RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 TXNRD3Q86VQ6 643 aa29.48■■■□□ 2.31
CNEP1R1-209ENST00000567712 TRPA1O75762 1119 aa29.47■■■□□ 2.31
CNEP1R1-209ENST00000567712 PRAMEF18Q5VWM3 479 aa29.47■■■□□ 2.31
CNEP1R1-209ENST00000567712 RASAL3Q86YV0 1011 aa29.47■■■□□ 2.31
CNEP1R1-209ENST00000567712 MED23Q9ULK4 1368 aa29.47■■■□□ 2.31
CNEP1R1-209ENST00000567712 PAPPA2Q9BXP8 1791 aa29.47■■■□□ 2.31
CNEP1R1-209ENST00000567712 H7C1W4 665 aa29.46■■■□□ 2.31
CNEP1R1-209ENST00000567712 MLLT1Q03111 559 aaPredicted RBP29.46■■■□□ 2.31
CNEP1R1-209ENST00000567712 NBPF9Q3BBW0 867 aa29.46■■■□□ 2.31
CNEP1R1-209ENST00000567712 SAGE1Q9NXZ1 904 aa29.46■■■□□ 2.31
CNEP1R1-209ENST00000567712 CCT4P50991 539 aaKnown RBP29.45■■■□□ 2.31
CNEP1R1-209ENST00000567712 DACT2Q5SW24 774 aa29.45■■■□□ 2.31
CNEP1R1-209ENST00000567712 UBE3BQ7Z3V4 1068 aa29.45■■■□□ 2.31
CNEP1R1-209ENST00000567712 WWC1Q8IX03 1113 aa29.45■■■□□ 2.31
CNEP1R1-209ENST00000567712 KLRK1P26718 216 aa29.44■■■□□ 2.3
CNEP1R1-209ENST00000567712 TWISTNBQ3B726 338 aaPredicted RBP29.44■■■□□ 2.3
CNEP1R1-209ENST00000567712 PITPNM2Q9BZ72 1349 aa29.44■■■□□ 2.3
CNEP1R1-209ENST00000567712 SLC4A2P04920 1241 aa29.43■■■□□ 2.3
CNEP1R1-209ENST00000567712 STK31Q9BXU1 1019 aa29.43■■■□□ 2.3
CNEP1R1-209ENST00000567712 CASP7P55210 303 aa29.42■■■□□ 2.3
CNEP1R1-209ENST00000567712 NEXNQ0ZGT2 675 aa29.42■■■□□ 2.3
CNEP1R1-209ENST00000567712 TNRC18O15417 2968 aaPredicted RBP29.42■■■□□ 2.3
CNEP1R1-209ENST00000567712 CCDC27Q2M243 656 aa29.41■■■□□ 2.3
CNEP1R1-209ENST00000567712 CHMP4AQ9BY43 222 aa29.41■■■□□ 2.3
CNEP1R1-209ENST00000567712 CACNA1FO60840 1977 aa29.41■■■□□ 2.3
CNEP1R1-209ENST00000567712 UBE2Q2LH0YL09 131 aa29.4■■■□□ 2.3
CNEP1R1-209ENST00000567712 GCKRQ14397 625 aa29.4■■■□□ 2.3
CNEP1R1-209ENST00000567712 FBXW7Q969H0 707 aa29.4■■■□□ 2.3
CNEP1R1-209ENST00000567712 WNT10BO00744 389 aa29.39■■■□□ 2.3
CNEP1R1-209ENST00000567712 PLA2G12BQ9BX93 195 aa29.39■■■□□ 2.3
CNEP1R1-209ENST00000567712 ITGA6P23229 1130 aa29.38■■■□□ 2.29
CNEP1R1-209ENST00000567712 FKBP1BP68106 108 aa29.38■■■□□ 2.29
CNEP1R1-209ENST00000567712 STRIP1Q5VSL9 837 aa29.38■■■□□ 2.29
CNEP1R1-209ENST00000567712 COA1Q9GZY4 146 aa29.38■■■□□ 2.29
CNEP1R1-209ENST00000567712 A0A1B0GUL6 1792 aa29.37■■■□□ 2.29
CNEP1R1-209ENST00000567712 FLIIQ13045 1269 aa29.37■■■□□ 2.29
CNEP1R1-209ENST00000567712 LEMD3Q9Y2U8 911 aa29.37■■■□□ 2.29
CNEP1R1-209ENST00000567712 SNAP23O00161 211 aa29.36■■■□□ 2.29
CNEP1R1-209ENST00000567712 SASH1O94885 1247 aa29.36■■■□□ 2.29
CNEP1R1-209ENST00000567712 CSF1RP07333 972 aa29.36■■■□□ 2.29
CNEP1R1-209ENST00000567712 IGHMBP2P38935 993 aaKnown RBP29.36■■■□□ 2.29
CNEP1R1-209ENST00000567712 ZNF804BA4D1E1 1349 aa29.36■■■□□ 2.29
CNEP1R1-209ENST00000567712 TTLL5Q6EMB2 1281 aa29.33■■■□□ 2.29
CNEP1R1-209ENST00000567712 DNAAF4Q8WXU2 420 aa29.33■■■□□ 2.29
CNEP1R1-209ENST00000567712 FANCIQ9NVI1 1328 aa29.33■■■□□ 2.29
CNEP1R1-209ENST00000567712 IRS2Q9Y4H2 1338 aa29.33■■■□□ 2.29
CNEP1R1-209ENST00000567712 IL16Q14005 1332 aa29.32■■■□□ 2.28
CNEP1R1-209ENST00000567712 CHRNDQ07001 517 aa29.32■■■□□ 2.28
CNEP1R1-209ENST00000567712 KIAA0825Q8IV33 1275 aa29.32■■■□□ 2.28
CNEP1R1-209ENST00000567712 OGFOD1Q8N543 542 aa29.32■■■□□ 2.28
CNEP1R1-209ENST00000567712 ZBED3Q96IU2 234 aaPredicted RBP29.32■■■□□ 2.28
CNEP1R1-209ENST00000567712 MYO3BQ8WXR4 1341 aa29.31■■■□□ 2.28
CNEP1R1-209ENST00000567712 VAMP4O75379 141 aa29.31■■■□□ 2.28
CNEP1R1-209ENST00000567712 GTF2IP78347 998 aa29.31■■■□□ 2.28
CNEP1R1-209ENST00000567712 FKBP5Q13451 457 aaPredicted RBP29.31■■■□□ 2.28
CNEP1R1-209ENST00000567712 PDE4DIPQ5VU43 2346 aa29.31■■■□□ 2.28
CNEP1R1-209ENST00000567712 SOX10P56693 466 aa29.3■■■□□ 2.28
CNEP1R1-209ENST00000567712 MKRN3Q13064 507 aaKnown RBP29.3■■■□□ 2.28
CNEP1R1-209ENST00000567712 MPHOSPH8Q99549 860 aa29.3■■■□□ 2.28
CNEP1R1-209ENST00000567712 ANKRD2Q9GZV1 360 aa29.3■■■□□ 2.28
CNEP1R1-209ENST00000567712 TAF5LO75529 589 aa29.29■■■□□ 2.28
CNEP1R1-209ENST00000567712 SLC34A2O95436 690 aa29.29■■■□□ 2.28
CNEP1R1-209ENST00000567712 TBC1D8O95759 1140 aa29.29■■■□□ 2.28
CNEP1R1-209ENST00000567712 TTLL12Q14166 644 aaPredicted RBP29.29■■■□□ 2.28
CNEP1R1-209ENST00000567712 REM2Q8IYK8 340 aaPredicted RBP29.29■■■□□ 2.28
CNEP1R1-209ENST00000567712 HELBQ8NG08 1087 aaPredicted RBP29.29■■■□□ 2.28
CNEP1R1-209ENST00000567712 LINS1Q8NG48 757 aa29.29■■■□□ 2.28
CNEP1R1-209ENST00000567712 FZD1Q9UP38 647 aa29.29■■■□□ 2.28
CNEP1R1-209ENST00000567712 SALL2Q9Y467 1007 aaPredicted RBP29.29■■■□□ 2.28
CNEP1R1-209ENST00000567712 PCDHAC2Q9Y5I4 1007 aa29.29■■■□□ 2.28
CNEP1R1-209ENST00000567712 F6X3S4 739 aa29.28■■■□□ 2.28
CNEP1R1-209ENST00000567712 FOXO4P98177 505 aa29.28■■■□□ 2.28
CNEP1R1-209ENST00000567712 PTPN12Q05209 780 aaKnown RBP29.28■■■□□ 2.28
CNEP1R1-209ENST00000567712 PRKG1Q13976 671 aa29.28■■■□□ 2.28
CNEP1R1-209ENST00000567712 CTU1Q7Z7A3 348 aaKnown RBP29.28■■■□□ 2.28
CNEP1R1-209ENST00000567712 CERS5Q8N5B7 392 aa29.28■■■□□ 2.28
CNEP1R1-209ENST00000567712 CD209Q9NNX6 404 aa29.28■■■□□ 2.28
CNEP1R1-209ENST00000567712 MYH16Q9H6N6 1097 aa29.27■■■□□ 2.28
CNEP1R1-209ENST00000567712 ECM29Q5VYK3 1845 aa29.27■■■□□ 2.28
CNEP1R1-209ENST00000567712 EXOSC9Q06265 439 aaKnown RBP29.26■■■□□ 2.27
CNEP1R1-209ENST00000567712 TM4SF4P48230 202 aa29.25■■■□□ 2.27
CNEP1R1-209ENST00000567712 EPHA10Q5JZY3 1008 aa29.25■■■□□ 2.27
CNEP1R1-209ENST00000567712 ZNF296Q8WUU4 475 aaPredicted RBP29.25■■■□□ 2.27
CNEP1R1-209ENST00000567712 SPINK5Q9NQ38 1064 aaPredicted RBP29.25■■■□□ 2.27
CNEP1R1-209ENST00000567712 ANKRD18BA2A2Z9 1011 aa29.24■■■□□ 2.27
CNEP1R1-209ENST00000567712 R3HDMLQ9H3Y0 253 aa29.24■■■□□ 2.27
CNEP1R1-209ENST00000567712 AOX1Q06278 1338 aa29.23■■■□□ 2.27
CNEP1R1-209ENST00000567712 KCNJ4P48050 445 aa29.23■■■□□ 2.27
CNEP1R1-209ENST00000567712 NCBP3Q53F19 620 aaKnown RBP29.23■■■□□ 2.27
CNEP1R1-209ENST00000567712 BEND3Q5T5X7 828 aa29.23■■■□□ 2.27
CNEP1R1-209ENST00000567712 APOBEC3FQ8IUX4 373 aaKnown RBP29.22■■■□□ 2.27
CNEP1R1-209ENST00000567712 HDAC9Q9UKV0 1011 aa29.22■■■□□ 2.27
CNEP1R1-209ENST00000567712 NF2P35240 595 aa29.21■■■□□ 2.27
CNEP1R1-209ENST00000567712 LDLRAD1Q5T700 205 aa29.21■■■□□ 2.27
CNEP1R1-209ENST00000567712 C15orf52Q6ZUT6 534 aaKnown RBP29.21■■■□□ 2.27
CNEP1R1-209ENST00000567712 ZNF594Q96JF6 807 aaPredicted RBP29.21■■■□□ 2.27
CNEP1R1-209ENST00000567712 MRS2Q9HD23 443 aa29.21■■■□□ 2.27
CNEP1R1-209ENST00000567712 SSC5DA1L4H1 1573 aa29.21■■■□□ 2.27
CNEP1R1-209ENST00000567712 MMP14P50281 582 aa29.2■■■□□ 2.26
CNEP1R1-209ENST00000567712 ANGEL1Q9UNK9 670 aaKnown RBP29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms