RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 YDJCA8MPS7 323 aa11.98□□□□□ -0.49
HCCAT5-201ENST00000569990 PTPN12Q05209 780 aaKnown RBP11.98□□□□□ -0.49
HCCAT5-201ENST00000569990 CXCL9Q07325 125 aa11.98□□□□□ -0.49
HCCAT5-201ENST00000569990 MTX1Q13505 466 aa11.98□□□□□ -0.49
HCCAT5-201ENST00000569990 LRRC24Q50LG9 513 aa11.98□□□□□ -0.49
HCCAT5-201ENST00000569990 GPC2Q8N158 579 aa11.98□□□□□ -0.49
HCCAT5-201ENST00000569990 HELBQ8NG08 1087 aaPredicted RBP11.98□□□□□ -0.49
HCCAT5-201ENST00000569990 L3MBTL3Q96JM7 780 aaPredicted RBP11.98□□□□□ -0.49
HCCAT5-201ENST00000569990 DBNDD1Q9H9R9 158 aa11.98□□□□□ -0.49
HCCAT5-201ENST00000569990 RRAGCQ9HB90 399 aa11.98□□□□□ -0.49
HCCAT5-201ENST00000569990 MROH5Q6ZUA9 1318 aa11.97□□□□□ -0.49
HCCAT5-201ENST00000569990 POTECB2RU33 542 aa11.97□□□□□ -0.49
HCCAT5-201ENST00000569990 SNAP23O00161 211 aa11.97□□□□□ -0.49
HCCAT5-201ENST00000569990 ECE2O60344 883 aa11.97□□□□□ -0.49
HCCAT5-201ENST00000569990 TAF5LO75529 589 aa11.97□□□□□ -0.49
HCCAT5-201ENST00000569990 POTEIP0CG38 1075 aa11.97□□□□□ -0.49
HCCAT5-201ENST00000569990 DOK7Q18PE1 504 aa11.97□□□□□ -0.49
HCCAT5-201ENST00000569990 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.97□□□□□ -0.49
HCCAT5-201ENST00000569990 IRS2Q9Y4H2 1338 aa11.96□□□□□ -0.49
HCCAT5-201ENST00000569990 EYA2O00167 538 aa11.96□□□□□ -0.49
HCCAT5-201ENST00000569990 SRGAP3O43295 1099 aa11.96□□□□□ -0.49
HCCAT5-201ENST00000569990 RAD17O75943 681 aa11.96□□□□□ -0.49
HCCAT5-201ENST00000569990 VEGFAP15692 232 aaPredicted RBP11.96□□□□□ -0.49
HCCAT5-201ENST00000569990 KLRK1P26718 216 aa11.96□□□□□ -0.49
HCCAT5-201ENST00000569990 KCNJ4P48050 445 aa11.96□□□□□ -0.49
HCCAT5-201ENST00000569990 PDE3AQ14432 1141 aa11.96□□□□□ -0.49
HCCAT5-201ENST00000569990 MVPQ14764 893 aaKnown RBP11.96□□□□□ -0.49
HCCAT5-201ENST00000569990 CIAPIN1Q6FI81 312 aa11.96□□□□□ -0.49
HCCAT5-201ENST00000569990 TXNRD3Q86VQ6 643 aa11.96□□□□□ -0.49
HCCAT5-201ENST00000569990 VGLL2Q8N8G2 317 aa11.96□□□□□ -0.49
HCCAT5-201ENST00000569990 FBXO3Q9UK99 471 aa11.96□□□□□ -0.49
HCCAT5-201ENST00000569990 COG6Q9Y2V7 657 aa11.96□□□□□ -0.49
HCCAT5-201ENST00000569990 GJA3Q9Y6H8 435 aa11.96□□□□□ -0.49
