RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	SAMD7	Q7Z3H4	446 aa		13	□□□□□ -0.33
UBR1-207	ENST00000568782	SUCLG2	Q96I99	432 aa		13	□□□□□ -0.33
UBR1-207	ENST00000568782	KCNQ5	Q9NR82	932 aa		13	□□□□□ -0.33
UBR1-207	ENST00000568782	MKRN1	Q9UHC7	482 aa	Known RBP	13	□□□□□ -0.33
UBR1-207	ENST00000568782	HDAC9	Q9UKV0	1011 aa		13	□□□□□ -0.33
UBR1-207	ENST00000568782	MROH5	Q6ZUA9	1318 aa		12.99	□□□□□ -0.33
UBR1-207	ENST00000568782	TAF5L	O75529	589 aa		12.99	□□□□□ -0.33
UBR1-207	ENST00000568782	UBTFL1	P0CB47	393 aa	Predicted RBP	12.99	□□□□□ -0.33
UBR1-207	ENST00000568782	BRPF1	P55201	1214 aa	Predicted RBP	12.99	□□□□□ -0.33
UBR1-207	ENST00000568782	KIF4B	Q2VIQ3	1234 aa		12.99	□□□□□ -0.33
UBR1-207	ENST00000568782	STRIP1	Q5VSL9	837 aa		12.99	□□□□□ -0.33
UBR1-207	ENST00000568782	SULF1	Q8IWU6	871 aa		12.99	□□□□□ -0.33
UBR1-207	ENST00000568782	HELB	Q8NG08	1087 aa	Predicted RBP	12.99	□□□□□ -0.33
UBR1-207	ENST00000568782	ZNF594	Q96JF6	807 aa	Predicted RBP	12.99	□□□□□ -0.33
UBR1-207	ENST00000568782	BICC1	Q9H694	974 aa	Known RBP	12.99	□□□□□ -0.33
UBR1-207	ENST00000568782	ECE1	P42892	770 aa		12.98	□□□□□ -0.33
UBR1-207	ENST00000568782	RARS	P54136	660 aa	Known RBP	12.98	□□□□□ -0.33
UBR1-207	ENST00000568782	EPHA10	Q5JZY3	1008 aa		12.98	□□□□□ -0.33
UBR1-207	ENST00000568782	VPS37D	Q86XT2	251 aa		12.98	□□□□□ -0.33
UBR1-207	ENST00000568782	JMY	Q8N9B5	988 aa		12.98	□□□□□ -0.33
UBR1-207	ENST00000568782	TRPM4	Q8TD43	1214 aa		12.98	□□□□□ -0.33
UBR1-207	ENST00000568782	ARHGAP45	Q92619	1136 aa		12.98	□□□□□ -0.33
UBR1-207	ENST00000568782	USP44	Q9H0E7	712 aa		12.98	□□□□□ -0.33
UBR1-207	ENST00000568782	ZNF408	Q9H9D4	720 aa		12.98	□□□□□ -0.33
UBR1-207	ENST00000568782	PGAP2	Q9UHJ9	254 aa		12.98	□□□□□ -0.33
UBR1-207	ENST00000568782	CELF2	O95319	508 aa	Known RBP	12.97	□□□□□ -0.33
UBR1-207	ENST00000568782	GTF2I	P78347	998 aa		12.97	□□□□□ -0.33
UBR1-207	ENST00000568782	UBE4A	Q14139	1066 aa		12.97	□□□□□ -0.33
UBR1-207	ENST00000568782	METTL24	Q5JXM2	366 aa		12.97	□□□□□ -0.33
UBR1-207	ENST00000568782	KRT26	Q7Z3Y9	468 aa		12.97	□□□□□ -0.33
UBR1-207	ENST00000568782	FRAT1	Q92837	279 aa	Predicted RBP	12.97	□□□□□ -0.33
UBR1-207	ENST00000568782	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.97	□□□□□ -0.33
UBR1-207	ENST00000568782	CD209	Q9NNX6	404 aa		12.97	□□□□□ -0.33
UBR1-207	ENST00000568782	MYOZ2	Q9NPC6	264 aa		12.97	□□□□□ -0.33
UBR1-207	ENST00000568782	CNTNAP1	P78357	1384 aa		12.96	□□□□□ -0.33
UBR1-207	ENST00000568782	TRAF5	O00463	557 aa		12.96	□□□□□ -0.33
UBR1-207	ENST00000568782	FRAT2	O75474	233 aa	Predicted RBP	12.96	□□□□□ -0.33
UBR1-207	ENST00000568782	GNAI3	P08754	354 aa		12.96	□□□□□ -0.33
UBR1-207	ENST00000568782	HIRA	P54198	1017 aa	Predicted RBP	12.96	□□□□□ -0.33
UBR1-207	ENST00000568782	RABL6	Q3YEC7	729 aa	Predicted RBP	12.96	□□□□□ -0.33
UBR1-207	ENST00000568782	CAVIN4	Q5BKX8	364 aa		12.96	□□□□□ -0.33
UBR1-207	ENST00000568782	C15orf52	Q6ZUT6	534 aa	Known RBP	12.96	□□□□□ -0.33
UBR1-207	ENST00000568782	USP48	Q86UV5	1035 aa		12.96	□□□□□ -0.33
UBR1-207	ENST00000568782	AIDA	Q96BJ3	306 aa		12.96	□□□□□ -0.33
UBR1-207	ENST00000568782		A0A1B0GUL6	1792 aa		12.95	□□□□□ -0.34
UBR1-207	ENST00000568782	SHTN1	A0MZ66	631 aa		12.95	□□□□□ -0.34
UBR1-207	ENST00000568782	ZNF280A	P59817	542 aa	Predicted RBP	12.95	□□□□□ -0.34
UBR1-207	ENST00000568782	SCARF1	Q14162	830 aa		12.95	□□□□□ -0.34
UBR1-207	ENST00000568782	DACT2	Q5SW24	774 aa		12.95	□□□□□ -0.34
UBR1-207	ENST00000568782	TXNRD3	Q86VQ6	643 aa		12.95	□□□□□ -0.34
UBR1-207	ENST00000568782	C2orf69	Q8N8R5	385 aa		12.95	□□□□□ -0.34
UBR1-207	ENST00000568782	BEGAIN	Q9BUH8	593 aa		12.95	□□□□□ -0.34
UBR1-207	ENST00000568782	ZNF609	O15014	1411 aa		12.95	□□□□□ -0.34
UBR1-207	ENST00000568782	WTIP	A6NIX2	430 aa	Predicted RBP	12.94	□□□□□ -0.34
UBR1-207	ENST00000568782	RASSF10	A6NK89	507 aa		12.94	□□□□□ -0.34
UBR1-207	ENST00000568782	MYO1B	O43795	1136 aa		12.94	□□□□□ -0.34
UBR1-207	ENST00000568782	HIBADH	P31937	336 aa	Known RBP	12.94	□□□□□ -0.34
UBR1-207	ENST00000568782	GRM1	Q13255	1194 aa		12.94	□□□□□ -0.34
UBR1-207	ENST00000568782	KAZALD1	Q96I82	304 aa		12.94	□□□□□ -0.34
UBR1-207	ENST00000568782	GGA3	Q9NZ52	723 aa		12.94	□□□□□ -0.34
UBR1-207	ENST00000568782	IFIT1	P09914	478 aa	Known RBP	12.93	□□□□□ -0.34
UBR1-207	ENST00000568782	IL1R1	P14778	569 aa		12.93	□□□□□ -0.34
UBR1-207	ENST00000568782	NF2	P35240	595 aa		12.93	□□□□□ -0.34
UBR1-207	ENST00000568782	VEGFB	P49765	207 aa		12.93	□□□□□ -0.34
UBR1-207	ENST00000568782	MAP2K1	Q02750	393 aa	Predicted RBP	12.93	□□□□□ -0.34
UBR1-207	ENST00000568782	ANGEL2	Q5VTE6	544 aa	Known RBP	12.93	□□□□□ -0.34
UBR1-207	ENST00000568782	ZKSCAN2	Q63HK3	967 aa		12.93	□□□□□ -0.34
UBR1-207	ENST00000568782	ATF7IP	Q6VMQ6	1270 aa		12.93	□□□□□ -0.34
UBR1-207	ENST00000568782	KIAA0825	Q8IV33	1275 aa		12.93	□□□□□ -0.34
UBR1-207	ENST00000568782	GML	Q99445	158 aa		12.93	□□□□□ -0.34
UBR1-207	ENST00000568782	PUS3	Q9BZE2	481 aa	Known RBP	12.93	□□□□□ -0.34
UBR1-207	ENST00000568782	FBXO3	Q9UK99	471 aa		12.93	□□□□□ -0.34
UBR1-207	ENST00000568782	RIPOR2	Q9Y4F9	1068 aa		12.93	□□□□□ -0.34
UBR1-207	ENST00000568782	TLL2	Q9Y6L7	1015 aa		12.93	□□□□□ -0.34
UBR1-207	ENST00000568782	ZBED9	Q6R2W3	1325 aa		12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	PITPNM2	Q9BZ72	1349 aa		12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	WDR33	Q9C0J8	1336 aa	Known RBP	12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	SNAP23	O00161	211 aa		12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	SASH1	O94885	1247 aa		12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	PDE8B	O95263	885 aa		12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	HSPA1A	P0DMV8	641 aa	Known RBP	12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	HSPA1B	P0DMV9	641 aa	Known RBP	12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	KLRK1	P26718	216 aa		12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	RBM5	P52756	815 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	FKBP1A	P62942	108 aa	Known RBP	12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	DLGAP5	Q15398	846 aa		12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	CST9	Q5W186	159 aa		12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	INTS3	Q68E01	1043 aa	Known RBP	12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	FTSJ3	Q8IY81	847 aa	Known RBP	12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	ANKRD44	Q8N8A2	993 aa		12.92	□□□□□ -0.34
UBR1-207	ENST00000568782	EYA2	O00167	538 aa		12.91	□□□□□ -0.34
UBR1-207	ENST00000568782	BCAR3	O75815	825 aa		12.91	□□□□□ -0.34
UBR1-207	ENST00000568782	EGFR	P00533	1210 aa		12.91	□□□□□ -0.34
UBR1-207	ENST00000568782	SLC5A1	P13866	664 aa		12.91	□□□□□ -0.34
UBR1-207	ENST00000568782	FMR1	Q06787	632 aa	Known RBP eCLIP	12.91	□□□□□ -0.34
UBR1-207	ENST00000568782	PUM3	Q15397	648 aa	Known RBP	12.91	□□□□□ -0.34
UBR1-207	ENST00000568782	LRRC24	Q50LG9	513 aa		12.91	□□□□□ -0.34
UBR1-207	ENST00000568782	HHIPL1	Q96JK4	782 aa		12.91	□□□□□ -0.34
UBR1-207	ENST00000568782	CAPNS2	Q96L46	248 aa		12.91	□□□□□ -0.34
UBR1-207	ENST00000568782	GBA2	Q9HCG7	927 aa	Predicted RBP	12.91	□□□□□ -0.34

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