RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 L3MBTL3Q96JM7 780 aaPredicted RBP21.42■■□□□ 1.02
COMMD4-220ENST00000567720 POTECB2RU33 542 aa21.41■■□□□ 1.02
COMMD4-220ENST00000567720 PDE8BO95263 885 aa21.41■■□□□ 1.02
COMMD4-220ENST00000567720 ATP8B2P98198 1209 aa21.41■■□□□ 1.02
COMMD4-220ENST00000567720 UBE4AQ14139 1066 aa21.41■■□□□ 1.02
COMMD4-220ENST00000567720 KCNQ5Q9NR82 932 aa21.41■■□□□ 1.02
COMMD4-220ENST00000567720 GJA3Q9Y6H8 435 aa21.41■■□□□ 1.02
COMMD4-220ENST00000567720 ZNF609O15014 1411 aa21.4■■□□□ 1.02
COMMD4-220ENST00000567720 KIF3CO14782 793 aa21.4■■□□□ 1.02
COMMD4-220ENST00000567720 IL15P40933 162 aaPredicted RBP21.4■■□□□ 1.02
COMMD4-220ENST00000567720 CIAPIN1Q6FI81 312 aa21.4■■□□□ 1.02
COMMD4-220ENST00000567720 FGFR2P21802 821 aa21.39■■□□□ 1.01
COMMD4-220ENST00000567720 RRAGCQ9HB90 399 aa21.39■■□□□ 1.01
COMMD4-220ENST00000567720 PSMD14O00487 310 aa21.38■■□□□ 1.01
COMMD4-220ENST00000567720 SCNN1DP51172 638 aa21.38■■□□□ 1.01
COMMD4-220ENST00000567720 PUM3Q15397 648 aaKnown RBP21.38■■□□□ 1.01
COMMD4-220ENST00000567720 COA1Q9GZY4 146 aa21.38■■□□□ 1.01
COMMD4-220ENST00000567720 G3V3G9 751 aa21.37■■□□□ 1.01
COMMD4-220ENST00000567720 DCAF8Q5TAQ9 597 aa21.37■■□□□ 1.01
COMMD4-220ENST00000567720 CRBNQ96SW2 442 aa21.37■■□□□ 1.01
COMMD4-220ENST00000567720 CHMP4BQ9H444 224 aaKnown RBP21.37■■□□□ 1.01
COMMD4-220ENST00000567720 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.37■■□□□ 1.01
COMMD4-220ENST00000567720 ZNF804AQ7Z570 1209 aa21.36■■□□□ 1.01
COMMD4-220ENST00000567720 PODNQ7Z5L7 613 aa21.36■■□□□ 1.01
COMMD4-220ENST00000567720 SIRT2Q8IXJ6 389 aa21.36■■□□□ 1.01
COMMD4-220ENST00000567720 COL1A1P02452 1464 aaPredicted RBP21.35■■□□□ 1.01
COMMD4-220ENST00000567720 ECM29Q5VYK3 1845 aa21.35■■□□□ 1.01
COMMD4-220ENST00000567720 GYG1P46976 350 aa21.35■■□□□ 1.01
COMMD4-220ENST00000567720 GMPSP49915 693 aaPredicted RBP21.35■■□□□ 1.01
COMMD4-220ENST00000567720 TNIP1Q15025 636 aa21.35■■□□□ 1.01
COMMD4-220ENST00000567720 CD209Q9NNX6 404 aa21.35■■□□□ 1.01
COMMD4-220ENST00000567720 CEP126Q9P2H0 1117 aa21.35■■□□□ 1.01
COMMD4-220ENST00000567720 VEGFAP15692 232 aaPredicted RBP21.34■■□□□ 1.01
COMMD4-220ENST00000567720 TFCP2Q12800 502 aa21.34■■□□□ 1.01
COMMD4-220ENST00000567720 ATP2B3Q16720 1220 aa21.34■■□□□ 1.01
COMMD4-220ENST00000567720 FAM84BQ96KN1 310 aaPredicted RBP21.34■■□□□ 1.01
COMMD4-220ENST00000567720 ZBTB12Q9Y330 459 aaPredicted RBP21.34■■□□□ 1.01
COMMD4-220ENST00000567720 SUPT16HQ9Y5B9 1047 aaKnown RBP21.34■■□□□ 1.01
COMMD4-220ENST00000567720 IQCA1LA6NCM1 817 aa21.33■■□□□ 1.01
COMMD4-220ENST00000567720 SASH1O94885 1247 aa21.33■■□□□ 1.01
COMMD4-220ENST00000567720 SLC5A1P13866 664 aa21.33■■□□□ 1.01
COMMD4-220ENST00000567720 IL1R1P14778 569 aa21.33■■□□□ 1.01
COMMD4-220ENST00000567720 RPAP2Q8IXW5 612 aaPredicted RBP21.33■■□□□ 1.01
COMMD4-220ENST00000567720 LPIN2Q92539 896 aa21.33■■□□□ 1.01
COMMD4-220ENST00000567720 HACL1Q9UJ83 578 aa21.33■■□□□ 1.01
COMMD4-220ENST00000567720 NOP58Q9Y2X3 529 aaKnown RBP21.33■■□□□ 1.01
COMMD4-220ENST00000567720 SHTN1A0MZ66 631 aa21.32■■□□□ 1
COMMD4-220ENST00000567720 USP17L3A6NCW0 530 aa21.32■■□□□ 1
COMMD4-220ENST00000567720 USP17L4A6NCW7 530 aa21.32■■□□□ 1
COMMD4-220ENST00000567720 SURF6O75683 361 aaKnown RBP21.32■■□□□ 1
COMMD4-220ENST00000567720 VIL1P09327 827 aaKnown RBP21.32■■□□□ 1
COMMD4-220ENST00000567720 IFIT1P09914 478 aaKnown RBP21.32■■□□□ 1
COMMD4-220ENST00000567720 DACT2Q5SW24 774 aa21.32■■□□□ 1
COMMD4-220ENST00000567720 USP17L1Q7RTZ2 530 aa21.32■■□□□ 1
COMMD4-220ENST00000567720 TAF1DQ9H5J8 278 aaPredicted RBP21.32■■□□□ 1
COMMD4-220ENST00000567720 GPRC5DQ9NZD1 345 aa21.32■■□□□ 1
COMMD4-220ENST00000567720 AKAP11Q9UKA4 1901 aa21.31■■□□□ 1
COMMD4-220ENST00000567720 HIBADHP31937 336 aaKnown RBP21.31■■□□□ 1
COMMD4-220ENST00000567720 EPS15P42566 896 aa21.31■■□□□ 1
COMMD4-220ENST00000567720 G3BP1Q13283 466 aaKnown RBP eCLIP21.31■■□□□ 12e-6■□□□□ 9.5
COMMD4-220ENST00000567720 RSBN1LQ6PCB5 846 aaPredicted RBP21.31■■□□□ 1
COMMD4-220ENST00000567720 FBXO33Q7Z6M2 555 aa21.31■■□□□ 1
COMMD4-220ENST00000567720 MXD3Q9BW11 206 aa21.31■■□□□ 1
COMMD4-220ENST00000567720 EXOC6BQ9Y2D4 811 aa21.31■■□□□ 1
COMMD4-220ENST00000567720 POTEIP0CG38 1075 aa21.3■■□□□ 1
COMMD4-220ENST00000567720 POTEJP0CG39 1038 aa21.3■■□□□ 1
COMMD4-220ENST00000567720 LMOD1P29536 600 aaPredicted RBP21.3■■□□□ 1
COMMD4-220ENST00000567720 ADORA1P30542 326 aa21.3■■□□□ 1
COMMD4-220ENST00000567720 EPHX2P34913 555 aa21.3■■□□□ 1
COMMD4-220ENST00000567720 STRIP1Q5VSL9 837 aa21.3■■□□□ 1
COMMD4-220ENST00000567720 FBXW7Q969H0 707 aa21.3■■□□□ 1
COMMD4-220ENST00000567720 A0A1B0GUL7 405 aa21.29■■□□□ 1
COMMD4-220ENST00000567720 HMMRO75330 724 aa21.29■■□□□ 1
COMMD4-220ENST00000567720 RPS12P25398 132 aaKnown RBP21.29■■□□□ 1
COMMD4-220ENST00000567720 BCAMP50895 628 aa21.29■■□□□ 1
COMMD4-220ENST00000567720 GTF2IP78347 998 aa21.29■■□□□ 1
COMMD4-220ENST00000567720 OS9Q13438 667 aaPredicted RBP21.29■■□□□ 1
COMMD4-220ENST00000567720 MICALL2Q8IY33 904 aa21.29■■□□□ 1
COMMD4-220ENST00000567720 TDRD7Q8NHU6 1098 aaKnown RBP21.29■■□□□ 1
COMMD4-220ENST00000567720 GMLQ99445 158 aa21.29■■□□□ 1
COMMD4-220ENST00000567720 IQSEC3Q9UPP2 1182 aaPredicted RBP21.29■■□□□ 1
COMMD4-220ENST00000567720 JAG2Q9Y219 1238 aa21.29■■□□□ 1
COMMD4-220ENST00000567720 CAVIN4Q5BKX8 364 aa21.28■■□□□ 1
COMMD4-220ENST00000567720 DPF2Q92785 391 aa21.28■■□□□ 1
COMMD4-220ENST00000567720 MYO5AQ9Y4I1 1855 aaKnown RBP21.28■■□□□ 1
COMMD4-220ENST00000567720 MAST2Q6P0Q8 1798 aa21.28■■□□□ 1
COMMD4-220ENST00000567720 POLR2AP24928 1970 aaKnown RBP21.27■■□□□ 1
COMMD4-220ENST00000567720 TTLL5Q6EMB2 1281 aa21.27■■□□□ 1
COMMD4-220ENST00000567720 VPS37DQ86XT2 251 aa21.27■■□□□ 1
COMMD4-220ENST00000567720 C16orf71Q8IYS4 520 aaPredicted RBP21.27■■□□□ 1
COMMD4-220ENST00000567720 CERS5Q8N5B7 392 aa21.27■■□□□ 1
COMMD4-220ENST00000567720 AGBL3Q8NEM8 1001 aa21.27■■□□□ 1
COMMD4-220ENST00000567720 PCDHB15Q9Y5E8 787 aa21.27■■□□□ 1
COMMD4-220ENST00000567720 FAM205AQ6ZU69 1335 aa21.27■□□□□ 0.99
COMMD4-220ENST00000567720 MYO3BQ8WXR4 1341 aa21.27■□□□□ 0.99
COMMD4-220ENST00000567720 TOMM70O94826 608 aa21.26■□□□□ 0.99
COMMD4-220ENST00000567720 PHKA1P46020 1223 aa21.26■□□□□ 0.99
COMMD4-220ENST00000567720 TIMM10P62072 90 aa21.26■□□□□ 0.99
COMMD4-220ENST00000567720 TRPM4Q8TD43 1214 aa21.26■□□□□ 0.99
COMMD4-220ENST00000567720 ADARB2Q9NS39 739 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 480.6 ms