HCCAT5-201ENST00000569990 G3V3G9 751 aa11.95□□□□□ -0.5
HCCAT5-201ENST00000569990 METTL24Q5JXM2 366 aa11.95□□□□□ -0.5
HCCAT5-201ENST00000569990 DCAF8Q5TAQ9 597 aa11.95□□□□□ -0.5
HCCAT5-201ENST00000569990 C20orf194Q5TEA3 1177 aa11.95□□□□□ -0.5
HCCAT5-201ENST00000569990 C15orf52Q6ZUT6 534 aaKnown RBP11.95□□□□□ -0.5
HCCAT5-201ENST00000569990 ATG9AQ7Z3C6 839 aa11.95□□□□□ -0.5
HCCAT5-201ENST00000569990 C1orf115Q9H7X2 142 aa11.95□□□□□ -0.5
HCCAT5-201ENST00000569990 COPRSQ9NQ92 184 aa11.95□□□□□ -0.5
HCCAT5-201ENST00000569990 KCNQ5Q9NR82 932 aa11.95□□□□□ -0.5
HCCAT5-201ENST00000569990 PA2G4Q9UQ80 394 aaKnown RBP11.95□□□□□ -0.5
HCCAT5-201ENST00000569990 PNMA6EA0A0J9YXQ4 647 aa11.94□□□□□ -0.5
HCCAT5-201ENST00000569990 IQCA1LA6NCM1 817 aa11.94□□□□□ -0.5
HCCAT5-201ENST00000569990 CIAO1O76071 339 aa11.94□□□□□ -0.5
HCCAT5-201ENST00000569990 PDE8BO95263 885 aa11.94□□□□□ -0.5
HCCAT5-201ENST00000569990 SCNN1DP51172 638 aa11.94□□□□□ -0.5
HCCAT5-201ENST00000569990 UBE4AQ14139 1066 aa11.94□□□□□ -0.5
HCCAT5-201ENST00000569990 TNIP1Q15025 636 aa11.94□□□□□ -0.5
HCCAT5-201ENST00000569990 PODNQ7Z5L7 613 aa11.94□□□□□ -0.5
HCCAT5-201ENST00000569990 DCBLD2Q96PD2 775 aa11.94□□□□□ -0.5
HCCAT5-201ENST00000569990 COA1Q9GZY4 146 aa11.94□□□□□ -0.5
HCCAT5-201ENST00000569990 SIL1Q9H173 461 aa11.94□□□□□ -0.5
HCCAT5-201ENST00000569990 DDX19BQ9UMR2 479 aa11.94□□□□□ -0.5
HCCAT5-201ENST00000569990 SCN9AQ15858 1988 aa11.93□□□□□ -0.5
HCCAT5-201ENST00000569990 PSMD14O00487 310 aa11.93□□□□□ -0.5
HCCAT5-201ENST00000569990 RRP1P56182 461 aaKnown RBP11.93□□□□□ -0.5
HCCAT5-201ENST00000569990 C16orf71Q8IYS4 520 aaPredicted RBP11.93□□□□□ -0.5
HCCAT5-201ENST00000569990 TAF1DQ9H5J8 278 aaPredicted RBP11.93□□□□□ -0.5
HCCAT5-201ENST00000569990 ZBTB40Q9NUA8 1239 aa11.93□□□□□ -0.5
HCCAT5-201ENST00000569990 HACL1Q9UJ83 578 aa11.93□□□□□ -0.5
HCCAT5-201ENST00000569990 SCN4AP35499 1836 aa11.93□□□□□ -0.5
HCCAT5-201ENST00000569990 TOMM70O94826 608 aa11.92□□□□□ -0.5
HCCAT5-201ENST00000569990 VIL1P09327 827 aaKnown RBP11.92□□□□□ -0.5
HCCAT5-201ENST00000569990 FGFR2P21802 821 aa11.92□□□□□ -0.5
HCCAT5-201ENST00000569990 IL15P40933 162 aaPredicted RBP11.92□□□□□ -0.5
HCCAT5-201ENST00000569990 GMPSP49915 693 aaPredicted RBP11.92□□□□□ -0.5
HCCAT5-201ENST00000569990 ATP8B2P98198 1209 aa11.92□□□□□ -0.5
HCCAT5-201ENST00000569990 SSH3Q8TE77 659 aa11.92□□□□□ -0.5
HCCAT5-201ENST00000569990 CD209Q9NNX6 404 aa11.92□□□□□ -0.5
HCCAT5-201ENST00000569990 GPRC5DQ9NZD1 345 aa11.92□□□□□ -0.5
HCCAT5-201ENST00000569990 USP17L3A6NCW0 530 aa11.91□□□□□ -0.5
HCCAT5-201ENST00000569990 USP17L4A6NCW7 530 aa11.91□□□□□ -0.5
HCCAT5-201ENST00000569990 LMOD1P29536 600 aaPredicted RBP11.91□□□□□ -0.5
HCCAT5-201ENST00000569990 EPHX2P34913 555 aa11.91□□□□□ -0.5
HCCAT5-201ENST00000569990 EPS15P42566 896 aa11.91□□□□□ -0.5
HCCAT5-201ENST00000569990 C1QTNF8P60827 252 aa11.91□□□□□ -0.5
HCCAT5-201ENST00000569990 PUM3Q15397 648 aaKnown RBP11.91□□□□□ -0.5
HCCAT5-201ENST00000569990 CEP85Q6P2H3 762 aa11.91□□□□□ -0.5
HCCAT5-201ENST00000569990 USP17L1Q7RTZ2 530 aa11.91□□□□□ -0.5
HCCAT5-201ENST00000569990 ZNF804AQ7Z570 1209 aa11.91□□□□□ -0.5
HCCAT5-201ENST00000569990 CHMP4BQ9H444 224 aaKnown RBP11.91□□□□□ -0.5
HCCAT5-201ENST00000569990 CEP126Q9P2H0 1117 aa11.91□□□□□ -0.5
HCCAT5-201ENST00000569990 ZNF609O15014 1411 aa11.91□□□□□ -0.5
HCCAT5-201ENST00000569990 PSME4Q14997 1843 aa11.9□□□□□ -0.5
HCCAT5-201ENST00000569990 IL1R1P14778 569 aa11.9□□□□□ -0.5
HCCAT5-201ENST00000569990 RPS12P25398 132 aaKnown RBP11.9□□□□□ -0.5
HCCAT5-201ENST00000569990 GYG1P46976 350 aa11.9□□□□□ -0.5
HCCAT5-201ENST00000569990 STRIP1Q5VSL9 837 aa11.9□□□□□ -0.5
HCCAT5-201ENST00000569990 RSBN1LQ6PCB5 846 aaPredicted RBP11.9□□□□□ -0.5
HCCAT5-201ENST00000569990 RBM46Q8TBY0 533 aaKnown RBP11.9□□□□□ -0.5
HCCAT5-201ENST00000569990 LPIN2Q92539 896 aa11.9□□□□□ -0.5
HCCAT5-201ENST00000569990 DPF2Q92785 391 aa11.9□□□□□ -0.5
HCCAT5-201ENST00000569990 FAM84BQ96KN1 310 aaPredicted RBP11.9□□□□□ -0.5
HCCAT5-201ENST00000569990 ZNF646O15015 1829 aaPredicted RBP11.89□□□□□ -0.51
HCCAT5-201ENST00000569990 IFIT1P09914 478 aaKnown RBP11.89□□□□□ -0.51
HCCAT5-201ENST00000569990 POTEJP0CG39 1038 aa11.89□□□□□ -0.51
HCCAT5-201ENST00000569990 HIBADHP31937 336 aaKnown RBP11.89□□□□□ -0.51
HCCAT5-201ENST00000569990 DACT2Q5SW24 774 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms