RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 KRT26Q7Z3Y9 468 aa16.32■□□□□ 0.2
TSC2-220ENST00000568238 SAPCD2Q86UD0 394 aa16.32■□□□□ 0.2
TSC2-220ENST00000568238 USP48Q86UV5 1035 aa16.32■□□□□ 0.2
TSC2-220ENST00000568238 WBP1LQ9NX94 342 aa16.32■□□□□ 0.2
TSC2-220ENST00000568238 LEMD3Q9Y2U8 911 aa16.32■□□□□ 0.2
TSC2-220ENST00000568238 CHMP3Q9Y3E7 222 aa16.32■□□□□ 0.2
TSC2-220ENST00000568238 ZNF804BA4D1E1 1349 aa16.31■□□□□ 0.2
TSC2-220ENST00000568238 CTCFP49711 727 aaPredicted RBP16.31■□□□□ 0.2
TSC2-220ENST00000568238 ZNF280AP59817 542 aaPredicted RBP16.31■□□□□ 0.2
TSC2-220ENST00000568238 FOXO4P98177 505 aa16.31■□□□□ 0.2
TSC2-220ENST00000568238 MAP2K1Q02750 393 aaPredicted RBP16.31■□□□□ 0.2
TSC2-220ENST00000568238 IFIT5Q13325 482 aaKnown RBP16.31■□□□□ 0.2
TSC2-220ENST00000568238 SLC4A10Q6U841 1118 aa16.31■□□□□ 0.2
TSC2-220ENST00000568238 DCPSQ96C86 337 aaKnown RBP16.31■□□□□ 0.2
TSC2-220ENST00000568238 GGA3Q9NZ52 723 aa16.31■□□□□ 0.2
TSC2-220ENST00000568238 ALDH1L1O75891 902 aa16.3■□□□□ 0.2
TSC2-220ENST00000568238 USP17L8P0C7I0 530 aa16.3■□□□□ 0.2
TSC2-220ENST00000568238 KCNJ4P48050 445 aa16.3■□□□□ 0.2
TSC2-220ENST00000568238 CHRNDQ07001 517 aa16.3■□□□□ 0.2
TSC2-220ENST00000568238 HHIPL1Q96JK4 782 aa16.3■□□□□ 0.2
TSC2-220ENST00000568238 GMLQ99445 158 aa16.3■□□□□ 0.2
TSC2-220ENST00000568238 COA1Q9GZY4 146 aa16.3■□□□□ 0.2
TSC2-220ENST00000568238 C9orf78Q9NZ63 289 aaPredicted RBP16.3■□□□□ 0.2
TSC2-220ENST00000568238 ADM5C9JUS6 153 aa16.29■□□□□ 0.2
TSC2-220ENST00000568238 KLRK1P26718 216 aa16.29■□□□□ 0.2
TSC2-220ENST00000568238 SULF1Q8IWU6 871 aa16.29■□□□□ 0.2
TSC2-220ENST00000568238 TRMT2AQ8IZ69 625 aaKnown RBP16.29■□□□□ 0.2
TSC2-220ENST00000568238 FBXW7Q969H0 707 aa16.29■□□□□ 0.2
TSC2-220ENST00000568238 SRCIN1Q9C0H9 1055 aa16.29■□□□□ 0.2
TSC2-220ENST00000568238 MYO3BQ8WXR4 1341 aa16.28■□□□□ 0.2
TSC2-220ENST00000568238 DACT2Q5SW24 774 aa16.28■□□□□ 0.2
TSC2-220ENST00000568238 LMBR1LQ6UX01 489 aa16.28■□□□□ 0.2
TSC2-220ENST00000568238 TXNRD3Q86VQ6 643 aa16.28■□□□□ 0.2
TSC2-220ENST00000568238 MYOZ2Q9NPC6 264 aa16.28■□□□□ 0.2
TSC2-220ENST00000568238 PRDM10Q9NQV6 1147 aa16.28■□□□□ 0.2
TSC2-220ENST00000568238 ASTN2O75129 1339 aaPredicted RBP16.27■□□□□ 0.2
TSC2-220ENST00000568238 CCDC57Q2TAC2 916 aa16.27■□□□□ 0.2
TSC2-220ENST00000568238 TAF7LQ5H9L4 462 aa16.27■□□□□ 0.2
TSC2-220ENST00000568238 EPHA10Q5JZY3 1008 aa16.27■□□□□ 0.2
TSC2-220ENST00000568238 STRIP1Q5VSL9 837 aa16.27■□□□□ 0.2
TSC2-220ENST00000568238 ANGEL2Q5VTE6 544 aaKnown RBP16.27■□□□□ 0.2
TSC2-220ENST00000568238 DLK2Q6UY11 383 aa16.27■□□□□ 0.2
TSC2-220ENST00000568238 BEGAINQ9BUH8 593 aa16.27■□□□□ 0.2
TSC2-220ENST00000568238 PTPRCP08575 1304 aa16.26■□□□□ 0.19
TSC2-220ENST00000568238 AOC2O75106 756 aa16.26■□□□□ 0.19
TSC2-220ENST00000568238 MAP2K2P36507 400 aa16.26■□□□□ 0.19
TSC2-220ENST00000568238 HUNKP57058 714 aa16.26■□□□□ 0.19
TSC2-220ENST00000568238 SCARF1Q14162 830 aa16.26■□□□□ 0.19
TSC2-220ENST00000568238 MRPL50Q8N5N7 158 aaKnown RBP16.26■□□□□ 0.19
TSC2-220ENST00000568238 MXD3Q9BW11 206 aa16.26■□□□□ 0.19
TSC2-220ENST00000568238 GBA2Q9HCG7 927 aaPredicted RBP16.26■□□□□ 0.19
TSC2-220ENST00000568238 PAPPA2Q9BXP8 1791 aa16.26■□□□□ 0.19
TSC2-220ENST00000568238 PITPNM2Q9BZ72 1349 aa16.25■□□□□ 0.19
TSC2-220ENST00000568238 ECM29Q5VYK3 1845 aa16.25■□□□□ 0.19
TSC2-220ENST00000568238 TAF5LO75529 589 aa16.25■□□□□ 0.19
TSC2-220ENST00000568238 LBX1P52954 281 aa16.25■□□□□ 0.19
TSC2-220ENST00000568238 OGFOD1Q8N543 542 aa16.25■□□□□ 0.19
TSC2-220ENST00000568238 C2orf69Q8N8R5 385 aa16.25■□□□□ 0.19
TSC2-220ENST00000568238 IRS2Q9Y4H2 1338 aa16.24■□□□□ 0.19
TSC2-220ENST00000568238 SNAP23O00161 211 aa16.24■□□□□ 0.19
TSC2-220ENST00000568238 HSPA8P11142 646 aaKnown RBP16.24■□□□□ 0.19
TSC2-220ENST00000568238 TTLL5Q6EMB2 1281 aa16.24■□□□□ 0.19
TSC2-220ENST00000568238 LDHAL6AQ6ZMR3 332 aa16.24■□□□□ 0.19
TSC2-220ENST00000568238 HELBQ8NG08 1087 aaPredicted RBP16.24■□□□□ 0.19
TSC2-220ENST00000568238 SSH1Q8WYL5 1049 aa16.24■□□□□ 0.19
TSC2-220ENST00000568238 CDCA5Q96FF9 252 aa16.24■□□□□ 0.19
TSC2-220ENST00000568238 SUCLG2Q96I99 432 aa16.24■□□□□ 0.19
TSC2-220ENST00000568238 ZNF594Q96JF6 807 aaPredicted RBP16.24■□□□□ 0.19
TSC2-220ENST00000568238 CNNM1Q9NRU3 951 aa16.24■□□□□ 0.19
TSC2-220ENST00000568238 ARAP2Q8WZ64 1704 aa16.24■□□□□ 0.19
TSC2-220ENST00000568238 UTYO14607 1347 aa16.23■□□□□ 0.19
TSC2-220ENST00000568238 MMP14P50281 582 aa16.23■□□□□ 0.19
TSC2-220ENST00000568238 C15orf52Q6ZUT6 534 aaKnown RBP16.23■□□□□ 0.19
TSC2-220ENST00000568238 CD209Q9NNX6 404 aa16.23■□□□□ 0.19
TSC2-220ENST00000568238 CAPN15O75808 1086 aa16.22■□□□□ 0.19
TSC2-220ENST00000568238 NBPF7P0C2Y1 421 aaPredicted RBP16.22■□□□□ 0.19
TSC2-220ENST00000568238 BRPF1P55201 1214 aaPredicted RBP16.22■□□□□ 0.19
TSC2-220ENST00000568238 GTF2IP78347 998 aa16.22■□□□□ 0.19
TSC2-220ENST00000568238 NOGQ13253 232 aa16.22■□□□□ 0.19
TSC2-220ENST00000568238 ZNF804AQ7Z570 1209 aa16.22■□□□□ 0.19
TSC2-220ENST00000568238 NBPF9Q3BBW0 867 aa16.21■□□□□ 0.19
TSC2-220ENST00000568238 ALDH1L2Q3SY69 923 aa16.21■□□□□ 0.19
TSC2-220ENST00000568238 RGMBQ6NW40 437 aa16.21■□□□□ 0.19
TSC2-220ENST00000568238 KIAA0825Q8IV33 1275 aa16.21■□□□□ 0.19
TSC2-220ENST00000568238 KAZALD1Q96I82 304 aa16.21■□□□□ 0.19
TSC2-220ENST00000568238 BICC1Q9H694 974 aaKnown RBP16.21■□□□□ 0.19
TSC2-220ENST00000568238 SMC4Q9NTJ3 1288 aa16.21■□□□□ 0.19
TSC2-220ENST00000568238 HDAC9Q9UKV0 1011 aa16.21■□□□□ 0.19
TSC2-220ENST00000568238 AKAP11Q9UKA4 1901 aa16.21■□□□□ 0.19
TSC2-220ENST00000568238 WNT10BO00744 389 aa16.2■□□□□ 0.18
TSC2-220ENST00000568238 CA12O43570 354 aa16.2■□□□□ 0.18
TSC2-220ENST00000568238 PLIN1O60240 522 aa16.2■□□□□ 0.18
TSC2-220ENST00000568238 SASH1O94885 1247 aa16.2■□□□□ 0.18
TSC2-220ENST00000568238 IL1R1P14778 569 aa16.19■□□□□ 0.18
TSC2-220ENST00000568238 RABL6Q3YEC7 729 aaPredicted RBP16.19■□□□□ 0.18
TSC2-220ENST00000568238 CCDC102AQ96A19 550 aa16.19■□□□□ 0.18
TSC2-220ENST00000568238 SCAF8Q9UPN6 1271 aaKnown RBP16.19■□□□□ 0.18
TSC2-220ENST00000568238 FAM155AB1AL88 458 aaPredicted RBP16.18■□□□□ 0.18
TSC2-220ENST00000568238 CT47B1P0C2W7 299 aaPredicted RBP16.18■□□□□ 0.18
TSC2-220ENST00000568238 ZNF157P51786 506 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms