RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 GYS2P54840 703 aa13.44□□□□□ -0.26
SIN3A-208ENST00000567289 KSR2Q6VAB6 950 aa13.44□□□□□ -0.26
SIN3A-208ENST00000567289 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.44□□□□□ -0.26
SIN3A-208ENST00000567289 ABCC2Q92887 1545 aa13.44□□□□□ -0.26
SIN3A-208ENST00000567289 ERVK-7P63135 1459 aa13.44□□□□□ -0.26
SIN3A-208ENST00000567289 SSRP1Q08945 709 aaKnown RBP13.44□□□□□ -0.26
SIN3A-208ENST00000567289 MTX1Q13505 466 aa13.44□□□□□ -0.26
SIN3A-208ENST00000567289 NCOA7Q8NI08 942 aa13.44□□□□□ -0.26
SIN3A-208ENST00000567289 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.44□□□□□ -0.26
SIN3A-208ENST00000567289 HLTFQ14527 1009 aaKnown RBP eCLIP13.43□□□□□ -0.26
SIN3A-208ENST00000567289 ZSCAN26Q16670 478 aa13.43□□□□□ -0.26
SIN3A-208ENST00000567289 FBXO38Q6PIJ6 1188 aa13.43□□□□□ -0.26
SIN3A-208ENST00000567289 STAMQ92783 540 aa13.43□□□□□ -0.26
SIN3A-208ENST00000567289 KCNQ3O43525 872 aa13.43□□□□□ -0.26
SIN3A-208ENST00000567289 ZNF202O95125 648 aa13.43□□□□□ -0.26
SIN3A-208ENST00000567289 MYL5Q02045 173 aa13.43□□□□□ -0.26
SIN3A-208ENST00000567289 SMC1AQ14683 1233 aaKnown RBP13.43□□□□□ -0.26
SIN3A-208ENST00000567289 SPA17Q15506 151 aa13.43□□□□□ -0.26
SIN3A-208ENST00000567289 MAP9Q49MG5 647 aa13.43□□□□□ -0.26
SIN3A-208ENST00000567289 TDRD12Q587J7 1177 aaKnown RBP13.43□□□□□ -0.26
SIN3A-208ENST00000567289 GIMAP7Q8NHV1 300 aa13.43□□□□□ -0.26
SIN3A-208ENST00000567289 CCDC113Q9H0I3 377 aa13.43□□□□□ -0.26
SIN3A-208ENST00000567289 ST7Q9NRC1 585 aa13.43□□□□□ -0.26
SIN3A-208ENST00000567289 SYNMO15061 1565 aa13.43□□□□□ -0.26
SIN3A-208ENST00000567289 PLCH2O75038 1416 aa13.43□□□□□ -0.26
SIN3A-208ENST00000567289 IRX3P78415 501 aaPredicted RBP13.43□□□□□ -0.26
SIN3A-208ENST00000567289 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.42□□□□□ -0.268e-8■■■□□ 18.8
SIN3A-208ENST00000567289 TTC37Q6PGP7 1564 aa13.42□□□□□ -0.26
SIN3A-208ENST00000567289 YEATS4O95619 227 aa13.42□□□□□ -0.26
SIN3A-208ENST00000567289 SF3A3Q12874 501 aaKnown RBP eCLIP13.42□□□□□ -0.26
SIN3A-208ENST00000567289 EAF2Q96CJ1 260 aaPredicted RBP13.42□□□□□ -0.26
SIN3A-208ENST00000567289 MYL10Q9BUA6 226 aa13.42□□□□□ -0.26
SIN3A-208ENST00000567289 GOLGA6L9A6NEM1 432 aa13.42□□□□□ -0.26
SIN3A-208ENST00000567289 MYO1BO43795 1136 aa13.42□□□□□ -0.26
SIN3A-208ENST00000567289 USP8P40818 1118 aa13.42□□□□□ -0.26
SIN3A-208ENST00000567289 ZNF827Q17R98 1081 aa13.42□□□□□ -0.26
SIN3A-208ENST00000567289 ZFYVE27Q5T4F4 411 aa13.42□□□□□ -0.26
SIN3A-208ENST00000567289 ZKSCAN3Q9BRR0 538 aa13.42□□□□□ -0.26
SIN3A-208ENST00000567289 CDC42BPBQ9Y5S2 1711 aa13.42□□□□□ -0.26
SIN3A-208ENST00000567289 UTP14CQ5TAP6 766 aaKnown RBP13.42□□□□□ -0.26
SIN3A-208ENST00000567289 KIF6Q6ZMV9 814 aa13.42□□□□□ -0.26
SIN3A-208ENST00000567289 TICAM2Q86XR7 235 aa13.42□□□□□ -0.26
SIN3A-208ENST00000567289 ATP10AO60312 1499 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 CTAGE9A4FU28 777 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 USP27XA6NNY8 438 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 LINS1Q8NG48 757 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 LSG1Q9H089 658 aaKnown RBP13.41□□□□□ -0.26
SIN3A-208ENST00000567289 EPC1Q9H2F5 836 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 PLEKHA4Q9H4M7 779 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 ZCCHC17Q9NP64 241 aaKnown RBP13.41□□□□□ -0.26
SIN3A-208ENST00000567289 PAG1Q9NWQ8 432 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 ZBTB43O43298 467 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 ATP2B2Q01814 1243 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 RRAGBQ5VZM2 374 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 LDHAL6AQ6ZMR3 332 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 TOM1L2Q6ZVM7 507 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 PHKBQ93100 1093 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 KRT18P05783 430 aaKnown RBP13.41□□□□□ -0.26
SIN3A-208ENST00000567289 ERCC3P19447 782 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 PLIN2Q99541 437 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 ZNF518AQ6AHZ1 1483 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 PREX2Q70Z35 1606 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 MYO5CQ9NQX4 1742 aa13.41□□□□□ -0.26
SIN3A-208ENST00000567289 RGS12O14924 1447 aa13.4□□□□□ -0.26
SIN3A-208ENST00000567289 TRIM21P19474 475 aaKnown RBP13.4□□□□□ -0.26
SIN3A-208ENST00000567289 CT47A1Q5JQC4 288 aaPredicted RBP13.4□□□□□ -0.26
SIN3A-208ENST00000567289 CD109Q6YHK3 1445 aa13.4□□□□□ -0.26
SIN3A-208ENST00000567289 PSMB7Q99436 277 aa13.4□□□□□ -0.26
SIN3A-208ENST00000567289 TTC31Q49AM3 519 aaPredicted RBP13.4□□□□□ -0.26
SIN3A-208ENST00000567289 AMOTL1Q8IY63 956 aa13.4□□□□□ -0.26
SIN3A-208ENST00000567289 ATRIPQ8WXE1 791 aa13.4□□□□□ -0.26
SIN3A-208ENST00000567289 SUCLG2Q96I99 432 aa13.4□□□□□ -0.26
SIN3A-208ENST00000567289 SEPT11Q9NVA2 429 aaKnown RBP13.4□□□□□ -0.26
SIN3A-208ENST00000567289 NFE2L3Q9Y4A8 694 aa13.4□□□□□ -0.26
SIN3A-208ENST00000567289 NPATQ14207 1427 aa13.4□□□□□ -0.26
SIN3A-208ENST00000567289 ZSCAN20P17040 1043 aaPredicted RBP13.4□□□□□ -0.26
SIN3A-208ENST00000567289 MTIF2P46199 727 aaKnown RBP13.4□□□□□ -0.26
SIN3A-208ENST00000567289 CHMP4BP1P59074 171 aa13.4□□□□□ -0.26
SIN3A-208ENST00000567289 IFIT5Q13325 482 aaKnown RBP13.4□□□□□ -0.26
SIN3A-208ENST00000567289 WASF1Q92558 559 aa13.4□□□□□ -0.26
SIN3A-208ENST00000567289 VPS16Q9H269 839 aa13.4□□□□□ -0.26
SIN3A-208ENST00000567289 PAFAH1B1P43034 410 aa13.39□□□□□ -0.27
SIN3A-208ENST00000567289 ETF1P62495 437 aaKnown RBP13.39□□□□□ -0.27
SIN3A-208ENST00000567289 CCDC144BQ3MJ40 725 aa13.39□□□□□ -0.27
SIN3A-208ENST00000567289 MAATS1Q7Z4T9 603 aa13.39□□□□□ -0.27
SIN3A-208ENST00000567289 CEP131Q9UPN4 1083 aa13.39□□□□□ -0.27
SIN3A-208ENST00000567289 IDEP14735 1019 aa13.39□□□□□ -0.27
SIN3A-208ENST00000567289 PNOCQ13519 176 aa13.39□□□□□ -0.27
SIN3A-208ENST00000567289 CACNA2D4Q7Z3S7 1137 aa13.39□□□□□ -0.27
SIN3A-208ENST00000567289 ZSWIM6Q9HCJ5 1215 aa13.39□□□□□ -0.27
SIN3A-208ENST00000567289 TLR7Q9NYK1 1049 aaKnown RBP13.39□□□□□ -0.27
SIN3A-208ENST00000567289 G3V3G9 751 aa13.39□□□□□ -0.27
SIN3A-208ENST00000567289 DPCR1Q3MIW9 517 aa13.39□□□□□ -0.27
SIN3A-208ENST00000567289 SLC9C2Q5TAH2 1124 aa13.39□□□□□ -0.27
SIN3A-208ENST00000567289 DCAF8Q5TAQ9 597 aa13.39□□□□□ -0.27
SIN3A-208ENST00000567289 HELBQ8NG08 1087 aaPredicted RBP13.39□□□□□ -0.27
SIN3A-208ENST00000567289 SSH3Q8TE77 659 aa13.39□□□□□ -0.27
SIN3A-208ENST00000567289 PHF23Q9BUL5 403 aaPredicted RBP13.39□□□□□ -0.27
SIN3A-208ENST00000567289 UGGT1Q9NYU2 1555 aa13.39□□□□□ -0.27
SIN3A-208ENST00000567289 NFATC2IPQ8NCF5 419 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms