RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 ATG9AQ7Z3C6 839 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 CADPS2Q86UW7 1296 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 PLA2G4DQ86XP0 818 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 DRC7Q8IY82 874 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 NSUN7Q8NE18 718 aaKnown RBP9.4□□□□□ -0.9
SPG7-220ENST00000569363 PGBD1Q96JS3 809 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 ZNF830Q96NB3 372 aaPredicted RBP9.4□□□□□ -0.9
SPG7-220ENST00000569363 CHMP3Q9Y3E7 222 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 TAF6LQ9Y6J9 622 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 GLI3P10071 1580 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 NUP188Q5SRE5 1749 aa9.39□□□□□ -0.91
SPG7-220ENST00000569363 SPATA31A3Q5VYP0 1347 aa9.39□□□□□ -0.91
SPG7-220ENST00000569363 WDR19Q8NEZ3 1342 aa9.39□□□□□ -0.91
SPG7-220ENST00000569363 PTPDC1A2A3K4 754 aa9.39□□□□□ -0.91
SPG7-220ENST00000569363 E7EWF7 191 aa9.39□□□□□ -0.91
SPG7-220ENST00000569363 AP5Z1O43299 807 aa9.39□□□□□ -0.91
SPG7-220ENST00000569363 KINO60870 393 aaKnown RBP9.39□□□□□ -0.91
SPG7-220ENST00000569363 EVCP57679 992 aa9.39□□□□□ -0.91
SPG7-220ENST00000569363 NKX1-1Q15270 411 aaPredicted RBP9.39□□□□□ -0.91
SPG7-220ENST00000569363 CCDC158Q5M9N0 1113 aa9.39□□□□□ -0.91
SPG7-220ENST00000569363 FAM173BQ6P4H8 233 aa9.39□□□□□ -0.91
SPG7-220ENST00000569363 CCDC129Q6ZRS4 1044 aa9.39□□□□□ -0.91
SPG7-220ENST00000569363 CKAP2LQ8IYA6 745 aa9.39□□□□□ -0.91
SPG7-220ENST00000569363 ZCRB1Q8TBF4 217 aaKnown RBP9.39□□□□□ -0.91
SPG7-220ENST00000569363 SEC62Q99442 399 aaKnown RBP9.39□□□□□ -0.91
SPG7-220ENST00000569363 TRIM5Q9C035 493 aa9.39□□□□□ -0.91
SPG7-220ENST00000569363 NAT10Q9H0A0 1025 aaKnown RBP9.39□□□□□ -0.91
SPG7-220ENST00000569363 KCNF1Q9H3M0 494 aa9.39□□□□□ -0.91
SPG7-220ENST00000569363 ANO10Q9NW15 660 aa9.39□□□□□ -0.91
SPG7-220ENST00000569363 CEP126Q9P2H0 1117 aa9.39□□□□□ -0.91
SPG7-220ENST00000569363 PAPPAQ13219 1627 aa9.38□□□□□ -0.91
SPG7-220ENST00000569363 UBR2Q8IWV8 1755 aa9.38□□□□□ -0.91
SPG7-220ENST00000569363 A0A1W2PQ27 194 aa9.38□□□□□ -0.91
SPG7-220ENST00000569363 A0A1W2PQ64 194 aa9.38□□□□□ -0.91
SPG7-220ENST00000569363 A0A1W2PQD8 194 aa9.38□□□□□ -0.91
SPG7-220ENST00000569363 NR1I2O75469 434 aa9.38□□□□□ -0.91
SPG7-220ENST00000569363 FAM160A1Q05DH4 1040 aa9.38□□□□□ -0.91
SPG7-220ENST00000569363 TRIM28Q13263 835 aaKnown RBP9.38□□□□□ -0.91
SPG7-220ENST00000569363 SYCP1Q15431 976 aa9.38□□□□□ -0.91
SPG7-220ENST00000569363 IMMTQ16891 758 aaKnown RBP9.38□□□□□ -0.91
SPG7-220ENST00000569363 STOX1Q6ZVD7 989 aa9.38□□□□□ -0.91
SPG7-220ENST00000569363 LUZP1Q86V48 1076 aa9.38□□□□□ -0.91
SPG7-220ENST00000569363 CCAR1Q8IX12 1150 aaKnown RBP9.38□□□□□ -0.91
SPG7-220ENST00000569363 SPC24Q8NBT2 197 aa9.38□□□□□ -0.91
SPG7-220ENST00000569363 JARID2Q92833 1246 aaPredicted RBP9.38□□□□□ -0.91
SPG7-220ENST00000569363 DDX11Q96FC9 970 aa9.38□□□□□ -0.91
SPG7-220ENST00000569363 MRFAP1L1Q96HT8 127 aa9.38□□□□□ -0.91
SPG7-220ENST00000569363 TEX13AQ9BXU3 409 aaPredicted RBP9.38□□□□□ -0.91
SPG7-220ENST00000569363 MAST3O60307 1309 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 WDR17Q8IZU2 1322 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 SALL1Q9NSC2 1324 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 TJP1Q07157 1748 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 A0A1B0GUL7 405 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 NBPF26B4DH59 902 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 HSPD1P10809 573 aaKnown RBP9.37□□□□□ -0.91
SPG7-220ENST00000569363 PTGS1P23219 599 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 PDIA3P30101 505 aaKnown RBP9.37□□□□□ -0.91
SPG7-220ENST00000569363 ADD1P35611 737 aaKnown RBP9.37□□□□□ -0.91
SPG7-220ENST00000569363 APOBRQ0VD83 1088 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 CCDC57Q2TAC2 916 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 TTC39AQ5SRH9 613 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 GORABQ5T7V8 394 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 NBPF14Q5TI25 921 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 ZSCAN25Q6NSZ9 544 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 NBPF10Q6P3W6 841 aaKnown RBP9.37□□□□□ -0.91
SPG7-220ENST00000569363 CCDC186Q7Z3E2 898 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 BRAPQ7Z569 592 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 NBPF15Q8N660 670 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 ISCA1Q9BUE6 129 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 CCDC94Q9BW85 323 aaPredicted RBP9.37□□□□□ -0.91
SPG7-220ENST00000569363 PLA2G12BQ9BX93 195 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 RTEL1Q9NZ71 1219 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 PYCARDQ9ULZ3 195 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 TNS2Q63HR2 1409 aa9.37□□□□□ -0.91
SPG7-220ENST00000569363 KCPQ6ZWJ8 1503 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 ROBO1Q9Y6N7 1651 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 BECN2A8MW95 431 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 CTDNEP1O95476 244 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 YEATS4O95619 227 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 PCCAP05165 728 aaPredicted RBP9.36□□□□□ -0.91
SPG7-220ENST00000569363 TPM4P67936 248 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 COL9A3Q14050 684 aaPredicted RBP9.36□□□□□ -0.91
SPG7-220ENST00000569363 IQCB1Q15051 598 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 TTLL7Q6ZT98 887 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 CEP57L1Q8IYX8 460 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 VSIG10Q8N0Z9 540 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 MPNDQ8N594 471 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 KCNG4Q8TDN1 519 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 MRPS27Q92552 414 aaKnown RBP9.36□□□□□ -0.91
SPG7-220ENST00000569363 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.36□□□□□ -0.912e-8■■■□□ 19.2
SPG7-220ENST00000569363 DNAJC25Q9H1X3 360 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 CLIP2Q9UDT6 1046 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 PAXBP1Q9Y5B6 917 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 MYH15Q9Y2K3 1946 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 CARMIL3Q8ND23 1372 aa9.36□□□□□ -0.91
SPG7-220ENST00000569363 SMTNL1A8MU46 457 aa9.35□□□□□ -0.91
SPG7-220ENST00000569363 ME1P48163 572 aa9.35□□□□□ -0.91
SPG7-220ENST00000569363 PIP4K2AP48426 406 aaPredicted RBP9.35□□□□□ -0.91
SPG7-220ENST00000569363 GSDMDP57764 484 aa9.35□□□□□ -0.91
SPG7-220ENST00000569363 TIMM10P62072 90 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms