RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 ALDH8A1Q9H2A2 487 aaPredicted RBP27.78■■■□□ 2.04
LINC00543-201ENST00000567234 NIP7Q9Y221 180 aaKnown RBP eCLIP27.78■■■□□ 2.04
LINC00543-201ENST00000567234 MROH5Q6ZUA9 1318 aa27.77■■■□□ 2.04
LINC00543-201ENST00000567234 PDE8BO95263 885 aa27.77■■■□□ 2.04
LINC00543-201ENST00000567234 NOL8Q76FK4 1167 aaKnown RBP27.77■■■□□ 2.04
LINC00543-201ENST00000567234 MYH7P12883 1935 aa27.77■■■□□ 2.04
LINC00543-201ENST00000567234 ARAP2Q8WZ64 1704 aa27.77■■■□□ 2.04
LINC00543-201ENST00000567234 TNS1Q9HBL0 1735 aaKnown RBP27.77■■■□□ 2.04
LINC00543-201ENST00000567234 AKAP11Q9UKA4 1901 aa27.76■■■□□ 2.04
LINC00543-201ENST00000567234 RNF113AO15541 343 aaKnown RBP27.76■■■□□ 2.04
LINC00543-201ENST00000567234 TRIM44Q96DX7 344 aaPredicted RBP27.76■■■□□ 2.04
LINC00543-201ENST00000567234 SH2B1Q9NRF2 756 aaPredicted RBP27.76■■■□□ 2.04
LINC00543-201ENST00000567234 ZFYP08048 801 aaPredicted RBP27.76■■■□□ 2.03
LINC00543-201ENST00000567234 PANK2Q9BZ23 570 aa27.76■■■□□ 2.03
LINC00543-201ENST00000567234 PDCL3Q9H2J4 239 aa27.76■■■□□ 2.03
LINC00543-201ENST00000567234 C4BP0C0L5 1744 aa27.76■■■□□ 2.03
LINC00543-201ENST00000567234 DSCC1Q9BVC3 393 aa27.75■■■□□ 2.03
LINC00543-201ENST00000567234 ZMYND15Q9H091 742 aa27.75■■■□□ 2.03
LINC00543-201ENST00000567234 SCN7AQ01118 1682 aa27.74■■■□□ 2.03
LINC00543-201ENST00000567234 PKP1Q13835 747 aa27.74■■■□□ 2.03
LINC00543-201ENST00000567234 CCDC152Q4G0S7 254 aa27.74■■■□□ 2.03
LINC00543-201ENST00000567234 ZDHHC9Q9Y397 364 aa27.74■■■□□ 2.03
LINC00543-201ENST00000567234 HCLS1P14317 486 aaPredicted RBP27.74■■■□□ 2.03
LINC00543-201ENST00000567234 AMIGO3Q86WK7 504 aa27.74■■■□□ 2.03
LINC00543-201ENST00000567234 SEC62Q99442 399 aaKnown RBP27.74■■■□□ 2.03
LINC00543-201ENST00000567234 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.74■■■□□ 2.03
LINC00543-201ENST00000567234 ANKRD1Q15327 319 aa27.73■■■□□ 2.03
LINC00543-201ENST00000567234 BLOC1S2Q6QNY1 142 aa27.73■■■□□ 2.03
LINC00543-201ENST00000567234 FKBP4Q02790 459 aaKnown RBP eCLIP27.72■■■□□ 2.03
LINC00543-201ENST00000567234 PROM2Q8N271 834 aa27.72■■■□□ 2.03
LINC00543-201ENST00000567234 BRD1O95696 1058 aa27.71■■■□□ 2.03
LINC00543-201ENST00000567234 APBA3O96018 575 aa27.71■■■□□ 2.03
LINC00543-201ENST00000567234 CPA1P15085 419 aa27.71■■■□□ 2.03
LINC00543-201ENST00000567234 PUM3Q15397 648 aaKnown RBP27.71■■■□□ 2.03
LINC00543-201ENST00000567234 CCDC129Q6ZRS4 1044 aa27.71■■■□□ 2.03
LINC00543-201ENST00000567234 GNPATO15228 680 aa27.71■■■□□ 2.03
LINC00543-201ENST00000567234 CCDC173Q0VFZ6 552 aa27.71■■■□□ 2.03
LINC00543-201ENST00000567234 LPIN2Q92539 896 aa27.71■■■□□ 2.03
LINC00543-201ENST00000567234 RPS6KA4O75676 772 aa27.7■■■□□ 2.02
LINC00543-201ENST00000567234 FGFR2P21802 821 aa27.7■■■□□ 2.02
LINC00543-201ENST00000567234 RPS6KB1P23443 525 aa27.7■■■□□ 2.02
LINC00543-201ENST00000567234 CHGBP05060 677 aa27.69■■■□□ 2.02
LINC00543-201ENST00000567234 PPP1R9BQ96SB3 815 aa27.69■■■□□ 2.02
LINC00543-201ENST00000567234 MPHOSPH8Q99549 860 aa27.69■■■□□ 2.02
LINC00543-201ENST00000567234 UQCRFS1P1P0C7P4 283 aa27.69■■■□□ 2.02
LINC00543-201ENST00000567234 HS1BP3Q53T59 392 aa27.69■■■□□ 2.02
LINC00543-201ENST00000567234 MAP7D2Q96T17 732 aa27.69■■■□□ 2.02
LINC00543-201ENST00000567234 MAST3O60307 1309 aa27.68■■■□□ 2.02
LINC00543-201ENST00000567234 FAM177BA6PVY3 158 aa27.68■■■□□ 2.02
LINC00543-201ENST00000567234 ZAP70P43403 619 aa27.68■■■□□ 2.02
LINC00543-201ENST00000567234 SCARF1Q14162 830 aa27.68■■■□□ 2.02
LINC00543-201ENST00000567234 TTF1Q15361 905 aaPredicted RBP27.68■■■□□ 2.02
LINC00543-201ENST00000567234 TXNRD1Q16881 649 aa27.68■■■□□ 2.02
LINC00543-201ENST00000567234 ARID4AP29374 1257 aaPredicted RBP27.67■■■□□ 2.02
LINC00543-201ENST00000567234 IGHMBP2P38935 993 aaKnown RBP27.67■■■□□ 2.02
LINC00543-201ENST00000567234 NARFQ9UHQ1 456 aa27.67■■■□□ 2.02
LINC00543-201ENST00000567234 CYP21A2P08686 494 aa27.66■■■□□ 2.02
LINC00543-201ENST00000567234 SLC5A1P13866 664 aa27.66■■■□□ 2.02
LINC00543-201ENST00000567234 MCAMP43121 646 aa27.66■■■□□ 2.02
LINC00543-201ENST00000567234 SLC27A3Q5K4L6 730 aa27.66■■■□□ 2.02
LINC00543-201ENST00000567234 ZSCAN25Q6NSZ9 544 aa27.66■■■□□ 2.02
LINC00543-201ENST00000567234 NEK1Q96PY6 1258 aa27.66■■■□□ 2.02
LINC00543-201ENST00000567234 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.66■■■□□ 2.02
LINC00543-201ENST00000567234 WDR33Q9C0J8 1336 aaKnown RBP27.66■■■□□ 2.02
LINC00543-201ENST00000567234 C4AP0C0L4 1744 aa27.65■■■□□ 2.02
LINC00543-201ENST00000567234 APPBP2Q92624 585 aa27.65■■■□□ 2.02
LINC00543-201ENST00000567234 UBR3Q6ZT12 1888 aa27.65■■■□□ 2.02
LINC00543-201ENST00000567234 CASZ1Q86V15 1759 aa27.65■■■□□ 2.02
LINC00543-201ENST00000567234 HMGB1P09429 215 aaKnown RBP27.64■■■□□ 2.02
LINC00543-201ENST00000567234 HSPD1P10809 573 aaKnown RBP27.64■■■□□ 2.02
LINC00543-201ENST00000567234 CCDC102BQ68D86 513 aa27.64■■■□□ 2.02
LINC00543-201ENST00000567234 SEC31BQ9NQW1 1179 aa27.64■■■□□ 2.02
LINC00543-201ENST00000567234 TAF6LQ9Y6J9 622 aa27.64■■■□□ 2.02
LINC00543-201ENST00000567234 LAMA4Q16363 1823 aa27.64■■■□□ 2.02
LINC00543-201ENST00000567234 PLSCR1O15162 318 aa27.64■■■□□ 2.01
LINC00543-201ENST00000567234 SF3B3Q15393 1217 aaKnown RBP27.64■■■□□ 2.01
LINC00543-201ENST00000567234 OSBP2Q969R2 916 aa27.64■■■□□ 2.01
LINC00543-201ENST00000567234 CDC5LQ99459 802 aaKnown RBP27.64■■■□□ 2.01
LINC00543-201ENST00000567234 GZF1Q9H116 711 aaPredicted RBP27.64■■■□□ 2.01
LINC00543-201ENST00000567234 SMC3Q9UQE7 1217 aa27.64■■■□□ 2.01
LINC00543-201ENST00000567234 COL24A1Q17RW2 1714 aa27.64■■■□□ 2.01
LINC00543-201ENST00000567234 PHF14O94880 888 aa27.63■■■□□ 2.01
LINC00543-201ENST00000567234 SLC10A5Q5PT55 438 aa27.63■■■□□ 2.01
LINC00543-201ENST00000567234 MCTP1Q6DN14 999 aa27.63■■■□□ 2.01
LINC00543-201ENST00000567234 RTCBQ9Y3I0 505 aaKnown RBP27.63■■■□□ 2.01
LINC00543-201ENST00000567234 LARGE1O95461 756 aa27.62■■■□□ 2.01
LINC00543-201ENST00000567234 PDIA4P13667 645 aaKnown RBP27.62■■■□□ 2.01
LINC00543-201ENST00000567234 ME3Q16798 604 aa27.62■■■□□ 2.01
LINC00543-201ENST00000567234 M0R2C6 588 aa27.62■■■□□ 2.01
LINC00543-201ENST00000567234 SLFNL1Q499Z3 407 aa27.62■■■□□ 2.01
LINC00543-201ENST00000567234 NYXQ9GZU5 481 aa27.62■■■□□ 2.01
LINC00543-201ENST00000567234 BCL2L12Q9HB09 334 aa27.62■■■□□ 2.01
LINC00543-201ENST00000567234 SRP68Q9UHB9 627 aaKnown RBP27.62■■■□□ 2.01
LINC00543-201ENST00000567234 TPCN1Q9ULQ1 816 aa27.62■■■□□ 2.01
LINC00543-201ENST00000567234 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.61■■■□□ 2.01
LINC00543-201ENST00000567234 ANP32BQ92688 251 aaKnown RBP27.61■■■□□ 2.01
LINC00543-201ENST00000567234 LARP6Q9BRS8 491 aaKnown RBP27.61■■■□□ 2.01
LINC00543-201ENST00000567234 CTNNA3Q9UI47 895 aa27.61■■■□□ 2.01
LINC00543-201ENST00000567234 PHKA1P46020 1223 aa27.6■■■□□ 2.01
LINC00543-201ENST00000567234 TOB2Q14106 344 aaPredicted RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms