RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 GPC2Q8N158 579 aa15.49■□□□□ 0.07
RNF40-211ENST00000567365 C1orf115Q9H7X2 142 aa15.49■□□□□ 0.07
RNF40-211ENST00000567365 DBNDD1Q9H9R9 158 aa15.49■□□□□ 0.07
RNF40-211ENST00000567365 ZNF609O15014 1411 aa15.49■□□□□ 0.07
RNF40-211ENST00000567365 ECE2O60344 883 aa15.48■□□□□ 0.07
RNF40-211ENST00000567365 PDE8BO95263 885 aa15.48■□□□□ 0.07
RNF40-211ENST00000567365 FGFR2P21802 821 aa15.48■□□□□ 0.07
RNF40-211ENST00000567365 EIF6P56537 245 aaKnown RBP15.48■□□□□ 0.07
RNF40-211ENST00000567365 CEP85Q6P2H3 762 aa15.48■□□□□ 0.07
RNF40-211ENST00000567365 KCNQ5Q9NR82 932 aa15.48■□□□□ 0.07
RNF40-211ENST00000567365 SCNN1DP51172 638 aa15.47■□□□□ 0.07
RNF40-211ENST00000567365 PODNQ7Z5L7 613 aa15.47■□□□□ 0.07
RNF40-211ENST00000567365 RBM46Q8TBY0 533 aaKnown RBP15.47■□□□□ 0.07
RNF40-211ENST00000567365 RRAGCQ9HB90 399 aa15.47■□□□□ 0.07
RNF40-211ENST00000567365 RAD17O75943 681 aa15.46■□□□□ 0.07
RNF40-211ENST00000567365 IL15P40933 162 aaPredicted RBP15.46■□□□□ 0.07
RNF40-211ENST00000567365 METTL24Q5JXM2 366 aa15.46■□□□□ 0.07
RNF40-211ENST00000567365 CIAPIN1Q6FI81 312 aa15.46■□□□□ 0.07
RNF40-211ENST00000567365 SIL1Q9H173 461 aa15.46■□□□□ 0.07
RNF40-211ENST00000567365 ADAMTSL1Q8N6G6 1762 aa15.46■□□□□ 0.07
RNF40-211ENST00000567365 VEGFAP15692 232 aaPredicted RBP15.45■□□□□ 0.06
RNF40-211ENST00000567365 SIRT2Q8IXJ6 389 aa15.45■□□□□ 0.06
RNF40-211ENST00000567365 FAM84BQ96KN1 310 aaPredicted RBP15.45■□□□□ 0.06
RNF40-211ENST00000567365 COA1Q9GZY4 146 aa15.45■□□□□ 0.06
RNF40-211ENST00000567365 CD209Q9NNX6 404 aa15.45■□□□□ 0.06
RNF40-211ENST00000567365 NOP58Q9Y2X3 529 aaKnown RBP15.45■□□□□ 0.06
RNF40-211ENST00000567365 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.45■□□□□ 0.06
RNF40-211ENST00000567365 ARAP2Q8WZ64 1704 aa15.45■□□□□ 0.06
RNF40-211ENST00000567365 PSMD14O00487 310 aa15.44■□□□□ 0.06
RNF40-211ENST00000567365 VIL1P09327 827 aaKnown RBP15.44■□□□□ 0.06
RNF40-211ENST00000567365 IL1R1P14778 569 aa15.44■□□□□ 0.06
RNF40-211ENST00000567365 KCNJ4P48050 445 aa15.44■□□□□ 0.06
RNF40-211ENST00000567365 FBXO33Q7Z6M2 555 aa15.44■□□□□ 0.06
RNF40-211ENST00000567365 GMLQ99445 158 aa15.44■□□□□ 0.06
RNF40-211ENST00000567365 SASH1O94885 1247 aa15.43■□□□□ 0.06
RNF40-211ENST00000567365 TNIP1Q15025 636 aa15.43■□□□□ 0.06
RNF40-211ENST00000567365 PUM3Q15397 648 aaKnown RBP15.43■□□□□ 0.06
RNF40-211ENST00000567365 RPAP2Q8IXW5 612 aaPredicted RBP15.43■□□□□ 0.06
RNF40-211ENST00000567365 DPF2Q92785 391 aa15.43■□□□□ 0.06
RNF40-211ENST00000567365 CHMP4BQ9H444 224 aaKnown RBP15.43■□□□□ 0.06
RNF40-211ENST00000567365 TAF1DQ9H5J8 278 aaPredicted RBP15.43■□□□□ 0.06
RNF40-211ENST00000567365 GJA3Q9Y6H8 435 aa15.43■□□□□ 0.06
RNF40-211ENST00000567365 ZBTB22O15209 634 aa15.42■□□□□ 0.06
RNF40-211ENST00000567365 GMPSP49915 693 aaPredicted RBP15.42■□□□□ 0.06
RNF40-211ENST00000567365 DACT2Q5SW24 774 aa15.42■□□□□ 0.06
RNF40-211ENST00000567365 C16orf71Q8IYS4 520 aaPredicted RBP15.42■□□□□ 0.06
RNF40-211ENST00000567365 TDRD7Q8NHU6 1098 aaKnown RBP15.42■□□□□ 0.06
RNF40-211ENST00000567365 LPIN2Q92539 896 aa15.42■□□□□ 0.06
RNF40-211ENST00000567365 KLRG1Q96E93 195 aa15.42■□□□□ 0.06
RNF40-211ENST00000567365 GPRC5DQ9NZD1 345 aa15.42■□□□□ 0.06
RNF40-211ENST00000567365 CEP126Q9P2H0 1117 aa15.42■□□□□ 0.06
RNF40-211ENST00000567365 IQCA1LA6NCM1 817 aa15.41■□□□□ 0.06
RNF40-211ENST00000567365 USP17L3A6NCW0 530 aa15.41■□□□□ 0.06
RNF40-211ENST00000567365 USP17L4A6NCW7 530 aa15.41■□□□□ 0.06
RNF40-211ENST00000567365 RPS12P25398 132 aaKnown RBP15.41■□□□□ 0.06
RNF40-211ENST00000567365 GYG1P46976 350 aa15.41■□□□□ 0.06
RNF40-211ENST00000567365 FSTL1Q12841 308 aa15.41■□□□□ 0.06
RNF40-211ENST00000567365 COL13A1Q5TAT6 717 aaPredicted RBP15.41■□□□□ 0.06
RNF40-211ENST00000567365 STRIP1Q5VSL9 837 aa15.41■□□□□ 0.06
RNF40-211ENST00000567365 RSBN1LQ6PCB5 846 aaPredicted RBP15.41■□□□□ 0.06
RNF40-211ENST00000567365 USP17L1Q7RTZ2 530 aa15.41■□□□□ 0.06
RNF40-211ENST00000567365 JMYQ8N9B5 988 aa15.41■□□□□ 0.06
RNF40-211ENST00000567365 HACL1Q9UJ83 578 aa15.41■□□□□ 0.06
RNF40-211ENST00000567365 ZBTB12Q9Y330 459 aaPredicted RBP15.41■□□□□ 0.06
RNF40-211ENST00000567365 HIBADHP31937 336 aaKnown RBP15.4■□□□□ 0.06
RNF40-211ENST00000567365 EPS15P42566 896 aa15.4■□□□□ 0.06
RNF40-211ENST00000567365 ZNF804AQ7Z570 1209 aa15.4■□□□□ 0.06
RNF40-211ENST00000567365 FAM205AQ6ZU69 1335 aa15.4■□□□□ 0.06
RNF40-211ENST00000567365 SHTN1A0MZ66 631 aa15.39■□□□□ 0.05
RNF40-211ENST00000567365 POTEIP0CG38 1075 aa15.39■□□□□ 0.05
RNF40-211ENST00000567365 POTEJP0CG39 1038 aa15.39■□□□□ 0.05
RNF40-211ENST00000567365 EPHX2P34913 555 aa15.39■□□□□ 0.05
RNF40-211ENST00000567365 TFCP2Q12800 502 aa15.39■□□□□ 0.05
RNF40-211ENST00000567365 ATP2B3Q16720 1220 aa15.39■□□□□ 0.05
RNF40-211ENST00000567365 AGBL3Q8NEM8 1001 aa15.39■□□□□ 0.05
RNF40-211ENST00000567365 CRBNQ96SW2 442 aa15.39■□□□□ 0.05
RNF40-211ENST00000567365 G3V3G9 751 aa15.38■□□□□ 0.05
RNF40-211ENST00000567365 SURF6O75683 361 aaKnown RBP15.38■□□□□ 0.05
RNF40-211ENST00000567365 IFIT1P09914 478 aaKnown RBP15.38■□□□□ 0.05
RNF40-211ENST00000567365 SLC5A1P13866 664 aa15.38■□□□□ 0.05
RNF40-211ENST00000567365 BCAMP50895 628 aa15.38■□□□□ 0.05
RNF40-211ENST00000567365 ZNF280AP59817 542 aaPredicted RBP15.38■□□□□ 0.05
RNF40-211ENST00000567365 G3BP1Q13283 466 aaKnown RBP eCLIP15.38■□□□□ 0.053e-8■■■□□ 15.2
RNF40-211ENST00000567365 DCAF8Q5TAQ9 597 aa15.38■□□□□ 0.05
RNF40-211ENST00000567365 TTLL5Q6EMB2 1281 aa15.38■□□□□ 0.05
RNF40-211ENST00000567365 CERS5Q8N5B7 392 aa15.38■□□□□ 0.05
RNF40-211ENST00000567365 MXD3Q9BW11 206 aa15.38■□□□□ 0.05
RNF40-211ENST00000567365 GPR108Q9NPR9 543 aa15.38■□□□□ 0.05
RNF40-211ENST00000567365 A0A1B0GUL7 405 aa15.37■□□□□ 0.05
RNF40-211ENST00000567365 ADORA1P30542 326 aa15.37■□□□□ 0.05
RNF40-211ENST00000567365 TIMM10P62072 90 aa15.37■□□□□ 0.05
RNF40-211ENST00000567365 FKBP1AP62942 108 aaKnown RBP15.37■□□□□ 0.05
RNF40-211ENST00000567365 GTF2IP78347 998 aa15.37■□□□□ 0.05
RNF40-211ENST00000567365 ADARB2Q9NS39 739 aaKnown RBP15.37■□□□□ 0.05
RNF40-211ENST00000567365 CNOT7Q9UIV1 285 aaKnown RBP15.37■□□□□ 0.05
RNF40-211ENST00000567365 PCDHB15Q9Y5E8 787 aa15.37■□□□□ 0.05
RNF40-211ENST00000567365 COL1A1P02452 1464 aaPredicted RBP15.37■□□□□ 0.05
RNF40-211ENST00000567365 LMOD1P29536 600 aaPredicted RBP15.36■□□□□ 0.05
RNF40-211ENST00000567365 HIRAP54198 1017 aaPredicted RBP15.36■□□□□ 0.05
RNF40-211ENST00000567365 USP50Q70EL3 339 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms