RNA–Protein interactions for RNA: ENST00000568359.1

SNX29-206, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-206ENST00000568359 EGFRP00533 1210 aa6.97□□□□□ -1.29
SNX29-206ENST00000568359 GPSM2P81274 684 aa6.97□□□□□ -1.29
SNX29-206ENST00000568359 TTLL12Q14166 644 aaPredicted RBP6.97□□□□□ -1.29
SNX29-206ENST00000568359 PDIA6Q15084 440 aa6.97□□□□□ -1.29
SNX29-206ENST00000568359 HDGFL1Q5TGJ6 251 aa6.97□□□□□ -1.29
SNX29-206ENST00000568359 PRPF38BQ5VTL8 546 aaKnown RBP6.97□□□□□ -1.29
SNX29-206ENST00000568359 PDE4DIPQ5VU43 2346 aa6.97□□□□□ -1.29
SNX29-206ENST00000568359 RETREG2Q8NC44 543 aa6.97□□□□□ -1.29
SNX29-206ENST00000568359 CELF1Q92879 486 aaKnown RBP6.97□□□□□ -1.29
SNX29-206ENST00000568359 CDCA5Q96FF9 252 aa6.97□□□□□ -1.29
SNX29-206ENST00000568359 FAM89AQ96GI7 184 aa6.97□□□□□ -1.29
SNX29-206ENST00000568359 ZC3H12CQ9C0D7 883 aaKnown RBP6.97□□□□□ -1.29
SNX29-206ENST00000568359 BABAM1Q9NWV8 329 aa6.97□□□□□ -1.29
SNX29-206ENST00000568359 CHPF2Q9P2E5 772 aa6.97□□□□□ -1.29
SNX29-206ENST00000568359 RTL9Q8NET4 1388 aa6.96□□□□□ -1.29
SNX29-206ENST00000568359 E9PSI1 815 aa6.96□□□□□ -1.3
SNX29-206ENST00000568359 ATP5J2-PTCD1G3V325 749 aa6.96□□□□□ -1.3
SNX29-206ENST00000568359 NF2P35240 595 aa6.96□□□□□ -1.3
SNX29-206ENST00000568359 NUBP1P53384 320 aa6.96□□□□□ -1.3
SNX29-206ENST00000568359 E2F4Q16254 413 aa6.96□□□□□ -1.3
SNX29-206ENST00000568359 ANGEL2Q5VTE6 544 aaKnown RBP6.96□□□□□ -1.3
SNX29-206ENST00000568359 LRP10Q7Z4F1 713 aa6.96□□□□□ -1.3
SNX29-206ENST00000568359 RASAL3Q86YV0 1011 aa6.96□□□□□ -1.3
SNX29-206ENST00000568359 PLBD2Q8NHP8 589 aa6.96□□□□□ -1.3
SNX29-206ENST00000568359 FBXW7Q969H0 707 aa6.96□□□□□ -1.3
SNX29-206ENST00000568359 POLLQ9UGP5 575 aa6.96□□□□□ -1.3
SNX29-206ENST00000568359 GGA1Q9UJY5 639 aa6.96□□□□□ -1.3
SNX29-206ENST00000568359 IRS4O14654 1257 aaPredicted RBP6.95□□□□□ -1.3
SNX29-206ENST00000568359 FKBP1BP68106 108 aa6.95□□□□□ -1.3
SNX29-206ENST00000568359 GOLGA2Q08379 1002 aa6.95□□□□□ -1.3
SNX29-206ENST00000568359 SCARF1Q14162 830 aa6.95□□□□□ -1.3
SNX29-206ENST00000568359 PKN2Q16513 984 aaKnown RBP6.95□□□□□ -1.3
SNX29-206ENST00000568359 CCDC152Q4G0S7 254 aa6.95□□□□□ -1.3
SNX29-206ENST00000568359 ANKRD13DQ6ZTN6 518 aa6.95□□□□□ -1.3
SNX29-206ENST00000568359 TBC1D16Q8TBP0 767 aa6.95□□□□□ -1.3
SNX29-206ENST00000568359 CSRNP1Q96S65 589 aa6.95□□□□□ -1.3
SNX29-206ENST00000568359 DBF4Q9UBU7 674 aaPredicted RBP6.95□□□□□ -1.3
SNX29-206ENST00000568359 HPS5Q9UPZ3 1129 aa6.95□□□□□ -1.3
SNX29-206ENST00000568359 COL4A1P02462 1669 aa6.95□□□□□ -1.3
SNX29-206ENST00000568359 MYH3P11055 1940 aa6.95□□□□□ -1.3
SNX29-206ENST00000568359 VIL1P09327 827 aaKnown RBP6.94□□□□□ -1.3
SNX29-206ENST00000568359 USP17L8P0C7I0 530 aa6.94□□□□□ -1.3
SNX29-206ENST00000568359 TMPOP42166 694 aaKnown RBP6.94□□□□□ -1.3
SNX29-206ENST00000568359 RPS8P62241 208 aaKnown RBP6.94□□□□□ -1.3
SNX29-206ENST00000568359 SF3B3Q15393 1217 aaKnown RBP6.94□□□□□ -1.3
SNX29-206ENST00000568359 KRT24Q2M2I5 525 aa6.94□□□□□ -1.3
SNX29-206ENST00000568359 RSBN1LQ6PCB5 846 aaPredicted RBP6.94□□□□□ -1.3
SNX29-206ENST00000568359 RIC3Q7Z5B4 369 aa6.94□□□□□ -1.3
SNX29-206ENST00000568359 OGFOD1Q8N543 542 aa6.94□□□□□ -1.3
SNX29-206ENST00000568359 AGBL3Q8NEM8 1001 aa6.94□□□□□ -1.3
SNX29-206ENST00000568359 MYOZ2Q9NPC6 264 aa6.94□□□□□ -1.3
SNX29-206ENST00000568359 KCNQ5Q9NR82 932 aa6.94□□□□□ -1.3
SNX29-206ENST00000568359 HYPKQ9NX55 129 aa6.94□□□□□ -1.3
SNX29-206ENST00000568359 ASTN2O75129 1339 aaPredicted RBP6.94□□□□□ -1.3
SNX29-206ENST00000568359 PITPNM2Q9BZ72 1349 aa6.94□□□□□ -1.3
SNX29-206ENST00000568359 TBC1D8O95759 1140 aa6.93□□□□□ -1.3
SNX29-206ENST00000568359 HOXB7P09629 217 aa6.93□□□□□ -1.3
SNX29-206ENST00000568359 SREBF2Q12772 1141 aa6.93□□□□□ -1.3
SNX29-206ENST00000568359 WDR43Q15061 677 aaKnown RBP eCLIP6.93□□□□□ -1.3
SNX29-206ENST00000568359 ANKRD18AQ8IVF6 992 aa6.93□□□□□ -1.3
SNX29-206ENST00000568359 CCDC146Q8IYE0 955 aa6.93□□□□□ -1.3
SNX29-206ENST00000568359 KRI1Q8N9T8 703 aaKnown RBP6.93□□□□□ -1.3
SNX29-206ENST00000568359 ZNF296Q8WUU4 475 aaPredicted RBP6.93□□□□□ -1.3
SNX29-206ENST00000568359 GCC1Q96CN9 775 aa6.93□□□□□ -1.3
SNX29-206ENST00000568359 CCDC85AQ96PX6 553 aaPredicted RBP6.93□□□□□ -1.3
SNX29-206ENST00000568359 SCAF8Q9UPN6 1271 aaKnown RBP6.93□□□□□ -1.3
SNX29-206ENST00000568359 XDHP47989 1333 aa6.93□□□□□ -1.3
SNX29-206ENST00000568359 ZNF609O15014 1411 aa6.93□□□□□ -1.3
SNX29-206ENST00000568359 USP17L3A6NCW0 530 aa6.92□□□□□ -1.3
SNX29-206ENST00000568359 USP17L4A6NCW7 530 aa6.92□□□□□ -1.3
SNX29-206ENST00000568359 UBE2Q2LH0YL09 131 aa6.92□□□□□ -1.3
SNX29-206ENST00000568359 ZNF280AP59817 542 aaPredicted RBP6.92□□□□□ -1.3
SNX29-206ENST00000568359 FBXO46Q6PJ61 603 aaPredicted RBP6.92□□□□□ -1.3
SNX29-206ENST00000568359 MOB2Q70IA6 237 aa6.92□□□□□ -1.3
SNX29-206ENST00000568359 USP17L1Q7RTZ2 530 aa6.92□□□□□ -1.3
SNX29-206ENST00000568359 ARMC9Q7Z3E5 817 aa6.92□□□□□ -1.3
SNX29-206ENST00000568359 ZBTB38Q8NAP3 1195 aaPredicted RBP6.92□□□□□ -1.3
SNX29-206ENST00000568359 CDC5LQ99459 802 aaKnown RBP6.92□□□□□ -1.3
SNX29-206ENST00000568359 MYD88Q99836 296 aa6.92□□□□□ -1.3
SNX29-206ENST00000568359 ISCA1Q9BUE6 129 aa6.92□□□□□ -1.3
SNX29-206ENST00000568359 SEC31BQ9NQW1 1179 aa6.92□□□□□ -1.3
SNX29-206ENST00000568359 SSUH2Q9Y2M2 353 aa6.92□□□□□ -1.3
SNX29-206ENST00000568359 ECM29Q5VYK3 1845 aa6.92□□□□□ -1.3
SNX29-206ENST00000568359 GPR25O00155 361 aa6.91□□□□□ -1.3
SNX29-206ENST00000568359 CHL1O00533 1208 aa6.91□□□□□ -1.3
SNX29-206ENST00000568359 PDE8AO60658 829 aa6.91□□□□□ -1.3
SNX29-206ENST00000568359 FKTNO75072 461 aa6.91□□□□□ -1.3
SNX29-206ENST00000568359 DDX58O95786 925 aaKnown RBP6.91□□□□□ -1.3
SNX29-206ENST00000568359 ATP2B4P23634 1241 aa6.91□□□□□ -1.3
SNX29-206ENST00000568359 PRKG1Q13976 671 aa6.91□□□□□ -1.3
SNX29-206ENST00000568359 PRAMEF18Q5VWM3 479 aa6.91□□□□□ -1.3
SNX29-206ENST00000568359 DUSP27Q5VZP5 1158 aa6.91□□□□□ -1.3
SNX29-206ENST00000568359 SMYD5Q6GMV2 418 aa6.91□□□□□ -1.3
SNX29-206ENST00000568359 PODNQ7Z5L7 613 aa6.91□□□□□ -1.3
SNX29-206ENST00000568359 APOBEC3FQ8IUX4 373 aaKnown RBP6.91□□□□□ -1.3
SNX29-206ENST00000568359 CWC25Q9NXE8 425 aaPredicted RBP6.91□□□□□ -1.3
SNX29-206ENST00000568359 MYO3BQ8WXR4 1341 aa6.91□□□□□ -1.3
SNX29-206ENST00000568359 MED23Q9ULK4 1368 aa6.91□□□□□ -1.3
SNX29-206ENST00000568359 RBBP6Q7Z6E9 1792 aaKnown RBP6.9□□□□□ -1.3
SNX29-206ENST00000568359 ZNF646O15015 1829 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms