RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 PAXBP1Q9Y5B6 917 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 FPGT-TNNI3KV9GXZ4 949 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 PALLDQ8WX93 1383 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 BECN2A8MW95 431 aa8.96□□□□□ -0.98
ATXN3-250ENST00000568290 ERVV-2B6SEH9 535 aa8.96□□□□□ -0.98
ATXN3-250ENST00000568290 MYO1BO43795 1136 aa8.96□□□□□ -0.98
ATXN3-250ENST00000568290 KINO60870 393 aaKnown RBP8.96□□□□□ -0.98
ATXN3-250ENST00000568290 SASH1O94885 1247 aa8.96□□□□□ -0.98
ATXN3-250ENST00000568290 HCLS1P14317 486 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-250ENST00000568290 GTF2F1P35269 517 aaKnown RBP eCLIP8.96□□□□□ -0.98
ATXN3-250ENST00000568290 PTH1RQ03431 593 aa8.96□□□□□ -0.98
ATXN3-250ENST00000568290 SYCP1Q15431 976 aa8.96□□□□□ -0.98
ATXN3-250ENST00000568290 COPS6Q7L5N1 327 aa8.96□□□□□ -0.98
ATXN3-250ENST00000568290 FBXL16Q8N461 479 aa8.96□□□□□ -0.98
ATXN3-250ENST00000568290 JMYQ8N9B5 988 aa8.96□□□□□ -0.98
ATXN3-250ENST00000568290 CCDC191Q8NCU4 936 aa8.96□□□□□ -0.98
ATXN3-250ENST00000568290 XAGE3Q8WTP9 111 aa8.96□□□□□ -0.98
ATXN3-250ENST00000568290 UPF1Q92900 1129 aaKnown RBP eCLIP8.96□□□□□ -0.98
ATXN3-250ENST00000568290 EAF2Q96CJ1 260 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-250ENST00000568290 ZNF274Q96GC6 653 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-250ENST00000568290 MYD88Q99836 296 aa8.96□□□□□ -0.98
ATXN3-250ENST00000568290 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.96□□□□□ -0.98
ATXN3-250ENST00000568290 CCDC8Q9H0W5 538 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-250ENST00000568290 CLSTN2Q9H4D0 955 aa8.96□□□□□ -0.98
ATXN3-250ENST00000568290 CWC25Q9NXE8 425 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-250ENST00000568290 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.96□□□□□ -0.98
ATXN3-250ENST00000568290 ADAMTS7Q9UKP4 1686 aa8.96□□□□□ -0.98
ATXN3-250ENST00000568290 WDR19Q8NEZ3 1342 aa8.96□□□□□ -0.98
ATXN3-250ENST00000568290 A0A087WZG4 1122 aa8.95□□□□□ -0.98
ATXN3-250ENST00000568290 GADD45BO75293 160 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-250ENST00000568290 TAF5LO75529 589 aa8.95□□□□□ -0.98
ATXN3-250ENST00000568290 CDKL5O76039 1030 aa8.95□□□□□ -0.98
ATXN3-250ENST00000568290 GSDMDP57764 484 aa8.95□□□□□ -0.98
ATXN3-250ENST00000568290 XPCQ01831 940 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-250ENST00000568290 TYRO3Q06418 890 aa8.95□□□□□ -0.98
ATXN3-250ENST00000568290 TTF1Q15361 905 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-250ENST00000568290 STX1AQ16623 288 aa8.95□□□□□ -0.98
ATXN3-250ENST00000568290 CWF19L2Q2TBE0 894 aaKnown RBP8.95□□□□□ -0.98
ATXN3-250ENST00000568290 HSP90AB3PQ58FF7 597 aa8.95□□□□□ -0.98
ATXN3-250ENST00000568290 LRRC59Q96AG4 307 aaKnown RBP8.95□□□□□ -0.98
ATXN3-250ENST00000568290 HOOK1Q9UJC3 728 aaKnown RBP8.95□□□□□ -0.98
ATXN3-250ENST00000568290 TPCN1Q9ULQ1 816 aa8.95□□□□□ -0.98
ATXN3-250ENST00000568290 PCDH11XQ9BZA7 1347 aa8.95□□□□□ -0.98
ATXN3-250ENST00000568290 PCDH11YQ9BZA8 1340 aa8.95□□□□□ -0.98
ATXN3-250ENST00000568290 SPDYE16A6NNV3 312 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-250ENST00000568290 PFKFB2O60825 505 aa8.94□□□□□ -0.98
ATXN3-250ENST00000568290 HOXB1P14653 301 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-250ENST00000568290 TRDNQ13061 729 aa8.94□□□□□ -0.98
ATXN3-250ENST00000568290 IMMTQ16891 758 aaKnown RBP8.94□□□□□ -0.98
ATXN3-250ENST00000568290 GORABQ5T7V8 394 aa8.94□□□□□ -0.98
ATXN3-250ENST00000568290 RBM43Q6ZSC3 357 aaKnown RBP8.94□□□□□ -0.98
ATXN3-250ENST00000568290 BRAPQ7Z569 592 aa8.94□□□□□ -0.98
ATXN3-250ENST00000568290 CEP57L1Q8IYX8 460 aa8.94□□□□□ -0.98
ATXN3-250ENST00000568290 TDRD7Q8NHU6 1098 aaKnown RBP8.94□□□□□ -0.98
ATXN3-250ENST00000568290 KCNG4Q8TDN1 519 aa8.94□□□□□ -0.98
ATXN3-250ENST00000568290 LEO1Q8WVC0 666 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-250ENST00000568290 FUCA2Q9BTY2 467 aa8.94□□□□□ -0.98
ATXN3-250ENST00000568290 TRIM5Q9C035 493 aa8.94□□□□□ -0.98
ATXN3-250ENST00000568290 GDPD2Q9HCC8 539 aa8.94□□□□□ -0.98
ATXN3-250ENST00000568290 CEP126Q9P2H0 1117 aa8.94□□□□□ -0.98
ATXN3-250ENST00000568290 PA2G4Q9UQ80 394 aaKnown RBP8.94□□□□□ -0.98
ATXN3-250ENST00000568290 TMEM94Q12767 1356 aa8.94□□□□□ -0.98
ATXN3-250ENST00000568290 C1orf167Q5SNV9 1468 aa8.94□□□□□ -0.98
ATXN3-250ENST00000568290 SMTNL1A8MU46 457 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 IGKV5-2P06315 115 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 MYL6BP14649 208 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 PTGER2P43116 358 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 ZNF165P49910 485 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 SF3A1Q15459 793 aaKnown RBP8.93□□□□□ -0.98
ATXN3-250ENST00000568290 ADCK5Q3MIX3 580 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 FOXD4L6Q3SYB3 417 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-250ENST00000568290 ARSIQ5FYB1 569 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 TMED8Q6PL24 325 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-250ENST00000568290 SARM1Q6SZW1 724 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 FOXD4L3Q6VB84 417 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-250ENST00000568290 Q6ZUG5 572 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 SMARCC2Q8TAQ2 1214 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 KHSRPQ92945 711 aaKnown RBP eCLIP8.93□□□□□ -0.98
ATXN3-250ENST00000568290 MRFAP1L1Q96HT8 127 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 SIL1Q9H173 461 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 PAG1Q9NWQ8 432 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 FAM13BQ9NYF5 915 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 IMPACTQ9P2X3 320 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 NSFL1CQ9UNZ2 370 aaKnown RBP8.93□□□□□ -0.98
ATXN3-250ENST00000568290 CPDO75976 1380 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 SPEF2Q9C093 1822 aa8.93□□□□□ -0.98
ATXN3-250ENST00000568290 A0A0D9SFI3 127 aa8.92□□□□□ -0.98
ATXN3-250ENST00000568290 A0A1W2PQ27 194 aa8.92□□□□□ -0.98
ATXN3-250ENST00000568290 A0A1W2PQ64 194 aa8.92□□□□□ -0.98
ATXN3-250ENST00000568290 A0A1W2PQD8 194 aa8.92□□□□□ -0.98
ATXN3-250ENST00000568290 TESPA1A2RU30 521 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-250ENST00000568290 H7C1W4 665 aa8.92□□□□□ -0.98
ATXN3-250ENST00000568290 RNF113AO15541 343 aaKnown RBP8.92□□□□□ -0.98
ATXN3-250ENST00000568290 KCNQ3O43525 872 aa8.92□□□□□ -0.98
ATXN3-250ENST00000568290 EVI5O60447 810 aa8.92□□□□□ -0.98
ATXN3-250ENST00000568290 IFIT1P09914 478 aaKnown RBP8.92□□□□□ -0.98
ATXN3-250ENST00000568290 MAP3K9P80192 1104 aa8.92□□□□□ -0.98
ATXN3-250ENST00000568290 PTPN12Q05209 780 aaKnown RBP8.92□□□□□ -0.98
ATXN3-250ENST00000568290 CCDC57Q2TAC2 916 aa8.92□□□□□ -0.98
ATXN3-250ENST00000568290 TAF7LQ5H9L4 462 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms