RNA–Protein interactions for RNA: ENST00000568292.1

CDH3-207, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-207ENST00000568292 CDC37L1Q7L3B6 337 aa12.91□□□□□ -0.34
CDH3-207ENST00000568292 SAMD7Q7Z3H4 446 aa12.91□□□□□ -0.34
CDH3-207ENST00000568292 TRPM4Q8TD43 1214 aa12.91□□□□□ -0.34
CDH3-207ENST00000568292 MYH3P11055 1940 aa12.91□□□□□ -0.34
CDH3-207ENST00000568292 KIF16BQ96L93 1317 aa12.9□□□□□ -0.34
CDH3-207ENST00000568292 SHTN1A0MZ66 631 aa12.9□□□□□ -0.34
CDH3-207ENST00000568292 MMP14P50281 582 aa12.9□□□□□ -0.34
CDH3-207ENST00000568292 TTLL5Q6EMB2 1281 aa12.9□□□□□ -0.34
CDH3-207ENST00000568292 ANKRD44Q8N8A2 993 aa12.9□□□□□ -0.34
CDH3-207ENST00000568292 JMYQ8N9B5 988 aa12.9□□□□□ -0.34
CDH3-207ENST00000568292 FBXW7Q969H0 707 aa12.9□□□□□ -0.34
CDH3-207ENST00000568292 CD209Q9NNX6 404 aa12.9□□□□□ -0.34
CDH3-207ENST00000568292 RIPOR2Q9Y4F9 1068 aa12.9□□□□□ -0.34
CDH3-207ENST00000568292 LTBP1Q14766 1721 aa12.9□□□□□ -0.34
CDH3-207ENST00000568292 SNAP23O00161 211 aa12.89□□□□□ -0.35
CDH3-207ENST00000568292 BCAR3O75815 825 aa12.89□□□□□ -0.35
CDH3-207ENST00000568292 USP17L8P0C7I0 530 aa12.89□□□□□ -0.35
CDH3-207ENST00000568292 UBTFL1P0CB47 393 aaPredicted RBP12.89□□□□□ -0.35
CDH3-207ENST00000568292 UBE4AQ14139 1066 aa12.89□□□□□ -0.35
CDH3-207ENST00000568292 ZNF804AQ7Z570 1209 aa12.89□□□□□ -0.35
CDH3-207ENST00000568292 DCPSQ96C86 337 aaKnown RBP12.89□□□□□ -0.35
CDH3-207ENST00000568292 GMLQ99445 158 aa12.89□□□□□ -0.35
CDH3-207ENST00000568292 PUS3Q9BZE2 481 aaKnown RBP12.89□□□□□ -0.35
CDH3-207ENST00000568292 MROH5Q6ZUA9 1318 aa12.88□□□□□ -0.35
CDH3-207ENST00000568292 KLRK1P26718 216 aa12.88□□□□□ -0.35
CDH3-207ENST00000568292 ZNF280AP59817 542 aaPredicted RBP12.88□□□□□ -0.35
CDH3-207ENST00000568292 GTF2IP78347 998 aa12.88□□□□□ -0.35
CDH3-207ENST00000568292 KIF4BQ2VIQ3 1234 aa12.88□□□□□ -0.35
CDH3-207ENST00000568292 DEFB115Q30KQ5 88 aa12.88□□□□□ -0.35
CDH3-207ENST00000568292 DACT2Q5SW24 774 aa12.88□□□□□ -0.35
CDH3-207ENST00000568292 INTS3Q68E01 1043 aaKnown RBP12.88□□□□□ -0.35
CDH3-207ENST00000568292 USP48Q86UV5 1035 aa12.88□□□□□ -0.35
CDH3-207ENST00000568292 OGFOD1Q8N543 542 aa12.88□□□□□ -0.35
CDH3-207ENST00000568292 FRAT1Q92837 279 aaPredicted RBP12.88□□□□□ -0.35
CDH3-207ENST00000568292 MKRN1Q9UHC7 482 aaKnown RBP12.88□□□□□ -0.35
CDH3-207ENST00000568292 ADAMTSL1Q8N6G6 1762 aa12.88□□□□□ -0.35
CDH3-207ENST00000568292 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
CDH3-207ENST00000568292 TRAF5O00463 557 aa12.87□□□□□ -0.35
CDH3-207ENST00000568292 GNAI3P08754 354 aa12.87□□□□□ -0.35
CDH3-207ENST00000568292 IL1R1P14778 569 aa12.87□□□□□ -0.35
CDH3-207ENST00000568292 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDH3-207ENST00000568292 METTL24Q5JXM2 366 aa12.87□□□□□ -0.35
CDH3-207ENST00000568292 CST9Q5W186 159 aa12.87□□□□□ -0.35
CDH3-207ENST00000568292 ATF7IPQ6VMQ6 1270 aa12.87□□□□□ -0.35
CDH3-207ENST00000568292 GLIS2Q9BZE0 524 aaPredicted RBP12.87□□□□□ -0.35
CDH3-207ENST00000568292 ABT1Q9ULW3 272 aaKnown RBP12.87□□□□□ -0.35
CDH3-207ENST00000568292 ZBED9Q6R2W3 1325 aa12.87□□□□□ -0.35
CDH3-207ENST00000568292 EGFRP00533 1210 aa12.86□□□□□ -0.35
CDH3-207ENST00000568292 HIBADHP31937 336 aaKnown RBP12.86□□□□□ -0.35
CDH3-207ENST00000568292 SCARF1Q14162 830 aa12.86□□□□□ -0.35
CDH3-207ENST00000568292 LRRC24Q50LG9 513 aa12.86□□□□□ -0.35
CDH3-207ENST00000568292 KRT26Q7Z3Y9 468 aa12.86□□□□□ -0.35
CDH3-207ENST00000568292 MXD3Q9BW11 206 aa12.86□□□□□ -0.35
CDH3-207ENST00000568292 MYOZ2Q9NPC6 264 aa12.86□□□□□ -0.35
CDH3-207ENST00000568292 HDAC9Q9UKV0 1011 aa12.86□□□□□ -0.35
CDH3-207ENST00000568292 ZNF609O15014 1411 aa12.86□□□□□ -0.35
CDH3-207ENST00000568292 IRS2Q9Y4H2 1338 aa12.86□□□□□ -0.35
CDH3-207ENST00000568292 RASSF10A6NK89 507 aa12.85□□□□□ -0.35
CDH3-207ENST00000568292 SASH1O94885 1247 aa12.85□□□□□ -0.35
CDH3-207ENST00000568292 PDE8BO95263 885 aa12.85□□□□□ -0.35
CDH3-207ENST00000568292 CELF2O95319 508 aaKnown RBP12.85□□□□□ -0.35
CDH3-207ENST00000568292 RFX5P48382 616 aaPredicted RBP12.85□□□□□ -0.35
CDH3-207ENST00000568292 FKBP1AP62942 108 aaKnown RBP12.85□□□□□ -0.35
CDH3-207ENST00000568292 ZKSCAN2Q63HK3 967 aa12.85□□□□□ -0.35
CDH3-207ENST00000568292 SULF1Q8IWU6 871 aa12.85□□□□□ -0.35
CDH3-207ENST00000568292 KLHDC4Q8TBB5 520 aa12.85□□□□□ -0.35
CDH3-207ENST00000568292 CNTNAP1P78357 1384 aa12.84□□□□□ -0.35
CDH3-207ENST00000568292 SPEF2Q9C093 1822 aa12.84□□□□□ -0.35
CDH3-207ENST00000568292 EYA2O00167 538 aa12.84□□□□□ -0.35
CDH3-207ENST00000568292 TRIM27P14373 513 aa12.84□□□□□ -0.35
CDH3-207ENST00000568292 VEGFBP49765 207 aa12.84□□□□□ -0.35
CDH3-207ENST00000568292 PTPN12Q05209 780 aaKnown RBP12.84□□□□□ -0.35
CDH3-207ENST00000568292 CAVIN4Q5BKX8 364 aa12.84□□□□□ -0.35
CDH3-207ENST00000568292 TDRD7Q8NHU6 1098 aaKnown RBP12.84□□□□□ -0.35
CDH3-207ENST00000568292 FAM84BQ96KN1 310 aaPredicted RBP12.84□□□□□ -0.35
CDH3-207ENST00000568292 MEIS3Q99687 375 aa12.84□□□□□ -0.35
CDH3-207ENST00000568292 ZNF408Q9H9D4 720 aa12.84□□□□□ -0.35
CDH3-207ENST00000568292 FBXO3Q9UK99 471 aa12.84□□□□□ -0.35
CDH3-207ENST00000568292 LRRFIP2Q9Y608 721 aaKnown RBP12.84□□□□□ -0.35
CDH3-207ENST00000568292 TLL2Q9Y6L7 1015 aa12.84□□□□□ -0.35
CDH3-207ENST00000568292 GYG1P46976 350 aa12.83□□□□□ -0.36
CDH3-207ENST00000568292 ANGEL2Q5VTE6 544 aaKnown RBP12.83□□□□□ -0.36
CDH3-207ENST00000568292 FBXO33Q7Z6M2 555 aa12.83□□□□□ -0.36
CDH3-207ENST00000568292 VPS37DQ86XT2 251 aa12.83□□□□□ -0.36
CDH3-207ENST00000568292 KIAA0825Q8IV33 1275 aa12.83□□□□□ -0.36
CDH3-207ENST00000568292 CLUAP1Q96AJ1 413 aa12.83□□□□□ -0.36
CDH3-207ENST00000568292 GGA3Q9NZ52 723 aa12.83□□□□□ -0.36
CDH3-207ENST00000568292 CIAO1O76071 339 aa12.82□□□□□ -0.36
CDH3-207ENST00000568292 IFIT1P09914 478 aaKnown RBP12.82□□□□□ -0.36
CDH3-207ENST00000568292 ECE1P42892 770 aa12.82□□□□□ -0.36
CDH3-207ENST00000568292 C2orf69Q8N8R5 385 aa12.82□□□□□ -0.36
CDH3-207ENST00000568292 CEP126Q9P2H0 1117 aa12.82□□□□□ -0.36
CDH3-207ENST00000568292 FAM205AQ6ZU69 1335 aa12.82□□□□□ -0.36
CDH3-207ENST00000568292 PITPNM2Q9BZ72 1349 aa12.82□□□□□ -0.36
CDH3-207ENST00000568292 SCN9AQ15858 1988 aa12.81□□□□□ -0.36
CDH3-207ENST00000568292 ADM5C9JUS6 153 aa12.81□□□□□ -0.36
CDH3-207ENST00000568292 WNT10BO00744 389 aa12.81□□□□□ -0.36
CDH3-207ENST00000568292 FRAT2O75474 233 aaPredicted RBP12.81□□□□□ -0.36
CDH3-207ENST00000568292 GNAI2P04899 355 aa12.81□□□□□ -0.36
CDH3-207ENST00000568292 DLGAP5Q15398 846 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms