RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 TTC39AQ5SRH9 613 aa12.71□□□□□ -0.37
TCF4-236ENST00000567880 SLC51AQ86UW1 340 aa12.71□□□□□ -0.37
TCF4-236ENST00000567880 LPIN2Q92539 896 aa12.71□□□□□ -0.37
TCF4-236ENST00000567880 DNAJC2Q99543 621 aaKnown RBP12.71□□□□□ -0.37
TCF4-236ENST00000567880 MYO5AQ9Y4I1 1855 aaKnown RBP12.71□□□□□ -0.38
TCF4-236ENST00000567880 KLRG2A4D1S0 409 aaPredicted RBP12.7□□□□□ -0.38
TCF4-236ENST00000567880 FGFR2P21802 821 aa12.7□□□□□ -0.38
TCF4-236ENST00000567880 CASC1Q6TDU7 716 aa12.7□□□□□ -0.38
TCF4-236ENST00000567880 PSDA5PKW4 1024 aaPredicted RBP12.7□□□□□ -0.38
TCF4-236ENST00000567880 WTIPA6NIX2 430 aaPredicted RBP12.7□□□□□ -0.38
TCF4-236ENST00000567880 IFIT1P09914 478 aaKnown RBP12.7□□□□□ -0.38
TCF4-236ENST00000567880 SRGNP10124 158 aa12.7□□□□□ -0.38
TCF4-236ENST00000567880 KCNJ4P48050 445 aa12.7□□□□□ -0.38
TCF4-236ENST00000567880 MFAP1P55081 439 aaKnown RBP12.7□□□□□ -0.38
TCF4-236ENST00000567880 EDC3Q96F86 508 aaKnown RBP12.7□□□□□ -0.38
TCF4-236ENST00000567880 MYH7P12883 1935 aa12.69□□□□□ -0.38
TCF4-236ENST00000567880 HOXA10P31260 410 aaPredicted RBP12.69□□□□□ -0.38
TCF4-236ENST00000567880 ANKIB1Q9P2G1 1089 aa12.69□□□□□ -0.38
TCF4-236ENST00000567880 NPR1P16066 1061 aa12.68□□□□□ -0.38
TCF4-236ENST00000567880 PHKA1P46020 1223 aa12.68□□□□□ -0.38
TCF4-236ENST00000567880 CCDC102BQ68D86 513 aa12.68□□□□□ -0.38
TCF4-236ENST00000567880 C2CD5Q86YS7 1000 aa12.68□□□□□ -0.38
TCF4-236ENST00000567880 ZNF622Q969S3 477 aaKnown RBP eCLIP12.68□□□□□ -0.385e-7■□□□□ 11.2
TCF4-236ENST00000567880 EVI5LQ96CN4 794 aa12.68□□□□□ -0.38
TCF4-236ENST00000567880 CRAMP1Q96RY5 1269 aa12.68□□□□□ -0.38
TCF4-236ENST00000567880 HAUS7Q99871 368 aa12.68□□□□□ -0.38
TCF4-236ENST00000567880 ANKRD2Q9GZV1 360 aa12.68□□□□□ -0.38
TCF4-236ENST00000567880 SLX4Q8IY92 1834 aa12.68□□□□□ -0.38
TCF4-236ENST00000567880 FKBP4Q02790 459 aaKnown RBP eCLIP12.68□□□□□ -0.38
TCF4-236ENST00000567880 MASTLQ96GX5 879 aa12.68□□□□□ -0.38
TCF4-236ENST00000567880 FSD1Q9BTV5 496 aa12.68□□□□□ -0.38
TCF4-236ENST00000567880 SNRKQ9NRH2 765 aa12.68□□□□□ -0.38
TCF4-236ENST00000567880 LRRC37AA6NMS7 1700 aa12.67□□□□□ -0.38
TCF4-236ENST00000567880 H0YIN7 160 aa12.67□□□□□ -0.38
TCF4-236ENST00000567880 GOLIM4O00461 696 aa12.67□□□□□ -0.38
TCF4-236ENST00000567880 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
TCF4-236ENST00000567880 BBOX1O75936 387 aa12.67□□□□□ -0.38
TCF4-236ENST00000567880 CHMLP26374 656 aa12.67□□□□□ -0.38
TCF4-236ENST00000567880 CHRNA5P30532 468 aa12.67□□□□□ -0.38
TCF4-236ENST00000567880 UBE4AQ14139 1066 aa12.67□□□□□ -0.38
TCF4-236ENST00000567880 SCARF1Q14162 830 aa12.67□□□□□ -0.38
TCF4-236ENST00000567880 PI16Q6UXB8 463 aa12.67□□□□□ -0.38
TCF4-236ENST00000567880 ILDR2Q71H61 639 aa12.67□□□□□ -0.38
TCF4-236ENST00000567880 UPF2Q9HAU5 1272 aaKnown RBP12.67□□□□□ -0.38
TCF4-236ENST00000567880 KIF13BQ9NQT8 1826 aa12.66□□□□□ -0.38
TCF4-236ENST00000567880 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
TCF4-236ENST00000567880 BCAMP50895 628 aa12.66□□□□□ -0.38
TCF4-236ENST00000567880 MTFR1LQ9H019 292 aa12.66□□□□□ -0.38
TCF4-236ENST00000567880 PAG1Q9NWQ8 432 aa12.66□□□□□ -0.38
TCF4-236ENST00000567880 NSFL1CQ9UNZ2 370 aaKnown RBP12.66□□□□□ -0.38
TCF4-236ENST00000567880 C10orf71Q711Q0 1435 aa12.66□□□□□ -0.38
TCF4-236ENST00000567880 ZNF804BA4D1E1 1349 aa12.66□□□□□ -0.38
TCF4-236ENST00000567880 XDHP47989 1333 aa12.66□□□□□ -0.38
TCF4-236ENST00000567880 KLRK1P26718 216 aa12.66□□□□□ -0.38
TCF4-236ENST00000567880 POLD1P28340 1107 aa12.66□□□□□ -0.38
TCF4-236ENST00000567880 ALDH1B1P30837 517 aa12.66□□□□□ -0.38
TCF4-236ENST00000567880 MCAMP43121 646 aa12.66□□□□□ -0.38
TCF4-236ENST00000567880 GYG1P46976 350 aa12.66□□□□□ -0.38
TCF4-236ENST00000567880 DIAPH3Q9NSV4 1193 aa12.66□□□□□ -0.38
TCF4-236ENST00000567880 ZAP70P43403 619 aa12.65□□□□□ -0.38
TCF4-236ENST00000567880 GPSM2P81274 684 aa12.65□□□□□ -0.38
TCF4-236ENST00000567880 CAVIN4Q5BKX8 364 aa12.65□□□□□ -0.38
TCF4-236ENST00000567880 CWC27Q6UX04 472 aaKnown RBP12.65□□□□□ -0.38
TCF4-236ENST00000567880 VPS37DQ86XT2 251 aa12.65□□□□□ -0.38
TCF4-236ENST00000567880 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.65□□□□□ -0.38
TCF4-236ENST00000567880 ANTXR1Q9H6X2 564 aa12.65□□□□□ -0.38
TCF4-236ENST00000567880 IQSEC3Q9UPP2 1182 aaPredicted RBP12.65□□□□□ -0.38
TCF4-236ENST00000567880 UQCRFS1P1P0C7P4 283 aa12.64□□□□□ -0.39
TCF4-236ENST00000567880 ARID4AP29374 1257 aaPredicted RBP12.64□□□□□ -0.39
TCF4-236ENST00000567880 OLFM4Q6UX06 510 aa12.64□□□□□ -0.39
TCF4-236ENST00000567880 LTBP1Q14766 1721 aa12.64□□□□□ -0.39
TCF4-236ENST00000567880 GOLGB1Q14789 3259 aaKnown RBP12.64□□□□□ -0.39
TCF4-236ENST00000567880 UFL1O94874 794 aa12.64□□□□□ -0.39
TCF4-236ENST00000567880 RASGRF1Q13972 1273 aa12.64□□□□□ -0.39
TCF4-236ENST00000567880 STYK1Q6J9G0 422 aa12.64□□□□□ -0.39
TCF4-236ENST00000567880 TMC4Q7Z404 712 aa12.64□□□□□ -0.39
TCF4-236ENST00000567880 ZNF512BQ96KM6 892 aaPredicted RBP12.64□□□□□ -0.39
TCF4-236ENST00000567880 GPR101Q96P66 508 aaPredicted RBP12.64□□□□□ -0.39
TCF4-236ENST00000567880 ESYT1Q9BSJ8 1104 aa12.64□□□□□ -0.39
TCF4-236ENST00000567880 SLC24A3Q9HC58 644 aa12.64□□□□□ -0.39
TCF4-236ENST00000567880 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
TCF4-236ENST00000567880 TXNRD3Q86VQ6 643 aa12.63□□□□□ -0.39
TCF4-236ENST00000567880 SP8Q8IXZ3 490 aa12.63□□□□□ -0.39
TCF4-236ENST00000567880 KBTBD3Q8NAB2 608 aa12.63□□□□□ -0.39
TCF4-236ENST00000567880 FAM84BQ96KN1 310 aaPredicted RBP12.63□□□□□ -0.39
TCF4-236ENST00000567880 TMX4Q9H1E5 349 aaPredicted RBP12.63□□□□□ -0.39
TCF4-236ENST00000567880 PPP1R1BQ9UD71 204 aaPredicted RBP12.63□□□□□ -0.39
TCF4-236ENST00000567880 GGA1Q9UJY5 639 aa12.63□□□□□ -0.39
TCF4-236ENST00000567880 LEMD3Q9Y2U8 911 aa12.63□□□□□ -0.39
TCF4-236ENST00000567880 ATP6V0A2Q9Y487 856 aa12.63□□□□□ -0.39
TCF4-236ENST00000567880 DOCK2Q92608 1830 aa12.63□□□□□ -0.39
TCF4-236ENST00000567880 HIP1O00291 1037 aa12.62□□□□□ -0.39
TCF4-236ENST00000567880 FRAT2O75474 233 aaPredicted RBP12.62□□□□□ -0.39
TCF4-236ENST00000567880 PRPF40BQ6NWY9 871 aaKnown RBP12.62□□□□□ -0.39
TCF4-236ENST00000567880 SPATA5Q8NB90 893 aa12.62□□□□□ -0.39
TCF4-236ENST00000567880 IL25Q9H293 177 aa12.62□□□□□ -0.39
TCF4-236ENST00000567880 GNL3LQ9NVN8 582 aaKnown RBP12.62□□□□□ -0.39
TCF4-236ENST00000567880 HMG20BQ9P0W2 317 aa12.62□□□□□ -0.39
TCF4-236ENST00000567880 A0A0G2JLW4 131 aa12.62□□□□□ -0.39
TCF4-236ENST00000567880 C6orf229H3BNL8 230 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms