00000570484 RFX5P48382 616 aaPredicted RBP8.1□□□□□ -1.11
CTDNEP1-204ENST00000570484 STYK1Q6J9G0 422 aa8.1□□□□□ -1.11
CTDNEP1-204ENST00000570484 SMC5Q8IY18 1101 aa8.1□□□□□ -1.11
CTDNEP1-204ENST00000570484 CLASRPQ8N2M8 674 aaKnown RBP8.1□□□□□ -1.11
CTDNEP1-204ENST00000570484 GPATCH3Q96I76 525 aa8.1□□□□□ -1.11
CTDNEP1-204ENST00000570484 CEP126Q9P2H0 1117 aa8.1□□□□□ -1.11
CTDNEP1-204ENST00000570484 TESPA1A2RU30 521 aaPredicted RBP8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 KLRG2A4D1S0 409 aaPredicted RBP8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 SPDYE16A6NNV3 312 aaPredicted RBP8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 IFIT2P09913 472 aaKnown RBP8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 SRGNP10124 158 aa8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 RPS8P62241 208 aaKnown RBP8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 NUCB1Q02818 461 aa8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 CHD1LQ86WJ1 897 aa8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 RHPN1Q8TCX5 695 aa8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 CELF1Q92879 486 aaKnown RBP8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 CNKSR1Q969H4 720 aa8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 CRAMP1Q96RY5 1269 aa8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 LNPKQ9C0E8 428 aa8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 ANKRD2Q9GZV1 360 aa8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 IL1RAPL2Q9NP60 686 aa8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 BSDC1Q9NW68 430 aaPredicted RBP8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 AKAP2Q9Y2D5 859 aa8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 NOP58Q9Y2X3 529 aaKnown RBP8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 CD2APQ9Y5K6 639 aa8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 ZNF609O15014 1411 aa8.09□□□□□ -1.11
CTDNEP1-204ENST00000570484 DPYSL4O14531 572 aa8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 BBOX1O75936 387 aa8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 SLC5A1P13866 664 aa8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 HOXB3P14651 431 aaPredicted RBP8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 CHRNA5P30532 468 aa8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 HOXA10P31260 410 aaPredicted RBP8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 PTGER2P43116 358 aa8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 TGFB2P61812 414 aa8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 TFCP2Q12800 502 aa8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 PUM3Q15397 648 aaKnown RBP8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 LRRC24Q50LG9 513 aa8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 GORABQ5T7V8 394 aa8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 PRPF40BQ6NWY9 871 aaKnown RBP8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 AACSQ86V21 672 aa8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 SLAIN1Q8ND83 568 aa8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 ANKIB1Q9P2G1 1089 aa8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 COL11A2P13942 1736 aaPredicted RBP8.08□□□□□ -1.12
CTDNEP1-204ENST00000570484 XDHP47989 1333 aa8.07□□□□□ -1.12
CTDNEP1-204ENST00000570484 SMARCA5O60264 1052 aaPredicted RBP8.07□□□□□ -1.12
CTDNEP1-204ENST00000570484 IFIT1P09914 478 aaKnown RBP8.07□□□□□ -1.12
CTDNEP1-204ENST00000570484 RGS3P49796 1198 aa8.07□□□□□ -1.12
CTDNEP1-204ENST00000570484 CHRNDQ07001 517 aa8.07□□□□□ -1.12
CTDNEP1-204ENST00000570484 ATP2B3Q16720 1220 aa8.07□□□□□ -1.12
CTDNEP1-204ENST00000570484 TNNI3KQ59H18 835 aa8.07□□□□□ -1.12
CTDNEP1-204ENST00000570484 SOGA3Q5TF21 947 aa8.07□□□□□ -1.12
CTDNEP1-204ENST00000570484 TTLL6Q8N841 843 aa8.07□□□□□ -1.12
CTDNEP1-204ENST00000570484 NEUROD6Q96NK8 337 aa8.07□□□□□ -1.12
CTDNEP1-204ENST00000570484 PUS3Q9BZE2 481 aaKnown RBP8.07□□□□□ -1.12
CTDNEP1-204ENST00000570484 FPGT-TNNI3KV9GXZ4 949 aa8.07□□□□□ -1.12
CTDNEP1-204ENST00000570484 MYH3P11055 1940 aa8.07□□□□□ -1.12
CTDNEP1-204ENST00000570484 SEMA3EO15041 775 aa8.06□□□□□ -1.12
CTDNEP1-204ENST00000570484 UFL1O94874 794 aa8.06□□□□□ -1.12
CTDNEP1-204ENST00000570484 PDE8BO95263 885 aa8.06□□□□□ -1.12
CTDNEP1-204ENST00000570484 DPEP1P16444 411 aa8.06□□□□□ -1.12
CTDNEP1-204ENST00000570484 MX1P20591 662 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms