RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 ANKARQ7Z5J8 1434 aa10.97□□□□□ -0.65
CCDC113-205ENST00000569374 NRKQ7Z2Y5 1582 aa10.96□□□□□ -0.65
CCDC113-205ENST00000569374 SLIT2O94813 1529 aa10.96□□□□□ -0.65
CCDC113-205ENST00000569374 CDK12Q9NYV4 1490 aaPredicted RBP10.96□□□□□ -0.65
CCDC113-205ENST00000569374 TCF3P15923 654 aa10.96□□□□□ -0.65
CCDC113-205ENST00000569374 SPRYD7Q5W111 196 aa10.96□□□□□ -0.65
CCDC113-205ENST00000569374 QTRT2Q9H974 415 aaKnown RBP10.96□□□□□ -0.65
CCDC113-205ENST00000569374 TREHO43280 583 aa10.95□□□□□ -0.66
CCDC113-205ENST00000569374 PTGIRP43119 386 aa10.95□□□□□ -0.66
CCDC113-205ENST00000569374 USP5P45974 858 aa10.95□□□□□ -0.66
CCDC113-205ENST00000569374 ZNF772Q68DY9 489 aaPredicted RBP10.95□□□□□ -0.66
CCDC113-205ENST00000569374 Q6ZVU0 165 aa10.95□□□□□ -0.66
CCDC113-205ENST00000569374 SNIP1Q8TAD8 396 aaKnown RBP10.95□□□□□ -0.66
CCDC113-205ENST00000569374 PRKD2Q9BZL6 878 aa10.95□□□□□ -0.66
CCDC113-205ENST00000569374 CABP1Q9NZU7 370 aa10.95□□□□□ -0.66
CCDC113-205ENST00000569374 POGKQ9P215 609 aa10.95□□□□□ -0.66
CCDC113-205ENST00000569374 HRH3Q9Y5N1 445 aa10.95□□□□□ -0.66
CCDC113-205ENST00000569374 EML1O00423 815 aa10.94□□□□□ -0.66
CCDC113-205ENST00000569374 TNFRSF10BO14763 440 aa10.94□□□□□ -0.66
CCDC113-205ENST00000569374 CENPBP07199 599 aaPredicted RBP10.94□□□□□ -0.66
CCDC113-205ENST00000569374 NOS2P35228 1153 aa10.94□□□□□ -0.66
CCDC113-205ENST00000569374 CENPCQ03188 943 aa10.94□□□□□ -0.66
CCDC113-205ENST00000569374 RTN1Q16799 776 aa10.94□□□□□ -0.66
CCDC113-205ENST00000569374 KRT28Q7Z3Y7 464 aa10.94□□□□□ -0.66
CCDC113-205ENST00000569374 EMID1Q96A84 441 aaPredicted RBP10.94□□□□□ -0.66
CCDC113-205ENST00000569374 NGLY1Q96IV0 654 aa10.94□□□□□ -0.66
CCDC113-205ENST00000569374 RALGAPBQ86X10 1494 aa10.93□□□□□ -0.66
CCDC113-205ENST00000569374 AKAP12Q02952 1782 aa10.93□□□□□ -0.66
CCDC113-205ENST00000569374 MEN1O00255 615 aa10.93□□□□□ -0.66
CCDC113-205ENST00000569374 RXRBP28702 533 aa10.93□□□□□ -0.66
CCDC113-205ENST00000569374 PLCB3Q01970 1234 aa10.93□□□□□ -0.66
CCDC113-205ENST00000569374 C11orf91Q3C1V1 193 aa10.93□□□□□ -0.66
CCDC113-205ENST00000569374 ZNF697Q5TEC3 545 aa10.93□□□□□ -0.66
CCDC113-205ENST00000569374 ZNF598Q86UK7 904 aaKnown RBP10.93□□□□□ -0.66
CCDC113-205ENST00000569374 NIFKQ9BYG3 293 aaKnown RBP10.93□□□□□ -0.66
CCDC113-205ENST00000569374 COL14A1Q05707 1796 aaKnown RBP10.93□□□□□ -0.66
CCDC113-205ENST00000569374 PIK3C2AO00443 1686 aa10.92□□□□□ -0.66
CCDC113-205ENST00000569374 FZD6O60353 706 aa10.92□□□□□ -0.66
CCDC113-205ENST00000569374 P4HBP07237 508 aaKnown RBP10.92□□□□□ -0.66
CCDC113-205ENST00000569374 TMEM214Q6NUQ4 689 aaKnown RBP10.92□□□□□ -0.66
CCDC113-205ENST00000569374 ALDH16A1Q8IZ83 802 aa10.92□□□□□ -0.66
CCDC113-205ENST00000569374 L3MBTL2Q969R5 705 aa10.92□□□□□ -0.66
CCDC113-205ENST00000569374 ZSCAN10Q96SZ4 725 aaPredicted RBP10.92□□□□□ -0.66
CCDC113-205ENST00000569374 USP21Q9UK80 565 aa10.92□□□□□ -0.66
CCDC113-205ENST00000569374 ZIC2O95409 532 aaPredicted RBP10.91□□□□□ -0.66
CCDC113-205ENST00000569374 PCSK2P16519 638 aa10.91□□□□□ -0.66
CCDC113-205ENST00000569374 ATP2B2Q01814 1243 aa10.91□□□□□ -0.66
CCDC113-205ENST00000569374 FMR1Q06787 632 aaKnown RBP eCLIP10.91□□□□□ -0.66
CCDC113-205ENST00000569374 FOXC1Q12948 553 aa10.91□□□□□ -0.66
CCDC113-205ENST00000569374 CBLBQ13191 982 aa10.91□□□□□ -0.66
CCDC113-205ENST00000569374 FHDC1Q9C0D6 1143 aaPredicted RBP10.91□□□□□ -0.66
CCDC113-205ENST00000569374 LRFN2Q9ULH4 789 aa10.91□□□□□ -0.66
CCDC113-205ENST00000569374 SBNO1A3KN83 1393 aa10.9□□□□□ -0.66
CCDC113-205ENST00000569374 RGPD5Q99666 1765 aa10.9□□□□□ -0.66
CCDC113-205ENST00000569374 LMO7Q8WWI1 1683 aa10.9□□□□□ -0.66
CCDC113-205ENST00000569374 HIF1AQ16665 826 aa10.9□□□□□ -0.66
CCDC113-205ENST00000569374 C1orf53Q5VUE5 145 aa10.9□□□□□ -0.66
CCDC113-205ENST00000569374 SPNS2Q8IVW8 549 aa10.9□□□□□ -0.66
CCDC113-205ENST00000569374 ALKBH8Q96BT7 664 aaKnown RBP10.9□□□□□ -0.66
CCDC113-205ENST00000569374 ITPKCQ96DU7 683 aa10.9□□□□□ -0.66
CCDC113-205ENST00000569374 FAM129BQ96TA1 746 aa10.9□□□□□ -0.66
CCDC113-205ENST00000569374 CCDC87Q9NVE4 849 aa10.9□□□□□ -0.66
CCDC113-205ENST00000569374 USP3Q9Y6I4 520 aa10.9□□□□□ -0.66
CCDC113-205ENST00000569374 THSD7AQ9UPZ6 1657 aa10.89□□□□□ -0.67
CCDC113-205ENST00000569374 TTC24A2A3L6 582 aaPredicted RBP10.89□□□□□ -0.67
CCDC113-205ENST00000569374 WDR4P57081 412 aaKnown RBP10.89□□□□□ -0.67
CCDC113-205ENST00000569374 RBM6P78332 1123 aaKnown RBP10.89□□□□□ -0.67
CCDC113-205ENST00000569374 NEUROD1Q13562 356 aa10.89□□□□□ -0.67
CCDC113-205ENST00000569374 GNASQ5JWF2 1037 aa10.89□□□□□ -0.67
CCDC113-205ENST00000569374 KDF1Q8NAX2 398 aaPredicted RBP10.89□□□□□ -0.67
CCDC113-205ENST00000569374 TTC16Q8NEE8 873 aa10.89□□□□□ -0.67
CCDC113-205ENST00000569374 RHBDD1Q8TEB9 315 aa10.89□□□□□ -0.67
CCDC113-205ENST00000569374 FAM13BQ9NYF5 915 aa10.89□□□□□ -0.67
CCDC113-205ENST00000569374 HCN4Q9Y3Q4 1203 aa10.89□□□□□ -0.67
CCDC113-205ENST00000569374 MON2Q7Z3U7 1717 aa10.89□□□□□ -0.67
CCDC113-205ENST00000569374 WNK3Q9BYP7 1800 aa10.88□□□□□ -0.67
CCDC113-205ENST00000569374 PRPF40AO75400 957 aaKnown RBP10.88□□□□□ -0.67
CCDC113-205ENST00000569374 LDHBP07195 334 aaKnown RBP10.88□□□□□ -0.67
CCDC113-205ENST00000569374 MZF1P28698 734 aaPredicted RBP10.88□□□□□ -0.67
CCDC113-205ENST00000569374 GPC1P35052 558 aa10.88□□□□□ -0.67
CCDC113-205ENST00000569374 MAPK8P45983 427 aa10.88□□□□□ -0.67
CCDC113-205ENST00000569374 TAGLNQ01995 201 aaKnown RBP10.88□□□□□ -0.67
CCDC113-205ENST00000569374 EHHADHQ08426 723 aa10.88□□□□□ -0.67
CCDC113-205ENST00000569374 DGKZQ13574 1117 aa10.88□□□□□ -0.67
CCDC113-205ENST00000569374 NBPF8Q3BBV2 869 aa10.88□□□□□ -0.67
CCDC113-205ENST00000569374 NUTM2GQ5VZR2 741 aa10.88□□□□□ -0.67
CCDC113-205ENST00000569374 TNS1Q9HBL0 1735 aaKnown RBP10.88□□□□□ -0.67
CCDC113-205ENST00000569374 RPLP1P05386 114 aaKnown RBP10.87□□□□□ -0.67
CCDC113-205ENST00000569374 RELBQ01201 579 aa10.87□□□□□ -0.67
CCDC113-205ENST00000569374 DSC3Q14574 896 aa10.87□□□□□ -0.67
CCDC113-205ENST00000569374 CYP4X1Q8N118 509 aa10.87□□□□□ -0.67
CCDC113-205ENST00000569374 ZDHHC1Q8WTX9 485 aa10.87□□□□□ -0.67
CCDC113-205ENST00000569374 IFT43Q96FT9 208 aa10.87□□□□□ -0.67
CCDC113-205ENST00000569374 CDK19Q9BWU1 502 aa10.87□□□□□ -0.67
CCDC113-205ENST00000569374 PHACTR1Q9C0D0 580 aa10.87□□□□□ -0.67
CCDC113-205ENST00000569374 MRS2Q9HD23 443 aa10.87□□□□□ -0.67
CCDC113-205ENST00000569374 PPIP5K1Q6PFW1 1433 aa10.86□□□□□ -0.67
CCDC113-205ENST00000569374 IGSF3O75054 1194 aa10.86□□□□□ -0.67
CCDC113-205ENST00000569374 TSNAXIP1Q2TAA8 658 aa10.86□□□□□ -0.67
CCDC113-205ENST00000569374 SLC27A3Q5K4L6 730 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms