RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 APOBEC3FQ8IUX4 373 aaKnown RBP12.9□□□□□ -0.34
CAPN3-216ENST00000567071 OGFOD1Q8N543 542 aa12.9□□□□□ -0.34
CAPN3-216ENST00000567071 SYMPKQ92797 1274 aaKnown RBP12.9□□□□□ -0.34
CAPN3-216ENST00000567071 ZFYVE28Q9HCC9 887 aa12.9□□□□□ -0.34
CAPN3-216ENST00000567071 POLLQ9UGP5 575 aa12.9□□□□□ -0.34
CAPN3-216ENST00000567071 RPTORQ8N122 1335 aa12.89□□□□□ -0.35
CAPN3-216ENST00000567071 PPP1R12BO60237 982 aaPredicted RBP12.89□□□□□ -0.35
CAPN3-216ENST00000567071 FARP2O94887 1054 aaPredicted RBP12.89□□□□□ -0.35
CAPN3-216ENST00000567071 GNRH1P01148 92 aa12.89□□□□□ -0.35
CAPN3-216ENST00000567071 MYL6BP14649 208 aa12.89□□□□□ -0.35
CAPN3-216ENST00000567071 NBPF9Q3BBW0 867 aa12.89□□□□□ -0.35
CAPN3-216ENST00000567071 PANK3Q9H999 370 aa12.89□□□□□ -0.35
CAPN3-216ENST00000567071 PSME4Q14997 1843 aa12.88□□□□□ -0.35
CAPN3-216ENST00000567071 UNCXA6NJT0 531 aa12.88□□□□□ -0.35
CAPN3-216ENST00000567071 U2SURPO15042 1029 aaKnown RBP12.88□□□□□ -0.35
CAPN3-216ENST00000567071 GJB1P08034 283 aa12.88□□□□□ -0.35
CAPN3-216ENST00000567071 BMP8BP34820 402 aa12.88□□□□□ -0.35
CAPN3-216ENST00000567071 GJA8P48165 433 aa12.88□□□□□ -0.35
CAPN3-216ENST00000567071 GPSM2P81274 684 aa12.88□□□□□ -0.35
CAPN3-216ENST00000567071 TAF1CQ15572 869 aaPredicted RBP12.88□□□□□ -0.35
CAPN3-216ENST00000567071 LRIT3Q3SXY7 679 aa12.88□□□□□ -0.35
CAPN3-216ENST00000567071 KNSTRNQ9Y448 316 aa12.88□□□□□ -0.35
CAPN3-216ENST00000567071 CAP1Q01518 475 aa12.87□□□□□ -0.35
CAPN3-216ENST00000567071 UBE2Q1Q7Z7E8 422 aa12.87□□□□□ -0.35
CAPN3-216ENST00000567071 TBC1D16Q8TBP0 767 aa12.87□□□□□ -0.35
CAPN3-216ENST00000567071 USP17L3A6NCW0 530 aa12.86□□□□□ -0.35
CAPN3-216ENST00000567071 USP17L4A6NCW7 530 aa12.86□□□□□ -0.35
CAPN3-216ENST00000567071 MTFR1Q15390 333 aa12.86□□□□□ -0.35
CAPN3-216ENST00000567071 USP17L1Q7RTZ2 530 aa12.86□□□□□ -0.35
CAPN3-216ENST00000567071 GMLQ99445 158 aa12.86□□□□□ -0.35
CAPN3-216ENST00000567071 BIN2Q9UBW5 565 aaPredicted RBP12.86□□□□□ -0.35
CAPN3-216ENST00000567071 TRMT112Q9UI30 125 aaKnown RBP12.86□□□□□ -0.35
CAPN3-216ENST00000567071 SH3TC1Q8TE82 1336 aa12.86□□□□□ -0.35
CAPN3-216ENST00000567071 SPTBN5Q9NRC6 3674 aaKnown RBP12.85□□□□□ -0.35
CAPN3-216ENST00000567071 COL1A1P02452 1464 aaPredicted RBP12.85□□□□□ -0.35
CAPN3-216ENST00000567071 WNT10BO00744 389 aa12.85□□□□□ -0.35
CAPN3-216ENST00000567071 UFL1O94874 794 aa12.85□□□□□ -0.35
CAPN3-216ENST00000567071 UBXN2AP68543 259 aa12.85□□□□□ -0.35
CAPN3-216ENST00000567071 MAP3K11Q16584 847 aa12.85□□□□□ -0.35
CAPN3-216ENST00000567071 HSP90AB3PQ58FF7 597 aa12.85□□□□□ -0.35
CAPN3-216ENST00000567071 CLMNQ96JQ2 1002 aa12.85□□□□□ -0.35
CAPN3-216ENST00000567071 RNF208Q9H0X6 261 aa12.85□□□□□ -0.35
CAPN3-216ENST00000567071 ANKIB1Q9P2G1 1089 aa12.85□□□□□ -0.35
CAPN3-216ENST00000567071 TESPA1A2RU30 521 aaPredicted RBP12.84□□□□□ -0.35
CAPN3-216ENST00000567071 CCL5P13501 91 aa12.84□□□□□ -0.35
CAPN3-216ENST00000567071 CAPN2P17655 700 aa12.84□□□□□ -0.35
CAPN3-216ENST00000567071 IREB2P48200 963 aaKnown RBP12.84□□□□□ -0.35
CAPN3-216ENST00000567071 MMP14P50281 582 aa12.84□□□□□ -0.35
CAPN3-216ENST00000567071 BCAMP50895 628 aa12.84□□□□□ -0.35
CAPN3-216ENST00000567071 TDHQ8IZJ6 230 aa12.84□□□□□ -0.35
CAPN3-216ENST00000567071 GDF15Q99988 308 aa12.84□□□□□ -0.35
CAPN3-216ENST00000567071 GGA1Q9UJY5 639 aa12.84□□□□□ -0.35
CAPN3-216ENST00000567071 HOXD10P28358 340 aa12.83□□□□□ -0.36
CAPN3-216ENST00000567071 GRK4P32298 578 aa12.83□□□□□ -0.36
CAPN3-216ENST00000567071 MCM10Q7L590 875 aa12.83□□□□□ -0.36
CAPN3-216ENST00000567071 RAET1EQ8TD07 263 aa12.83□□□□□ -0.36
CAPN3-216ENST00000567071 CELF1Q92879 486 aaKnown RBP12.83□□□□□ -0.36
CAPN3-216ENST00000567071 PTPN18Q99952 460 aa12.83□□□□□ -0.36
CAPN3-216ENST00000567071 MYO3BQ8WXR4 1341 aa12.83□□□□□ -0.36
CAPN3-216ENST00000567071 IRS2Q9Y4H2 1338 aa12.83□□□□□ -0.36
CAPN3-216ENST00000567071 ZBTB22O15209 634 aa12.82□□□□□ -0.36
CAPN3-216ENST00000567071 SASH1O94885 1247 aa12.82□□□□□ -0.36
CAPN3-216ENST00000567071 DSG3P32926 999 aa12.82□□□□□ -0.36
CAPN3-216ENST00000567071 LACTBP83111 547 aaPredicted RBP12.82□□□□□ -0.36
CAPN3-216ENST00000567071 TAF7Q15545 349 aaPredicted RBP12.82□□□□□ -0.36
CAPN3-216ENST00000567071 SUPT20HL1Q3ZLR7 823 aa12.82□□□□□ -0.36
CAPN3-216ENST00000567071 PODNQ7Z5L7 613 aa12.82□□□□□ -0.36
CAPN3-216ENST00000567071 U2AF1L4Q8WU68 220 aaKnown RBP12.82□□□□□ -0.36
CAPN3-216ENST00000567071 TRIM47Q96LD4 638 aa12.82□□□□□ -0.36
CAPN3-216ENST00000567071 PODXL2Q9NZ53 605 aa12.82□□□□□ -0.36
CAPN3-216ENST00000567071 FZD1Q9UP38 647 aa12.82□□□□□ -0.36
CAPN3-216ENST00000567071 NLRP10Q86W26 655 aa12.81□□□□□ -0.36
CAPN3-216ENST00000567071 ANKRD13AQ8IZ07 590 aa12.81□□□□□ -0.36
CAPN3-216ENST00000567071 PPP2R3BQ9Y5P8 575 aa12.81□□□□□ -0.36
CAPN3-216ENST00000567071 CCL15-CCL14A0A0B4J2E2 113 aa12.8□□□□□ -0.36
CAPN3-216ENST00000567071 RPS8P62241 208 aaKnown RBP12.8□□□□□ -0.36
CAPN3-216ENST00000567071 CCL15Q16663 113 aa12.8□□□□□ -0.36
CAPN3-216ENST00000567071 FBXW7Q969H0 707 aa12.8□□□□□ -0.36
CAPN3-216ENST00000567071 ARHGAP39Q9C0H5 1083 aa12.8□□□□□ -0.36
CAPN3-216ENST00000567071 DEFB129Q9H1M3 183 aa12.8□□□□□ -0.36
CAPN3-216ENST00000567071 RAPGEFL1Q9UHV5 662 aa12.8□□□□□ -0.36
CAPN3-216ENST00000567071 RIPOR2Q9Y4F9 1068 aa12.8□□□□□ -0.36
CAPN3-216ENST00000567071 TMEM265A0A087WTH1 108 aa12.79□□□□□ -0.36
CAPN3-216ENST00000567071 TNFRSF10AO00220 468 aa12.79□□□□□ -0.36
CAPN3-216ENST00000567071 TFRCP02786 760 aaKnown RBP12.79□□□□□ -0.36
CAPN3-216ENST00000567071 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-216ENST00000567071 GJA5P36382 358 aa12.79□□□□□ -0.36
CAPN3-216ENST00000567071 GTF2A2P52657 109 aa12.79□□□□□ -0.36
CAPN3-216ENST00000567071 FAM109BQ6ICB4 259 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-216ENST00000567071 C7orf61Q8IZ16 206 aa12.79□□□□□ -0.36
CAPN3-216ENST00000567071 HELBQ8NG08 1087 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-216ENST00000567071 PNISRQ8TF01 805 aaKnown RBP12.79□□□□□ -0.36
CAPN3-216ENST00000567071 OPTNQ96CV9 577 aa12.79□□□□□ -0.36
CAPN3-216ENST00000567071 UBE2OQ9C0C9 1292 aaKnown RBP12.79□□□□□ -0.36
CAPN3-216ENST00000567071 FOXD4L1Q9NU39 408 aa12.79□□□□□ -0.36
CAPN3-216ENST00000567071 SRRDQ9UH36 339 aa12.79□□□□□ -0.36
CAPN3-216ENST00000567071 ZSWIM8A7E2V4 1837 aa12.78□□□□□ -0.36
CAPN3-216ENST00000567071 TLR2O60603 784 aa12.78□□□□□ -0.36
CAPN3-216ENST00000567071 ECM2O94769 699 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-216ENST00000567071 SGPL1O95470 568 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms