RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 A0A1B0GUL7 405 aa9.45□□□□□ -0.9
SCAPER-221ENST00000568549 C6orf229H3BNL8 230 aa9.45□□□□□ -0.9
SCAPER-221ENST00000568549 SNAP23O00161 211 aa9.45□□□□□ -0.9
SCAPER-221ENST00000568549 SLC5A1P13866 664 aa9.45□□□□□ -0.9
SCAPER-221ENST00000568549 FGFR2P21802 821 aa9.45□□□□□ -0.9
SCAPER-221ENST00000568549 NUCB1Q02818 461 aa9.45□□□□□ -0.9
SCAPER-221ENST00000568549 UBE4AQ14139 1066 aa9.45□□□□□ -0.9
SCAPER-221ENST00000568549 AACSQ86V21 672 aa9.45□□□□□ -0.9
SCAPER-221ENST00000568549 CHD1LQ86WJ1 897 aa9.45□□□□□ -0.9
SCAPER-221ENST00000568549 TBC1D16Q8TBP0 767 aa9.45□□□□□ -0.9
SCAPER-221ENST00000568549 LPIN2Q92539 896 aa9.45□□□□□ -0.9
SCAPER-221ENST00000568549 WTIPA6NIX2 430 aaPredicted RBP9.44□□□□□ -0.9
SCAPER-221ENST00000568549 IFIT2P09913 472 aaKnown RBP9.44□□□□□ -0.9
SCAPER-221ENST00000568549 IFIT1P09914 478 aaKnown RBP9.44□□□□□ -0.9
SCAPER-221ENST00000568549 FKBP4Q02790 459 aaKnown RBP eCLIP9.44□□□□□ -0.9
SCAPER-221ENST00000568549 SUPT20HQ8NEM7 779 aa9.44□□□□□ -0.9
SCAPER-221ENST00000568549 EAF2Q96CJ1 260 aaPredicted RBP9.44□□□□□ -0.9
SCAPER-221ENST00000568549 NEUROD6Q96NK8 337 aa9.44□□□□□ -0.9
SCAPER-221ENST00000568549 GPR101Q96P66 508 aaPredicted RBP9.44□□□□□ -0.9
SCAPER-221ENST00000568549 PSMD1Q99460 953 aa9.44□□□□□ -0.9
SCAPER-221ENST00000568549 EYA3Q99504 573 aa9.44□□□□□ -0.9
SCAPER-221ENST00000568549 RTFDC1Q9BY42 306 aaPredicted RBP9.44□□□□□ -0.9
SCAPER-221ENST00000568549 LNPKQ9C0E8 428 aa9.44□□□□□ -0.9
SCAPER-221ENST00000568549 POLLQ9UGP5 575 aa9.44□□□□□ -0.9
SCAPER-221ENST00000568549 MED23Q9ULK4 1368 aa9.44□□□□□ -0.9
SCAPER-221ENST00000568549 PSME4Q14997 1843 aa9.43□□□□□ -0.9
SCAPER-221ENST00000568549 YBX3P16989 372 aaKnown RBP eCLIP9.43□□□□□ -0.9
SCAPER-221ENST00000568549 TIMM10P62072 90 aa9.43□□□□□ -0.9
SCAPER-221ENST00000568549 GPR162Q16538 588 aa9.43□□□□□ -0.9
SCAPER-221ENST00000568549 XAGE2Q96GT9 111 aa9.43□□□□□ -0.9
SCAPER-221ENST00000568549 CCDC8Q9H0W5 538 aaPredicted RBP9.43□□□□□ -0.9
SCAPER-221ENST00000568549 TAOK3Q9H2K8 898 aa9.43□□□□□ -0.9
SCAPER-221ENST00000568549 TLR7Q9NYK1 1049 aaKnown RBP9.43□□□□□ -0.9
SCAPER-221ENST00000568549 AK9Q5TCS8 1911 aa9.43□□□□□ -0.9
SCAPER-221ENST00000568549 AKAP11Q9UKA4 1901 aa9.43□□□□□ -0.9
SCAPER-221ENST00000568549 TIAM2Q8IVF5 1701 aa9.42□□□□□ -0.9
SCAPER-221ENST00000568549 LTBP3Q9NS15 1303 aa9.42□□□□□ -0.9
SCAPER-221ENST00000568549 IRS2Q9Y4H2 1338 aa9.42□□□□□ -0.9
SCAPER-221ENST00000568549 NFKBIEO00221 500 aa9.42□□□□□ -0.9
SCAPER-221ENST00000568549 RIMBP2O15034 1052 aa9.42□□□□□ -0.9
SCAPER-221ENST00000568549 KLRK1P26718 216 aa9.42□□□□□ -0.9
SCAPER-221ENST00000568549 ADORA1P30542 326 aa9.42□□□□□ -0.9
SCAPER-221ENST00000568549 RASSF7Q02833 373 aa9.42□□□□□ -0.9
SCAPER-221ENST00000568549 WASHC4Q2M389 1173 aa9.42□□□□□ -0.9
SCAPER-221ENST00000568549 CAVIN4Q5BKX8 364 aa9.42□□□□□ -0.9
SCAPER-221ENST00000568549 GORABQ5T7V8 394 aa9.42□□□□□ -0.9
SCAPER-221ENST00000568549 ARHGAP27Q6ZUM4 889 aa9.42□□□□□ -0.9
SCAPER-221ENST00000568549 C15orf52Q6ZUT6 534 aaKnown RBP9.42□□□□□ -0.9
SCAPER-221ENST00000568549 ZNF804AQ7Z570 1209 aa9.42□□□□□ -0.9
SCAPER-221ENST00000568549 C16orf71Q8IYS4 520 aaPredicted RBP9.42□□□□□ -0.9
SCAPER-221ENST00000568549 SP7Q8TDD2 431 aaPredicted RBP9.42□□□□□ -0.9
SCAPER-221ENST00000568549 DBNDD2Q9BQY9 259 aa9.42□□□□□ -0.9
SCAPER-221ENST00000568549 ZC3H12CQ9C0D7 883 aaKnown RBP9.42□□□□□ -0.9
SCAPER-221ENST00000568549 DBNLQ9UJU6 430 aaKnown RBP9.42□□□□□ -0.9
SCAPER-221ENST00000568549 G3V3G9 751 aa9.41□□□□□ -0.9
SCAPER-221ENST00000568549 PPIP5K2O43314 1243 aa9.41□□□□□ -0.9
SCAPER-221ENST00000568549 GYG1P46976 350 aa9.41□□□□□ -0.9
SCAPER-221ENST00000568549 KIAA2012Q0VF49 1180 aa9.41□□□□□ -0.9
SCAPER-221ENST00000568549 AOC3Q16853 763 aa9.41□□□□□ -0.9
SCAPER-221ENST00000568549 CCDC158Q5M9N0 1113 aa9.41□□□□□ -0.9
SCAPER-221ENST00000568549 TTC39AQ5SRH9 613 aa9.41□□□□□ -0.9
SCAPER-221ENST00000568549 DCAF8Q5TAQ9 597 aa9.41□□□□□ -0.9
SCAPER-221ENST00000568549 TXNRD3Q86VQ6 643 aa9.41□□□□□ -0.9
SCAPER-221ENST00000568549 VPS37DQ86XT2 251 aa9.41□□□□□ -0.9
SCAPER-221ENST00000568549 GPATCH3Q96I76 525 aa9.41□□□□□ -0.9
SCAPER-221ENST00000568549 FAM84BQ96KN1 310 aaPredicted RBP9.41□□□□□ -0.9
SCAPER-221ENST00000568549 VPS33BQ9H267 617 aa9.41□□□□□ -0.9
SCAPER-221ENST00000568549 ZNF277Q9NRM2 450 aaPredicted RBP9.41□□□□□ -0.9
SCAPER-221ENST00000568549 SCN9AQ15858 1988 aa9.41□□□□□ -0.9
SCAPER-221ENST00000568549 ZNF646O15015 1829 aaPredicted RBP9.4□□□□□ -0.9
SCAPER-221ENST00000568549 SALL3Q9BXA9 1300 aa9.4□□□□□ -0.9
SCAPER-221ENST00000568549 COL4A5P29400 1685 aa9.4□□□□□ -0.9
SCAPER-221ENST00000568549 GRIN3BO60391 1043 aa9.4□□□□□ -0.9
SCAPER-221ENST00000568549 MX1P20591 662 aa9.4□□□□□ -0.9
SCAPER-221ENST00000568549 PDE4AP27815 886 aa9.4□□□□□ -0.9
SCAPER-221ENST00000568549 HIBADHP31937 336 aaKnown RBP9.4□□□□□ -0.9
SCAPER-221ENST00000568549 IARSP41252 1262 aaKnown RBP9.4□□□□□ -0.9
SCAPER-221ENST00000568549 PHKA1P46020 1223 aa9.4□□□□□ -0.9
SCAPER-221ENST00000568549 BCAMP50895 628 aa9.4□□□□□ -0.9
SCAPER-221ENST00000568549 CCDC102BQ68D86 513 aa9.4□□□□□ -0.9
SCAPER-221ENST00000568549 LARGE2Q8N3Y3 721 aa9.4□□□□□ -0.9
SCAPER-221ENST00000568549 OTUD7AQ8TE49 926 aaPredicted RBP9.4□□□□□ -0.9
SCAPER-221ENST00000568549 GNL3LQ9NVN8 582 aaKnown RBP9.4□□□□□ -0.9
SCAPER-221ENST00000568549 MYH7P12883 1935 aa9.4□□□□□ -0.9
SCAPER-221ENST00000568549 MYO5AQ9Y4I1 1855 aaKnown RBP9.4□□□□□ -0.91
SCAPER-221ENST00000568549 TTC41PQ6P2S7 1318 aa9.39□□□□□ -0.91
SCAPER-221ENST00000568549 FRAT2O75474 233 aaPredicted RBP9.39□□□□□ -0.91
SCAPER-221ENST00000568549 UQCRFS1P1P0C7P4 283 aa9.39□□□□□ -0.91
SCAPER-221ENST00000568549 DOK7Q18PE1 504 aa9.39□□□□□ -0.91
SCAPER-221ENST00000568549 FBXO33Q7Z6M2 555 aa9.39□□□□□ -0.91
SCAPER-221ENST00000568549 COA1Q9GZY4 146 aa9.39□□□□□ -0.91
SCAPER-221ENST00000568549 ECHDC1Q9NTX5 307 aa9.39□□□□□ -0.91
SCAPER-221ENST00000568549 DOCK2Q92608 1830 aa9.39□□□□□ -0.91
SCAPER-221ENST00000568549 AOX1Q06278 1338 aa9.38□□□□□ -0.91
SCAPER-221ENST00000568549 ERC2O15083 957 aa9.38□□□□□ -0.91
SCAPER-221ENST00000568549 ECE2O60344 883 aa9.38□□□□□ -0.91
SCAPER-221ENST00000568549 IL1R1P14778 569 aa9.38□□□□□ -0.91
SCAPER-221ENST00000568549 ATP5JP18859 108 aa9.38□□□□□ -0.91
SCAPER-221ENST00000568549 LMNB1P20700 586 aa9.38□□□□□ -0.91
SCAPER-221ENST00000568549 ARID4AP29374 1257 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms