RNA–Protein interactions for RNA: ENST00000567133.1

CNOT1-210, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-210ENST00000567133 TMEM88BA6NKF7 163 aa13.8□□□□□ -0.2
CNOT1-210ENST00000567133 BCAR3O75815 825 aa13.8□□□□□ -0.2
CNOT1-210ENST00000567133 VIL1P09327 827 aaKnown RBP13.8□□□□□ -0.2
CNOT1-210ENST00000567133 RSBN1LQ6PCB5 846 aaPredicted RBP13.8□□□□□ -0.2
CNOT1-210ENST00000567133 ANKRD44Q8N8A2 993 aa13.8□□□□□ -0.2
CNOT1-210ENST00000567133 PUS3Q9BZE2 481 aaKnown RBP13.8□□□□□ -0.2
CNOT1-210ENST00000567133 API5Q9BZZ5 524 aaKnown RBP13.8□□□□□ -0.2
CNOT1-210ENST00000567133 ABT1Q9ULW3 272 aaKnown RBP13.8□□□□□ -0.2
CNOT1-210ENST00000567133 RPS12P25398 132 aaKnown RBP13.79□□□□□ -0.2
CNOT1-210ENST00000567133 KIF4BQ2VIQ3 1234 aa13.79□□□□□ -0.2
CNOT1-210ENST00000567133 DLK2Q6UY11 383 aa13.79□□□□□ -0.2
CNOT1-210ENST00000567133 PODNQ7Z5L7 613 aa13.79□□□□□ -0.2
CNOT1-210ENST00000567133 KLHDC4Q8TBB5 520 aa13.79□□□□□ -0.2
CNOT1-210ENST00000567133 DPF2Q92785 391 aa13.79□□□□□ -0.2
CNOT1-210ENST00000567133 TNNQ9UQP3 1299 aa13.79□□□□□ -0.2
CNOT1-210ENST00000567133 JAG2Q9Y219 1238 aa13.79□□□□□ -0.2
CNOT1-210ENST00000567133 UTYO14607 1347 aa13.79□□□□□ -0.2
CNOT1-210ENST00000567133 PSME4Q14997 1843 aa13.78□□□□□ -0.2
CNOT1-210ENST00000567133 UBTFL1P0CB47 393 aaPredicted RBP13.78□□□□□ -0.2
CNOT1-210ENST00000567133 GRM1Q13255 1194 aa13.78□□□□□ -0.2
CNOT1-210ENST00000567133 LRRC24Q50LG9 513 aa13.78□□□□□ -0.2
CNOT1-210ENST00000567133 PAXIP1Q6ZW49 1069 aaPredicted RBP13.78□□□□□ -0.2
CNOT1-210ENST00000567133 CLUAP1Q96AJ1 413 aa13.78□□□□□ -0.2
CNOT1-210ENST00000567133 COA1Q9GZY4 146 aa13.78□□□□□ -0.2
CNOT1-210ENST00000567133 KIF16BQ96L93 1317 aa13.78□□□□□ -0.2
CNOT1-210ENST00000567133 ASTN2O75129 1339 aaPredicted RBP13.77□□□□□ -0.21
CNOT1-210ENST00000567133 POLR2AP24928 1970 aaKnown RBP13.77□□□□□ -0.21
CNOT1-210ENST00000567133 GTF2IP78347 998 aa13.77□□□□□ -0.21
CNOT1-210ENST00000567133 USP48Q86UV5 1035 aa13.77□□□□□ -0.21
CNOT1-210ENST00000567133 TRPM7Q96QT4 1865 aa13.76□□□□□ -0.21
CNOT1-210ENST00000567133 ADM5C9JUS6 153 aa13.76□□□□□ -0.21
CNOT1-210ENST00000567133 CELF2O95319 508 aaKnown RBP13.76□□□□□ -0.21
CNOT1-210ENST00000567133 USP17L8P0C7I0 530 aa13.76□□□□□ -0.21
CNOT1-210ENST00000567133 RABL6Q3YEC7 729 aaPredicted RBP13.76□□□□□ -0.21
CNOT1-210ENST00000567133 METTL24Q5JXM2 366 aa13.76□□□□□ -0.21
CNOT1-210ENST00000567133 TTLL5Q6EMB2 1281 aa13.76□□□□□ -0.21
CNOT1-210ENST00000567133 ZNF804AQ7Z570 1209 aa13.76□□□□□ -0.21
CNOT1-210ENST00000567133 AGBL3Q8NEM8 1001 aa13.76□□□□□ -0.21
CNOT1-210ENST00000567133 MEIS3Q99687 375 aa13.76□□□□□ -0.21
CNOT1-210ENST00000567133 CD209Q9NNX6 404 aa13.76□□□□□ -0.21
CNOT1-210ENST00000567133 GGA3Q9NZ52 723 aa13.76□□□□□ -0.21
CNOT1-210ENST00000567133 SCAF8Q9UPN6 1271 aaKnown RBP13.76□□□□□ -0.21
CNOT1-210ENST00000567133 LRRFIP2Q9Y608 721 aaKnown RBP13.76□□□□□ -0.21
CNOT1-210ENST00000567133 IPO8O15397 1037 aaKnown RBP13.75□□□□□ -0.21
CNOT1-210ENST00000567133 BRPF1P55201 1214 aaPredicted RBP13.75□□□□□ -0.21
CNOT1-210ENST00000567133 DACT2Q5SW24 774 aa13.75□□□□□ -0.21
CNOT1-210ENST00000567133 KRT26Q7Z3Y9 468 aa13.75□□□□□ -0.21
CNOT1-210ENST00000567133 KIAA0825Q8IV33 1275 aa13.75□□□□□ -0.21
CNOT1-210ENST00000567133 DCPSQ96C86 337 aaKnown RBP13.75□□□□□ -0.21
CNOT1-210ENST00000567133 SIL1Q9H173 461 aa13.75□□□□□ -0.21
CNOT1-210ENST00000567133 MYOZ2Q9NPC6 264 aa13.75□□□□□ -0.21
CNOT1-210ENST00000567133 CNTNAP1P78357 1384 aa13.74□□□□□ -0.21
CNOT1-210ENST00000567133 ZBED9Q6R2W3 1325 aa13.74□□□□□ -0.21
CNOT1-210ENST00000567133 MROH5Q6ZUA9 1318 aa13.74□□□□□ -0.21
CNOT1-210ENST00000567133 F8W031 263 aaPredicted RBP13.74□□□□□ -0.21
CNOT1-210ENST00000567133 TRIM27P14373 513 aa13.74□□□□□ -0.21
CNOT1-210ENST00000567133 GYG1P46976 350 aa13.74□□□□□ -0.21
CNOT1-210ENST00000567133 SCARF1Q14162 830 aa13.74□□□□□ -0.21
CNOT1-210ENST00000567133 STRIP1Q5VSL9 837 aa13.74□□□□□ -0.21
CNOT1-210ENST00000567133 CST9Q5W186 159 aa13.74□□□□□ -0.21
CNOT1-210ENST00000567133 CDC37L1Q7L3B6 337 aa13.74□□□□□ -0.21
CNOT1-210ENST00000567133 ZC3H15Q8WU90 426 aaKnown RBP13.74□□□□□ -0.21
CNOT1-210ENST00000567133 IQSEC3Q9UPP2 1182 aaPredicted RBP13.74□□□□□ -0.21
CNOT1-210ENST00000567133 RIPOR2Q9Y4F9 1068 aa13.74□□□□□ -0.21
CNOT1-210ENST00000567133 SASH1O94885 1247 aa13.73□□□□□ -0.21
CNOT1-210ENST00000567133 VEGFBP49765 207 aa13.73□□□□□ -0.21
CNOT1-210ENST00000567133 ZNF280AP59817 542 aaPredicted RBP13.73□□□□□ -0.21
CNOT1-210ENST00000567133 DEFB115Q30KQ5 88 aa13.73□□□□□ -0.21
CNOT1-210ENST00000567133 ANGEL2Q5VTE6 544 aaKnown RBP13.73□□□□□ -0.21
CNOT1-210ENST00000567133 ATF7IPQ6VMQ6 1270 aa13.73□□□□□ -0.21
CNOT1-210ENST00000567133 VPS37DQ86XT2 251 aa13.73□□□□□ -0.21
CNOT1-210ENST00000567133 SULF1Q8IWU6 871 aa13.73□□□□□ -0.21
CNOT1-210ENST00000567133 OGFOD1Q8N543 542 aa13.73□□□□□ -0.21
CNOT1-210ENST00000567133 GMLQ99445 158 aa13.73□□□□□ -0.21
CNOT1-210ENST00000567133 PGAP2Q9UHJ9 254 aa13.73□□□□□ -0.21
CNOT1-210ENST00000567133 ZNF646O15015 1829 aaPredicted RBP13.73□□□□□ -0.21
CNOT1-210ENST00000567133 IRS2Q9Y4H2 1338 aa13.72□□□□□ -0.21
CNOT1-210ENST00000567133 POTEDQ86YR6 584 aa13.72□□□□□ -0.21
CNOT1-210ENST00000567133 JMYQ8N9B5 988 aa13.72□□□□□ -0.21
CNOT1-210ENST00000567133 ARHGAP45Q92619 1136 aa13.72□□□□□ -0.21
CNOT1-210ENST00000567133 PA2G4Q9UQ80 394 aaKnown RBP13.72□□□□□ -0.21
CNOT1-210ENST00000567133 MYO3BQ8WXR4 1341 aa13.71□□□□□ -0.21
CNOT1-210ENST00000567133 FRAT2O75474 233 aaPredicted RBP13.71□□□□□ -0.21
CNOT1-210ENST00000567133 HSPA1AP0DMV8 641 aaKnown RBP13.71□□□□□ -0.21
CNOT1-210ENST00000567133 HSPA1BP0DMV9 641 aaKnown RBP13.71□□□□□ -0.21
CNOT1-210ENST00000567133 HIBADHP31937 336 aaKnown RBP13.71□□□□□ -0.21
CNOT1-210ENST00000567133 RFX5P48382 616 aaPredicted RBP13.71□□□□□ -0.21
CNOT1-210ENST00000567133 CHAF1AQ13111 956 aaPredicted RBP13.71□□□□□ -0.21
CNOT1-210ENST00000567133 UBE4AQ14139 1066 aa13.71□□□□□ -0.21
CNOT1-210ENST00000567133 NBPF9Q3BBW0 867 aa13.71□□□□□ -0.21
CNOT1-210ENST00000567133 ZKSCAN2Q63HK3 967 aa13.71□□□□□ -0.21
CNOT1-210ENST00000567133 INTS3Q68E01 1043 aaKnown RBP13.71□□□□□ -0.21
CNOT1-210ENST00000567133 CYP4F22Q6NT55 531 aa13.71□□□□□ -0.21
CNOT1-210ENST00000567133 C15orf52Q6ZUT6 534 aaKnown RBP13.71□□□□□ -0.21
CNOT1-210ENST00000567133 CERS5Q8N5B7 392 aa13.71□□□□□ -0.21
CNOT1-210ENST00000567133 HDAC9Q9UKV0 1011 aa13.71□□□□□ -0.21
CNOT1-210ENST00000567133 EYA2O00167 538 aa13.7□□□□□ -0.22
CNOT1-210ENST00000567133 IL1R1P14778 569 aa13.7□□□□□ -0.22
CNOT1-210ENST00000567133 PTPN12Q05209 780 aaKnown RBP13.7□□□□□ -0.22
CNOT1-210ENST00000567133 PRAMEF18Q5VWM3 479 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms