RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 PBX4Q9BYU1 374 aa7□□□□□ -1.29
HERPUD1-212ENST00000567944 PNMA6FA0A0J9YX94 578 aa6.99□□□□□ -1.29
HERPUD1-212ENST00000567944 A0A1W2PP55 124 aa6.99□□□□□ -1.29
HERPUD1-212ENST00000567944 NEFLP07196 543 aa6.99□□□□□ -1.29
HERPUD1-212ENST00000567944 PI16Q6UXB8 463 aa6.99□□□□□ -1.29
HERPUD1-212ENST00000567944 FBXO33Q7Z6M2 555 aa6.99□□□□□ -1.29
HERPUD1-212ENST00000567944 EPS8L3Q8TE67 593 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-212ENST00000567944 TRIM11Q96F44 468 aa6.99□□□□□ -1.29
HERPUD1-212ENST00000567944 DCAF5Q96JK2 942 aa6.99□□□□□ -1.29
HERPUD1-212ENST00000567944 POP1Q99575 1024 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-212ENST00000567944 JPH1Q9HDC5 661 aaPredicted RBP6.99□□□□□ -1.29
HERPUD1-212ENST00000567944 TRIM33Q9UPN9 1127 aa6.99□□□□□ -1.29
HERPUD1-212ENST00000567944 RGS9O75916 674 aaPredicted RBP6.98□□□□□ -1.29
HERPUD1-212ENST00000567944 GHRHP01286 108 aa6.98□□□□□ -1.29
HERPUD1-212ENST00000567944 EDN3P14138 238 aa6.98□□□□□ -1.29
HERPUD1-212ENST00000567944 TAGLNQ01995 201 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-212ENST00000567944 COL19A1Q14993 1142 aa6.98□□□□□ -1.29
HERPUD1-212ENST00000567944 OSMRQ99650 979 aa6.98□□□□□ -1.29
HERPUD1-212ENST00000567944 SUV39H2Q9H5I1 410 aa6.98□□□□□ -1.29
HERPUD1-212ENST00000567944 RRAGCQ9HB90 399 aa6.98□□□□□ -1.29
HERPUD1-212ENST00000567944 NPHS2Q9NP85 383 aa6.98□□□□□ -1.29
HERPUD1-212ENST00000567944 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-212ENST00000567944 LILRB5O75023 590 aa6.97□□□□□ -1.29
HERPUD1-212ENST00000567944 PROCP04070 461 aa6.97□□□□□ -1.29
HERPUD1-212ENST00000567944 MAPK8P45983 427 aa6.97□□□□□ -1.29
HERPUD1-212ENST00000567944 KIAA0319Q5VV43 1072 aa6.97□□□□□ -1.29
HERPUD1-212ENST00000567944 NXPE3Q969Y0 559 aa6.97□□□□□ -1.29
HERPUD1-212ENST00000567944 TCF12Q99081 682 aa6.97□□□□□ -1.29
HERPUD1-212ENST00000567944 RNF19AQ9NV58 838 aa6.97□□□□□ -1.29
HERPUD1-212ENST00000567944 CEP135Q66GS9 1140 aa6.96□□□□□ -1.3
HERPUD1-212ENST00000567944 TMEM102Q8N9M5 508 aaPredicted RBP6.96□□□□□ -1.3
HERPUD1-212ENST00000567944 GLIS3Q8NEA6 775 aa6.96□□□□□ -1.3
HERPUD1-212ENST00000567944 SPACA7Q96KW9 195 aa6.96□□□□□ -1.3
HERPUD1-212ENST00000567944 PSMG3-AS1Q96PY0 264 aa6.96□□□□□ -1.3
HERPUD1-212ENST00000567944 KRTAP9-2Q9BYQ4 174 aa6.96□□□□□ -1.3
HERPUD1-212ENST00000567944 BHLHE41Q9C0J9 482 aaPredicted RBP6.96□□□□□ -1.3
HERPUD1-212ENST00000567944 METTL12A8MUP2 240 aa6.95□□□□□ -1.3
HERPUD1-212ENST00000567944 PDE2AO00408 941 aaPredicted RBP6.95□□□□□ -1.3
HERPUD1-212ENST00000567944 TM4SF5O14894 197 aa6.95□□□□□ -1.3
HERPUD1-212ENST00000567944 CCNJLQ8IV13 435 aa6.95□□□□□ -1.3
HERPUD1-212ENST00000567944 ADAM19Q9H013 955 aa6.95□□□□□ -1.3
HERPUD1-212ENST00000567944 MKL2Q9ULH7 1088 aa6.95□□□□□ -1.3
HERPUD1-212ENST00000567944 GNB5O14775 395 aa6.94□□□□□ -1.3
HERPUD1-212ENST00000567944 LDHBP07195 334 aaKnown RBP6.94□□□□□ -1.3
HERPUD1-212ENST00000567944 ERCC3P19447 782 aa6.94□□□□□ -1.3
HERPUD1-212ENST00000567944 COL8A1P27658 744 aa6.94□□□□□ -1.3
HERPUD1-212ENST00000567944 GRM2Q14416 872 aa6.94□□□□□ -1.3
HERPUD1-212ENST00000567944 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.94□□□□□ -1.3
HERPUD1-212ENST00000567944 MSL1Q68DK7 614 aa6.94□□□□□ -1.3
HERPUD1-212ENST00000567944 GDF6Q6KF10 455 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-212ENST00000567944 Q8N3U1 123 aa6.94□□□□□ -1.3
HERPUD1-212ENST00000567944 BEND7Q8N7W2 519 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-212ENST00000567944 RGS22Q8NE09 1264 aa6.94□□□□□ -1.3
HERPUD1-212ENST00000567944 PLVAPQ9BX97 442 aa6.94□□□□□ -1.3
HERPUD1-212ENST00000567944 RBSNQ9H1K0 784 aa6.94□□□□□ -1.3
HERPUD1-212ENST00000567944 SH2B1Q9NRF2 756 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-212ENST00000567944 KRTAP9-6A0A140TA67 174 aa6.93□□□□□ -1.3
HERPUD1-212ENST00000567944 K7ELQ4 463 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-212ENST00000567944 SMNDC1O75940 238 aaKnown RBP eCLIP6.93□□□□□ -1.3
HERPUD1-212ENST00000567944 GRIA4P48058 902 aa6.93□□□□□ -1.3
HERPUD1-212ENST00000567944 EAPPQ56P03 285 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-212ENST00000567944 FBF1Q8TES7 1133 aa6.93□□□□□ -1.3
HERPUD1-212ENST00000567944 LACRTQ9GZZ8 138 aa6.93□□□□□ -1.3
HERPUD1-212ENST00000567944 SOX13Q9UN79 622 aa6.93□□□□□ -1.3
HERPUD1-212ENST00000567944 PRPF40AO75400 957 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-212ENST00000567944 EPHA1P21709 976 aa6.92□□□□□ -1.3
HERPUD1-212ENST00000567944 SPRED3Q2MJR0 410 aa6.92□□□□□ -1.3
HERPUD1-212ENST00000567944 VN1R5Q7Z5H4 357 aa6.92□□□□□ -1.3
HERPUD1-212ENST00000567944 DMRTC2Q8IXT2 367 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-212ENST00000567944 IL22RA1Q8N6P7 574 aa6.92□□□□□ -1.3
HERPUD1-212ENST00000567944 OSBPL7Q9BZF2 842 aa6.92□□□□□ -1.3
HERPUD1-212ENST00000567944 LIN7BQ9HAP6 207 aa6.92□□□□□ -1.3
HERPUD1-212ENST00000567944 ABCB6Q9NP58 842 aa6.92□□□□□ -1.3
HERPUD1-212ENST00000567944 DEAF1O75398 565 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-212ENST00000567944 ALG1LQ6GMV1 187 aa6.91□□□□□ -1.3
HERPUD1-212ENST00000567944 PRPF40BQ6NWY9 871 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-212ENST00000567944 DUSP9Q99956 384 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-212ENST00000567944 BCO2Q9BYV7 579 aa6.91□□□□□ -1.3
HERPUD1-212ENST00000567944 MUC3BQ9H195 1237 aa6.91□□□□□ -1.3
HERPUD1-212ENST00000567944 EHD4Q9H223 541 aa6.91□□□□□ -1.3
HERPUD1-212ENST00000567944 FAM229AH3BQW9 127 aa6.9□□□□□ -1.3
HERPUD1-212ENST00000567944 PTPRAP18433 802 aa6.9□□□□□ -1.3
HERPUD1-212ENST00000567944 CDC27P30260 824 aa6.9□□□□□ -1.3
HERPUD1-212ENST00000567944 NXPE4Q6UWF7 544 aa6.9□□□□□ -1.3
HERPUD1-212ENST00000567944 PODNQ7Z5L7 613 aa6.9□□□□□ -1.3
HERPUD1-212ENST00000567944 WFDC8Q8IUA0 241 aa6.9□□□□□ -1.3
HERPUD1-212ENST00000567944 PODXL2Q9NZ53 605 aa6.9□□□□□ -1.3
HERPUD1-212ENST00000567944 A0A096LPE4 126 aa6.89□□□□□ -1.31
HERPUD1-212ENST00000567944 A0A0A0MRY4 1105 aa6.89□□□□□ -1.31
HERPUD1-212ENST00000567944 TMEM238LA0A1B0GVL6 79 aa6.89□□□□□ -1.31
HERPUD1-212ENST00000567944 A0A1W2PPZ6 126 aa6.89□□□□□ -1.31
HERPUD1-212ENST00000567944 GADD45BO75293 160 aaPredicted RBP6.89□□□□□ -1.31
HERPUD1-212ENST00000567944 ITPKAP23677 461 aa6.89□□□□□ -1.31
HERPUD1-212ENST00000567944 SETDB1Q15047 1291 aa6.89□□□□□ -1.31
HERPUD1-212ENST00000567944 TRAPPC3LQ5T215 181 aa6.89□□□□□ -1.31
HERPUD1-212ENST00000567944 HGSNATQ68CP4 663 aa6.89□□□□□ -1.31
HERPUD1-212ENST00000567944 TXNDC11Q6PKC3 985 aa6.89□□□□□ -1.31
HERPUD1-212ENST00000567944 CACTIN-AS1Q8N1I8 211 aa6.89□□□□□ -1.31
HERPUD1-212ENST00000567944 C3orf58Q8NDZ4 430 aa6.89□□□□□ -1.31
HERPUD1-212ENST00000567944 BSNDQ8WZ55 320 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms